RNA–Protein interactions for RNA: ENST00000380680.4

UBL3-201, Transcript of ubiquitin like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBL3, Length 4,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3-201ENST00000380680 FAT1Q14517 4588 aa8.56□□□□□ -1.04
UBL3-201ENST00000380680 KRTAP10-10P60014 251 aa8.56□□□□□ -1.04
UBL3-201ENST00000380680 KRTAP12-1P59990 96 aa8.54□□□□□ -1.04
UBL3-201ENST00000380680 ALMS1Q8TCU4 4167 aa8.53□□□□□ -1.04
UBL3-201ENST00000380680 KMT2AQ03164 3969 aa8.51□□□□□ -1.05
UBL3-201ENST00000380680 LRP1BQ9NZR2 4599 aa8.51□□□□□ -1.05
UBL3-201ENST00000380680 A0A0A0MQY5 61 aa8.51□□□□□ -1.05
UBL3-201ENST00000380680 KRTAP3-3Q9BYR6 98 aa8.5□□□□□ -1.05
UBL3-201ENST00000380680 DYNC1H1Q14204 4646 aaKnown RBP8.49□□□□□ -1.05
UBL3-201ENST00000380680 PP632Q6XCG6 107 aa8.49□□□□□ -1.05
UBL3-201ENST00000380680 DNAH2Q9P225 4427 aa8.49□□□□□ -1.05
UBL3-201ENST00000380680 DNAH3Q8TD57 4116 aa8.43□□□□□ -1.06
UBL3-201ENST00000380680 KRTAP3-2Q9BYR7 98 aa8.42□□□□□ -1.06
UBL3-201ENST00000380680 DNAH8Q96JB1 4490 aa8.41□□□□□ -1.06
UBL3-201ENST00000380680 LYSTQ99698 3801 aa8.37□□□□□ -1.07
UBL3-201ENST00000380680 CMYA5Q8N3K9 4069 aa8.35□□□□□ -1.07
UBL3-201ENST00000380680 DYNC2H1Q8NCM8 4307 aaKnown RBP8.25□□□□□ -1.09
UBL3-201ENST00000380680 RYR1P21817 5038 aa8.23□□□□□ -1.09
UBL3-201ENST00000380680 KIAA1109Q2LD37 5005 aa8.2□□□□□ -1.1
UBL3-201ENST00000380680 VPS13BQ7Z7G8 4022 aa8.2□□□□□ -1.1
UBL3-201ENST00000380680 DNAH7Q8WXX0 4024 aa8.2□□□□□ -1.1
UBL3-201ENST00000380680 SACSQ9NZJ4 4579 aa8.15□□□□□ -1.1
UBL3-201ENST00000380680 MYCBP2O75592 4640 aa8.15□□□□□ -1.11
UBL3-201ENST00000380680 FAT2Q9NYQ8 4349 aa8.14□□□□□ -1.11
UBL3-201ENST00000380680 DNAH6Q9C0G6 4158 aa8.13□□□□□ -1.11
UBL3-201ENST00000380680 FRAS1Q86XX4 4008 aa8.11□□□□□ -1.11
UBL3-201ENST00000380680 PRO2289Q9P1D8 64 aa8.1□□□□□ -1.11
UBL3-201ENST00000380680 HECTD4Q9Y4D8 3996 aa8.09□□□□□ -1.11
UBL3-201ENST00000380680 RYR3Q15413 4870 aa8.04□□□□□ -1.12
UBL3-201ENST00000380680 APOBP04114 4563 aaKnown RBP8.02□□□□□ -1.12
UBL3-201ENST00000380680 LRP1Q07954 4544 aaKnown RBP8.01□□□□□ -1.13
UBL3-201ENST00000380680 HYDINQ4G0P3 5121 aa7.99□□□□□ -1.13
UBL3-201ENST00000380680 LORP23490 312 aaPredicted RBP7.99□□□□□ -1.13
UBL3-201ENST00000380680 KRTAP4-1Q9BYQ7 146 aa7.93□□□□□ -1.14
UBL3-201ENST00000380680 FAT3Q8TDW7 4589 aa7.91□□□□□ -1.14
UBL3-201ENST00000380680 KRTAP17-1Q9BYP8 105 aa7.9□□□□□ -1.14
UBL3-201ENST00000380680 PKHD1P08F94 4074 aa7.87□□□□□ -1.15
UBL3-201ENST00000380680 RYR2Q92736 4967 aa7.83□□□□□ -1.16
UBL3-201ENST00000380680 KMT2CQ8NEZ4 4911 aaKnown RBP7.67□□□□□ -1.18
UBL3-201ENST00000380680 KRTAP15-1Q3LI76 137 aa7.66□□□□□ -1.18
UBL3-201ENST00000380680 LRP2P98164 4655 aa7.64□□□□□ -1.19
UBL3-201ENST00000380680 HERC2O95714 4834 aa7.6□□□□□ -1.19
UBL3-201ENST00000380680 PKD1P98161 4303 aa7.6□□□□□ -1.19
UBL3-201ENST00000380680 HSPG2P98160 4391 aa7.53□□□□□ -1.2
UBL3-201ENST00000380680 KRTAP10-12P60413 245 aa7.52□□□□□ -1.21
UBL3-201ENST00000380680 MT1HP80294 61 aa7.47□□□□□ -1.21
UBL3-201ENST00000380680 LCE3AQ5TA76 89 aa7.43□□□□□ -1.22
UBL3-201ENST00000380680 KRTAP23-1A1A580 65 aa7.39□□□□□ -1.23
UBL3-201ENST00000380680 MT2AP02795 61 aa7.38□□□□□ -1.23
UBL3-201ENST00000380680 KRTAP12-3P60328 96 aa7.36□□□□□ -1.23
UBL3-201ENST00000380680 SPRR2GQ9BYE4 73 aa7.34□□□□□ -1.24
UBL3-201ENST00000380680 MT1FP04733 61 aa7.29□□□□□ -1.24
UBL3-201ENST00000380680 LPAP08519 4548 aa7.27□□□□□ -1.25
UBL3-201ENST00000380680 BIRC6Q9NR09 4857 aa7.25□□□□□ -1.25
UBL3-201ENST00000380680 EPPK1P58107 5090 aaKnown RBP7.23□□□□□ -1.25
UBL3-201ENST00000380680 TNXBP22105 4242 aa7.14□□□□□ -1.27
UBL3-201ENST00000380680 ABCA13Q86UQ4 5058 aa7.12□□□□□ -1.27
UBL3-201ENST00000380680 KRTAP19-1Q8IUB9 90 aa7.12□□□□□ -1.27
UBL3-201ENST00000380680 PKHD1L1Q86WI1 4243 aa7.12□□□□□ -1.27
UBL3-201ENST00000380680 PCLOQ9Y6V0 5065 aa7.09□□□□□ -1.27
UBL3-201ENST00000380680 HERC1Q15751 4861 aa7.08□□□□□ -1.28
UBL3-201ENST00000380680 LCE2CQ5TA81 110 aa7.01□□□□□ -1.29
UBL3-201ENST00000380680 CRCT1Q9UGL9 99 aa6.95□□□□□ -1.3
UBL3-201ENST00000380680 KRTAP19-2Q3LHN2 52 aa6.92□□□□□ -1.3
UBL3-201ENST00000380680 KRTAP19-8Q3LI54 63 aa6.91□□□□□ -1.3
UBL3-201ENST00000380680 KRTAP9-8Q9BYQ0 159 aa6.9□□□□□ -1.3
UBL3-201ENST00000380680 KRTAP8-1Q8IUC2 63 aa6.87□□□□□ -1.31
UBL3-201ENST00000380680 MUC17Q685J3 4493 aa6.86□□□□□ -1.31
UBL3-201ENST00000380680 INE1O15225 51 aa6.81□□□□□ -1.32
UBL3-201ENST00000380680 MT1BP07438 61 aa6.79□□□□□ -1.32
UBL3-201ENST00000380680 KRTAP10-7P60409 375 aaPredicted RBP6.77□□□□□ -1.33
UBL3-201ENST00000380680 MT1XP80297 61 aa6.76□□□□□ -1.33
UBL3-201ENST00000380680 KRTAP19-5Q3LI72 72 aa6.76□□□□□ -1.33
UBL3-201ENST00000380680 FLGP20930 4061 aaPredicted RBP6.76□□□□□ -1.33
UBL3-201ENST00000380680 KRTAP10-5P60370 271 aa6.71□□□□□ -1.33
UBL3-201ENST00000380680 MUC2Q02817 5179 aa6.69□□□□□ -1.34
UBL3-201ENST00000380680 KRTAP9-3Q9BYQ3 159 aa6.67□□□□□ -1.34
UBL3-201ENST00000380680 RNF213Q63HN8 5207 aa6.65□□□□□ -1.35
UBL3-201ENST00000380680 FAT4Q6V0I7 4981 aa6.59□□□□□ -1.35
UBL3-201ENST00000380680 LCE3CQ5T5A8 94 aa6.57□□□□□ -1.36
UBL3-201ENST00000380680 UBR4Q5T4S7 5183 aa6.54□□□□□ -1.36
UBL3-201ENST00000380680 HMCN2Q8NDA2 5059 aa6.5□□□□□ -1.37
UBL3-201ENST00000380680 KRTAP4-8A0A0G2JLE6 195 aa6.48□□□□□ -1.37
UBL3-201ENST00000380680 KRTAP4-8Q9BYQ9 185 aa6.48□□□□□ -1.37
UBL3-201ENST00000380680 LCE2BO14633 110 aa6.44□□□□□ -1.38
UBL3-201ENST00000380680 SPRR2FQ96RM1 72 aa6.44□□□□□ -1.38
UBL3-201ENST00000380680 FSIP2Q5CZC0 6907 aa6.42□□□□□ -1.38
UBL3-201ENST00000380680 SPRR5A0A1B0GTR4 108 aa6.38□□□□□ -1.39
UBL3-201ENST00000380680 KRTAP19-4Q3LI73 84 aa6.28□□□□□ -1.4
UBL3-201ENST00000380680 LCE2AQ5TA79 106 aaPredicted RBP6.14□□□□□ -1.43
UBL3-201ENST00000380680 KRTAP4-7Q9BYR0 210 aa6.09□□□□□ -1.43
UBL3-201ENST00000380680 MT1GP13640 62 aa6.07□□□□□ -1.44
UBL3-201ENST00000380680 MT1LQ93083 61 aa6□□□□□ -1.45
UBL3-201ENST00000380680 MT1EP04732 61 aa5.99□□□□□ -1.45
UBL3-201ENST00000380680 SYNE1Q8NF91 8797 aaKnown RBP5.93□□□□□ -1.46
UBL3-201ENST00000380680 SPRR2EP22531 72 aa5.92□□□□□ -1.46
UBL3-201ENST00000380680 SPRR2BP35325 72 aa5.92□□□□□ -1.46
UBL3-201ENST00000380680 SPRR2AP35326 72 aa5.92□□□□□ -1.46
UBL3-201ENST00000380680 KRTAP19-6Q3LI70 58 aa5.92□□□□□ -1.46
UBL3-201ENST00000380680 KRTAP19-3Q7Z4W3 81 aa5.9□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms