RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 C20orf166-AS1Q96NR2 134 aa6.58□□□□□ -1.36
PRPF40B-202ENST00000380281 APOBP04114 4563 aaKnown RBP6.56□□□□□ -1.36
PRPF40B-202ENST00000380281 KMT2CQ8NEZ4 4911 aaKnown RBP6.55□□□□□ -1.36
PRPF40B-202ENST00000380281 KRTAP15-1Q3LI76 137 aa6.51□□□□□ -1.37
PRPF40B-202ENST00000380281 FAT3Q8TDW7 4589 aa6.5□□□□□ -1.37
PRPF40B-202ENST00000380281 RPL37P61927 97 aaKnown RBP6.48□□□□□ -1.37
PRPF40B-202ENST00000380281 HSPG2P98160 4391 aa6.47□□□□□ -1.37
PRPF40B-202ENST00000380281 KRTAP10-4P60372 401 aaPredicted RBP6.46□□□□□ -1.38
PRPF40B-202ENST00000380281 KRTAP13-4Q3LI77 160 aa6.46□□□□□ -1.38
PRPF40B-202ENST00000380281 RPS29P62273 56 aaKnown RBP6.45□□□□□ -1.38
PRPF40B-202ENST00000380281 KRTAP10-8P60410 259 aa6.44□□□□□ -1.38
PRPF40B-202ENST00000380281 A0A1B0GVY2 172 aa6.43□□□□□ -1.38
PRPF40B-202ENST00000380281 PKHD1L1Q86WI1 4243 aa6.41□□□□□ -1.38
PRPF40B-202ENST00000380281 Q5VSD8 79 aa6.4□□□□□ -1.39
PRPF40B-202ENST00000380281 KIAA1109Q2LD37 5005 aa6.38□□□□□ -1.39
PRPF40B-202ENST00000380281 KRTAP10-6P60371 365 aaPredicted RBP6.36□□□□□ -1.39
PRPF40B-202ENST00000380281 RYR2Q92736 4967 aa6.35□□□□□ -1.39
PRPF40B-202ENST00000380281 LPAP08519 4548 aa6.33□□□□□ -1.4
PRPF40B-202ENST00000380281 XP32Q5T750 250 aa6.32□□□□□ -1.4
PRPF40B-202ENST00000380281 S4R3F8 94 aa6.32□□□□□ -1.4
PRPF40B-202ENST00000380281 KRTAP3-3Q9BYR6 98 aa6.32□□□□□ -1.4
PRPF40B-202ENST00000380281 LRP2P98164 4655 aa6.31□□□□□ -1.4
PRPF40B-202ENST00000380281 KRTAP17-1Q9BYP8 105 aa6.29□□□□□ -1.4
PRPF40B-202ENST00000380281 KRTAP12-2P59991 146 aa6.29□□□□□ -1.4
PRPF40B-202ENST00000380281 RYR3Q15413 4870 aa6.28□□□□□ -1.4
PRPF40B-202ENST00000380281 RYR1P21817 5038 aa6.27□□□□□ -1.41
PRPF40B-202ENST00000380281 KRTAP3-2Q9BYR7 98 aa6.26□□□□□ -1.41
PRPF40B-202ENST00000380281 TNXBP22105 4242 aa6.22□□□□□ -1.41
PRPF40B-202ENST00000380281 LUZP6Q538Z0 58 aa6.2□□□□□ -1.42
PRPF40B-202ENST00000380281 KRTAP12-1P59990 96 aa6.14□□□□□ -1.43
PRPF40B-202ENST00000380281 ABCA13Q86UQ4 5058 aa6.13□□□□□ -1.43
PRPF40B-202ENST00000380281 J3QL48 77 aa6.1□□□□□ -1.43
PRPF40B-202ENST00000380281 MT1HL1P0DM35 61 aa6.09□□□□□ -1.43
PRPF40B-202ENST00000380281 EPPK1P58107 5090 aaKnown RBP6.07□□□□□ -1.44
PRPF40B-202ENST00000380281 M0QZ58 72 aa6.05□□□□□ -1.44
PRPF40B-202ENST00000380281 KRTAP4-5Q9BYR2 181 aa6.04□□□□□ -1.44
PRPF40B-202ENST00000380281 KRTAP21-3Q3LHN1 58 aa6.03□□□□□ -1.44
PRPF40B-202ENST00000380281 PLAC4Q8WY50 150 aa6.02□□□□□ -1.45
PRPF40B-202ENST00000380281 MUC2Q02817 5179 aa6□□□□□ -1.45
PRPF40B-202ENST00000380281 SEC61BP60468 96 aaKnown RBP6□□□□□ -1.45
PRPF40B-202ENST00000380281 R4GN34 69 aa6□□□□□ -1.45
PRPF40B-202ENST00000380281 LORP23490 312 aaPredicted RBP5.94□□□□□ -1.46
PRPF40B-202ENST00000380281 KRTAP4-1Q9BYQ7 146 aa5.83□□□□□ -1.48
PRPF40B-202ENST00000380281 CAMK2N1Q7Z7J9 78 aa5.78□□□□□ -1.48
PRPF40B-202ENST00000380281 HERC2O95714 4834 aa5.78□□□□□ -1.48
PRPF40B-202ENST00000380281 FAT4Q6V0I7 4981 aa5.69□□□□□ -1.5
PRPF40B-202ENST00000380281 HERC1Q15751 4861 aa5.65□□□□□ -1.5
PRPF40B-202ENST00000380281 MUC17Q685J3 4493 aa5.65□□□□□ -1.5
PRPF40B-202ENST00000380281 RNF213Q63HN8 5207 aa5.6□□□□□ -1.51
PRPF40B-202ENST00000380281 PP632Q6XCG6 107 aa5.55□□□□□ -1.52
PRPF40B-202ENST00000380281 PCLOQ9Y6V0 5065 aa5.54□□□□□ -1.52
PRPF40B-202ENST00000380281 M0R2T5 61 aa5.49□□□□□ -1.53
PRPF40B-202ENST00000380281 KRTAP19-2Q3LHN2 52 aa5.47□□□□□ -1.53
PRPF40B-202ENST00000380281 FLGP20930 4061 aaPredicted RBP5.4□□□□□ -1.54
PRPF40B-202ENST00000380281 TNP1P09430 55 aa5.39□□□□□ -1.55
PRPF40B-202ENST00000380281 UBR4Q5T4S7 5183 aa5.38□□□□□ -1.55
PRPF40B-202ENST00000380281 SPRR5A0A1B0GTR4 108 aa5.37□□□□□ -1.55
PRPF40B-202ENST00000380281 HMCN2Q8NDA2 5059 aa5.36□□□□□ -1.55
PRPF40B-202ENST00000380281 PRO2289Q9P1D8 64 aa5.34□□□□□ -1.56
PRPF40B-202ENST00000380281 BIRC6Q9NR09 4857 aa5.33□□□□□ -1.56
PRPF40B-202ENST00000380281 KRTAP10-10P60014 251 aa5.26□□□□□ -1.57
PRPF40B-202ENST00000380281 LCE2CQ5TA81 110 aa5.2□□□□□ -1.58
PRPF40B-202ENST00000380281 KRTAP19-1Q8IUB9 90 aa5.18□□□□□ -1.58
PRPF40B-202ENST00000380281 LCE3AQ5TA76 89 aa5.16□□□□□ -1.58
PRPF40B-202ENST00000380281 KRTAP23-1A1A580 65 aa5.12□□□□□ -1.59
PRPF40B-202ENST00000380281 MT1FP04733 61 aa5.12□□□□□ -1.59
PRPF40B-202ENST00000380281 MT1HP80294 61 aa5.11□□□□□ -1.59
PRPF40B-202ENST00000380281 INE1O15225 51 aa5.11□□□□□ -1.59
PRPF40B-202ENST00000380281 SPRR2GQ9BYE4 73 aa5.07□□□□□ -1.6
PRPF40B-202ENST00000380281 MT2AP02795 61 aa5.07□□□□□ -1.6
PRPF40B-202ENST00000380281 USH2AO75445 5202 aa5.06□□□□□ -1.6
PRPF40B-202ENST00000380281 KMT2DO14686 5537 aa4.99□□□□□ -1.61
PRPF40B-202ENST00000380281 KRTAP9-8Q9BYQ0 159 aa4.97□□□□□ -1.61
PRPF40B-202ENST00000380281 MT1BP07438 61 aa4.89□□□□□ -1.63
PRPF40B-202ENST00000380281 KRTAP10-7P60409 375 aaPredicted RBP4.88□□□□□ -1.63
PRPF40B-202ENST00000380281 KRTAP10-5P60370 271 aa4.88□□□□□ -1.63
PRPF40B-202ENST00000380281 MT1XP80297 61 aa4.88□□□□□ -1.63
PRPF40B-202ENST00000380281 KRTAP10-12P60413 245 aa4.87□□□□□ -1.63
PRPF40B-202ENST00000380281 KRTAP12-3P60328 96 aa4.86□□□□□ -1.63
PRPF40B-202ENST00000380281 FSIP2Q5CZC0 6907 aa4.85□□□□□ -1.63
PRPF40B-202ENST00000380281 KRTAP8-1Q8IUC2 63 aa4.8□□□□□ -1.64
PRPF40B-202ENST00000380281 KRTAP19-8Q3LI54 63 aa4.78□□□□□ -1.64
PRPF40B-202ENST00000380281 KRTAP9-3Q9BYQ3 159 aa4.73□□□□□ -1.65
PRPF40B-202ENST00000380281 KRTAP4-8A0A0G2JLE6 195 aa4.7□□□□□ -1.66
PRPF40B-202ENST00000380281 KRTAP4-8Q9BYQ9 185 aa4.7□□□□□ -1.66
PRPF40B-202ENST00000380281 KRTAP19-5Q3LI72 72 aa4.67□□□□□ -1.66
PRPF40B-202ENST00000380281 LCE2BO14633 110 aa4.65□□□□□ -1.67
PRPF40B-202ENST00000380281 KRTAP4-7Q9BYR0 210 aa4.59□□□□□ -1.67
PRPF40B-202ENST00000380281 LCE3CQ5T5A8 94 aa4.51□□□□□ -1.69
PRPF40B-202ENST00000380281 DSTQ03001 7570 aaKnown RBP4.47□□□□□ -1.69
PRPF40B-202ENST00000380281 KRTAP9-6A8MVA2 160 aa4.46□□□□□ -1.7
PRPF40B-202ENST00000380281 MUC12Q9UKN1 5478 aa4.39□□□□□ -1.71
PRPF40B-202ENST00000380281 FCGBPQ9Y6R7 5405 aaPredicted RBP4.37□□□□□ -1.71
PRPF40B-202ENST00000380281 SSPOA2VEC9 5147 aa4.37□□□□□ -1.71
PRPF40B-202ENST00000380281 CRCT1Q9UGL9 99 aa4.36□□□□□ -1.71
PRPF40B-202ENST00000380281 KRTAP19-7Q3SYF9 63 aa4.34□□□□□ -1.72
PRPF40B-202ENST00000380281 KRTAP2-3P0C7H8 128 aa4.32□□□□□ -1.72
PRPF40B-202ENST00000380281 KRTAP2-4Q9BYR9 128 aa4.32□□□□□ -1.72
PRPF40B-202ENST00000380281 KRTAP2-1Q9BYU5 128 aa4.32□□□□□ -1.72
PRPF40B-202ENST00000380281 LCE2AQ5TA79 106 aaPredicted RBP4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms