RNA–Protein interactions for RNA: ENST00000380486.3

C2CD2-202, Transcript of C2 calcium dependent domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C2CD2, Length 6,345 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD2-202ENST00000380486 KRTAP10-4P60372 401 aaPredicted RBP8.04□□□□□ -1.12
C2CD2-202ENST00000380486 AKAP9Q99996 3911 aa8.02□□□□□ -1.13
C2CD2-202ENST00000380486 COL7A1Q02388 2944 aa8.02□□□□□ -1.13
C2CD2-202ENST00000380486 OTOGQ6ZRI0 2925 aa7.96□□□□□ -1.14
C2CD2-202ENST00000380486 KRTAP23-1A1A580 65 aa7.83□□□□□ -1.16
C2CD2-202ENST00000380486 DNAH1Q9P2D7 4330 aa7.68□□□□□ -1.18
C2CD2-202ENST00000380486 KRTAP4-1Q9BYQ7 146 aa7.66□□□□□ -1.18
C2CD2-202ENST00000380486 DNAH9Q9NYC9 4486 aa7.65□□□□□ -1.18
C2CD2-202ENST00000380486 SPRR2FQ96RM1 72 aa7.64□□□□□ -1.19
C2CD2-202ENST00000380486 DNAH2Q9P225 4427 aa7.58□□□□□ -1.2
C2CD2-202ENST00000380486 MT1HP80294 61 aa7.58□□□□□ -1.2
C2CD2-202ENST00000380486 DNAH10Q8IVF4 4471 aa7.57□□□□□ -1.2
C2CD2-202ENST00000380486 KRTAP10-7P60409 375 aaPredicted RBP7.55□□□□□ -1.2
C2CD2-202ENST00000380486 ZNF469Q96JG9 3925 aaPredicted RBP7.53□□□□□ -1.2
C2CD2-202ENST00000380486 KRTAP19-5Q3LI72 72 aa7.48□□□□□ -1.21
C2CD2-202ENST00000380486 DNAH8Q96JB1 4490 aa7.44□□□□□ -1.22
C2CD2-202ENST00000380486 DNAH5Q8TE73 4624 aa7.44□□□□□ -1.22
C2CD2-202ENST00000380486 DNAH3Q8TD57 4116 aa7.4□□□□□ -1.23
C2CD2-202ENST00000380486 MT2AP02795 61 aa7.39□□□□□ -1.23
C2CD2-202ENST00000380486 ANK2Q01484 3957 aa7.36□□□□□ -1.23
C2CD2-202ENST00000380486 PLECQ15149 4684 aaKnown RBP7.35□□□□□ -1.23
C2CD2-202ENST00000380486 DNAH11Q96DT5 4516 aa7.3□□□□□ -1.24
C2CD2-202ENST00000380486 LCE3CQ5T5A8 94 aa7.3□□□□□ -1.24
C2CD2-202ENST00000380486 MT1FP04733 61 aa7.3□□□□□ -1.24
C2CD2-202ENST00000380486 FRAS1Q86XX4 4008 aa7.29□□□□□ -1.24
C2CD2-202ENST00000380486 SPRR2EP22531 72 aa7.29□□□□□ -1.24
C2CD2-202ENST00000380486 SPRR2BP35325 72 aa7.29□□□□□ -1.24
C2CD2-202ENST00000380486 SPRR2AP35326 72 aa7.29□□□□□ -1.24
C2CD2-202ENST00000380486 DNAH17Q9UFH2 4485 aa7.23□□□□□ -1.25
C2CD2-202ENST00000380486 SPRR2GQ9BYE4 73 aa7.23□□□□□ -1.25
C2CD2-202ENST00000380486 FAT2Q9NYQ8 4349 aa7.17□□□□□ -1.26
C2CD2-202ENST00000380486 VPS13DQ5THJ4 4388 aa7.13□□□□□ -1.27
C2CD2-202ENST00000380486 LCE3BQ5TA77 95 aa7.11□□□□□ -1.27
C2CD2-202ENST00000380486 KMT2AQ03164 3969 aa7.09□□□□□ -1.28
C2CD2-202ENST00000380486 LRP1BQ9NZR2 4599 aa7.08□□□□□ -1.28
C2CD2-202ENST00000380486 STARD9Q9P2P6 4700 aa7.07□□□□□ -1.28
C2CD2-202ENST00000380486 FAT1Q14517 4588 aa7.05□□□□□ -1.28
C2CD2-202ENST00000380486 VPS13BQ7Z7G8 4022 aa7.05□□□□□ -1.28
C2CD2-202ENST00000380486 SPRR2DP22532 72 aa7.04□□□□□ -1.28
C2CD2-202ENST00000380486 DYNC2H1Q8NCM8 4307 aaKnown RBP7.02□□□□□ -1.29
C2CD2-202ENST00000380486 SACSQ9NZJ4 4579 aa6.98□□□□□ -1.29
C2CD2-202ENST00000380486 PRKDCP78527 4128 aaKnown RBP6.96□□□□□ -1.29
C2CD2-202ENST00000380486 DNAH7Q8WXX0 4024 aa6.95□□□□□ -1.3
C2CD2-202ENST00000380486 MT1GP13640 62 aa6.93□□□□□ -1.3
C2CD2-202ENST00000380486 DYNC1H1Q14204 4646 aaKnown RBP6.92□□□□□ -1.3
C2CD2-202ENST00000380486 CMYA5Q8N3K9 4069 aa6.92□□□□□ -1.3
C2CD2-202ENST00000380486 DNAH6Q9C0G6 4158 aa6.88□□□□□ -1.31
C2CD2-202ENST00000380486 LCE2BO14633 110 aa6.88□□□□□ -1.31
C2CD2-202ENST00000380486 APOBP04114 4563 aaKnown RBP6.81□□□□□ -1.32
C2CD2-202ENST00000380486 LYSTQ99698 3801 aa6.81□□□□□ -1.32
C2CD2-202ENST00000380486 KRTAP12-4P60329 112 aa6.8□□□□□ -1.32
C2CD2-202ENST00000380486 KRTAP4-8A0A0G2JLE6 195 aa6.71□□□□□ -1.34
C2CD2-202ENST00000380486 KRTAP4-8Q9BYQ9 185 aa6.71□□□□□ -1.34
C2CD2-202ENST00000380486 MT1XP80297 61 aa6.69□□□□□ -1.34
C2CD2-202ENST00000380486 KRTAP19-1Q8IUB9 90 aa6.66□□□□□ -1.34
C2CD2-202ENST00000380486 RYR1P21817 5038 aa6.63□□□□□ -1.35
C2CD2-202ENST00000380486 KRTAP17-1Q9BYP8 105 aa6.62□□□□□ -1.35
C2CD2-202ENST00000380486 HECTD4Q9Y4D8 3996 aa6.59□□□□□ -1.36
C2CD2-202ENST00000380486 KRTAP19-8Q3LI54 63 aa6.55□□□□□ -1.36
C2CD2-202ENST00000380486 FAT3Q8TDW7 4589 aa6.54□□□□□ -1.36
C2CD2-202ENST00000380486 DNHD1Q96M86 4753 aa6.53□□□□□ -1.36
C2CD2-202ENST00000380486 LCE2CQ5TA81 110 aa6.51□□□□□ -1.37
C2CD2-202ENST00000380486 MT1BP07438 61 aa6.5□□□□□ -1.37
C2CD2-202ENST00000380486 KRTAP19-4Q3LI73 84 aa6.49□□□□□ -1.37
C2CD2-202ENST00000380486 LCE3DQ9BYE3 92 aa6.47□□□□□ -1.37
C2CD2-202ENST00000380486 KRTAP4-7Q9BYR0 210 aa6.47□□□□□ -1.37
C2CD2-202ENST00000380486 LCE2DQ5TA82 110 aaPredicted RBP6.46□□□□□ -1.38
C2CD2-202ENST00000380486 MYCBP2O75592 4640 aa6.42□□□□□ -1.38
C2CD2-202ENST00000380486 LPAP08519 4548 aa6.42□□□□□ -1.38
C2CD2-202ENST00000380486 KRTAP9-8Q9BYQ0 159 aa6.38□□□□□ -1.39
C2CD2-202ENST00000380486 MT4P47944 62 aa6.36□□□□□ -1.39
C2CD2-202ENST00000380486 RYR3Q15413 4870 aa6.34□□□□□ -1.4
C2CD2-202ENST00000380486 LRP1Q07954 4544 aaKnown RBP6.33□□□□□ -1.4
C2CD2-202ENST00000380486 PKD1P98161 4303 aa6.32□□□□□ -1.4
C2CD2-202ENST00000380486 LCE3EQ5T5B0 92 aa6.32□□□□□ -1.4
C2CD2-202ENST00000380486 SPRR5A0A1B0GTR4 108 aa6.26□□□□□ -1.41
C2CD2-202ENST00000380486 KRTAP9-3Q9BYQ3 159 aa6.23□□□□□ -1.41
C2CD2-202ENST00000380486 HSPG2P98160 4391 aa6.21□□□□□ -1.41
C2CD2-202ENST00000380486 LOC100996750A0A140TA64 210 aa6.18□□□□□ -1.42
C2CD2-202ENST00000380486 KRTAP19-3Q7Z4W3 81 aa6.14□□□□□ -1.43
C2CD2-202ENST00000380486 PRM1P04553 51 aa6.13□□□□□ -1.43
C2CD2-202ENST00000380486 LCE1BQ5T7P3 118 aa6.09□□□□□ -1.43
C2CD2-202ENST00000380486 PKHD1L1Q86WI1 4243 aa6.09□□□□□ -1.43
C2CD2-202ENST00000380486 MT1LQ93083 61 aa6.09□□□□□ -1.43
C2CD2-202ENST00000380486 KRTAP4-3Q9BYR4 195 aa6.04□□□□□ -1.44
C2CD2-202ENST00000380486 KRTAP9-2Q9BYQ4 174 aa6.03□□□□□ -1.44
C2CD2-202ENST00000380486 TNXBP22105 4242 aa6.02□□□□□ -1.45
C2CD2-202ENST00000380486 LCE1DQ5T752 114 aa6.01□□□□□ -1.45
C2CD2-202ENST00000380486 MT1EP04732 61 aa6□□□□□ -1.45
C2CD2-202ENST00000380486 PKHD1P08F94 4074 aa5.99□□□□□ -1.45
C2CD2-202ENST00000380486 HYDINQ4G0P3 5121 aa5.93□□□□□ -1.46
C2CD2-202ENST00000380486 HERC1Q15751 4861 aa5.93□□□□□ -1.46
C2CD2-202ENST00000380486 LRP2P98164 4655 aa5.91□□□□□ -1.46
C2CD2-202ENST00000380486 MT3P25713 68 aa5.9□□□□□ -1.46
C2CD2-202ENST00000380486 MT1MQ8N339 61 aa5.86□□□□□ -1.47
C2CD2-202ENST00000380486 KRTAP4-9Q9BYQ8 210 aa5.83□□□□□ -1.48
C2CD2-202ENST00000380486 FLGP20930 4061 aaPredicted RBP5.83□□□□□ -1.48
C2CD2-202ENST00000380486 RYR2Q92736 4967 aa5.81□□□□□ -1.48
C2CD2-202ENST00000380486 KRTAP9-6A0A140TA67 174 aa5.78□□□□□ -1.48
C2CD2-202ENST00000380486 LCE5AQ5TCM9 118 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms