RNA–Protein interactions for RNA: ENST00000377126.3

KLF9-201, Transcript of Kruppel like factor 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KLF9, Length 5,175 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLF9-201ENST00000377126 DNAH5Q8TE73 4624 aa9.77□□□□□ -0.85
KLF9-201ENST00000377126 VPS13DQ5THJ4 4388 aa9.75□□□□□ -0.85
KLF9-201ENST00000377126 DNAH17Q9UFH2 4485 aa9.72□□□□□ -0.85
KLF9-201ENST00000377126 KRTAP4-5Q9BYR2 181 aa9.72□□□□□ -0.85
KLF9-201ENST00000377126 DNAH11Q96DT5 4516 aa9.72□□□□□ -0.85
KLF9-201ENST00000377126 STARD9Q9P2P6 4700 aa9.57□□□□□ -0.88
KLF9-201ENST00000377126 DNAH3Q8TD57 4116 aa9.51□□□□□ -0.89
KLF9-201ENST00000377126 DNHD1Q96M86 4753 aa9.47□□□□□ -0.89
KLF9-201ENST00000377126 DNAH2Q9P225 4427 aa9.46□□□□□ -0.89
KLF9-201ENST00000377126 DNAH8Q96JB1 4490 aa9.41□□□□□ -0.9
KLF9-201ENST00000377126 DYNC1H1Q14204 4646 aaKnown RBP9.4□□□□□ -0.9
KLF9-201ENST00000377126 LORP23490 312 aaPredicted RBP9.37□□□□□ -0.91
KLF9-201ENST00000377126 LRP1BQ9NZR2 4599 aa9.35□□□□□ -0.91
KLF9-201ENST00000377126 INE1O15225 51 aa9.33□□□□□ -0.92
KLF9-201ENST00000377126 ANK2Q01484 3957 aa9.32□□□□□ -0.92
KLF9-201ENST00000377126 DYNC2H1Q8NCM8 4307 aaKnown RBP9.3□□□□□ -0.92
KLF9-201ENST00000377126 PRKDCP78527 4128 aaKnown RBP9.3□□□□□ -0.92
KLF9-201ENST00000377126 FAT1Q14517 4588 aa9.28□□□□□ -0.92
KLF9-201ENST00000377126 SACSQ9NZJ4 4579 aa9.23□□□□□ -0.93
KLF9-201ENST00000377126 KMT2AQ03164 3969 aa9.21□□□□□ -0.94
KLF9-201ENST00000377126 FAT2Q9NYQ8 4349 aa9.16□□□□□ -0.94
KLF9-201ENST00000377126 CMYA5Q8N3K9 4069 aa9.15□□□□□ -0.94
KLF9-201ENST00000377126 KRTAP23-1A1A580 65 aa9.14□□□□□ -0.95
KLF9-201ENST00000377126 KRTAP10-12P60413 245 aa9.13□□□□□ -0.95
KLF9-201ENST00000377126 KRTAP4-1Q9BYQ7 146 aa9.12□□□□□ -0.95
KLF9-201ENST00000377126 VPS13BQ7Z7G8 4022 aa9.04□□□□□ -0.96
KLF9-201ENST00000377126 LCE3AQ5TA76 89 aa8.98□□□□□ -0.97
KLF9-201ENST00000377126 RYR1P21817 5038 aa8.95□□□□□ -0.98
KLF9-201ENST00000377126 KRTAP12-3P60328 96 aa8.94□□□□□ -0.98
KLF9-201ENST00000377126 FRAS1Q86XX4 4008 aa8.92□□□□□ -0.98
KLF9-201ENST00000377126 DNAH6Q9C0G6 4158 aa8.91□□□□□ -0.98
KLF9-201ENST00000377126 HECTD4Q9Y4D8 3996 aa8.91□□□□□ -0.98
KLF9-201ENST00000377126 LYSTQ99698 3801 aa8.89□□□□□ -0.99
KLF9-201ENST00000377126 APOBP04114 4563 aaKnown RBP8.89□□□□□ -0.99
KLF9-201ENST00000377126 DNAH7Q8WXX0 4024 aa8.85□□□□□ -0.99
KLF9-201ENST00000377126 MT1HP80294 61 aa8.71□□□□□ -1.01
KLF9-201ENST00000377126 KRTAP17-1Q9BYP8 105 aa8.71□□□□□ -1.02
KLF9-201ENST00000377126 MYCBP2O75592 4640 aa8.7□□□□□ -1.02
KLF9-201ENST00000377126 SPRR2GQ9BYE4 73 aa8.67□□□□□ -1.02
KLF9-201ENST00000377126 KIAA1109Q2LD37 5005 aa8.67□□□□□ -1.02
KLF9-201ENST00000377126 MT2AP02795 61 aa8.63□□□□□ -1.03
KLF9-201ENST00000377126 LRP1Q07954 4544 aaKnown RBP8.61□□□□□ -1.03
KLF9-201ENST00000377126 RYR3Q15413 4870 aa8.59□□□□□ -1.03
KLF9-201ENST00000377126 FAT3Q8TDW7 4589 aa8.57□□□□□ -1.04
KLF9-201ENST00000377126 HYDINQ4G0P3 5121 aa8.53□□□□□ -1.04
KLF9-201ENST00000377126 RYR2Q92736 4967 aa8.53□□□□□ -1.04
KLF9-201ENST00000377126 MT1FP04733 61 aa8.49□□□□□ -1.05
KLF9-201ENST00000377126 CRCT1Q9UGL9 99 aa8.43□□□□□ -1.06
KLF9-201ENST00000377126 PKHD1P08F94 4074 aa8.34□□□□□ -1.07
KLF9-201ENST00000377126 PKD1P98161 4303 aa8.28□□□□□ -1.08
KLF9-201ENST00000377126 HSPG2P98160 4391 aa8.27□□□□□ -1.09
KLF9-201ENST00000377126 KRTAP19-1Q8IUB9 90 aa8.24□□□□□ -1.09
KLF9-201ENST00000377126 KRTAP8-1Q8IUC2 63 aa8.23□□□□□ -1.09
KLF9-201ENST00000377126 LRP2P98164 4655 aa8.19□□□□□ -1.1
KLF9-201ENST00000377126 KRTAP19-8Q3LI54 63 aa8.13□□□□□ -1.11
KLF9-201ENST00000377126 HERC2O95714 4834 aa8.1□□□□□ -1.11
KLF9-201ENST00000377126 KRTAP19-5Q3LI72 72 aa8.1□□□□□ -1.11
KLF9-201ENST00000377126 PKHD1L1Q86WI1 4243 aa8.05□□□□□ -1.12
KLF9-201ENST00000377126 LCE3CQ5T5A8 94 aa7.98□□□□□ -1.13
KLF9-201ENST00000377126 KMT2CQ8NEZ4 4911 aaKnown RBP7.97□□□□□ -1.13
KLF9-201ENST00000377126 LCE2CQ5TA81 110 aa7.96□□□□□ -1.13
KLF9-201ENST00000377126 KRTAP10-7P60409 375 aaPredicted RBP7.96□□□□□ -1.14
KLF9-201ENST00000377126 TNXBP22105 4242 aa7.96□□□□□ -1.14
KLF9-201ENST00000377126 MT1XP80297 61 aa7.93□□□□□ -1.14
KLF9-201ENST00000377126 KRTAP10-5P60370 271 aa7.93□□□□□ -1.14
KLF9-201ENST00000377126 KRTAP9-8Q9BYQ0 159 aa7.93□□□□□ -1.14
KLF9-201ENST00000377126 LPAP08519 4548 aa7.92□□□□□ -1.14
KLF9-201ENST00000377126 MT1BP07438 61 aa7.9□□□□□ -1.14
KLF9-201ENST00000377126 BIRC6Q9NR09 4857 aa7.88□□□□□ -1.15
KLF9-201ENST00000377126 KRTAP19-2Q3LHN2 52 aa7.83□□□□□ -1.16
KLF9-201ENST00000377126 SPRR5A0A1B0GTR4 108 aa7.82□□□□□ -1.16
KLF9-201ENST00000377126 HERC1Q15751 4861 aa7.79□□□□□ -1.16
KLF9-201ENST00000377126 KRTAP19-4Q3LI73 84 aa7.77□□□□□ -1.17
KLF9-201ENST00000377126 KRTAP9-3Q9BYQ3 159 aa7.7□□□□□ -1.18
KLF9-201ENST00000377126 PCLOQ9Y6V0 5065 aa7.64□□□□□ -1.19
KLF9-201ENST00000377126 SPRR2FQ96RM1 72 aa7.64□□□□□ -1.19
KLF9-201ENST00000377126 MUC17Q685J3 4493 aa7.62□□□□□ -1.19
KLF9-201ENST00000377126 FLGP20930 4061 aaPredicted RBP7.56□□□□□ -1.2
KLF9-201ENST00000377126 EPPK1P58107 5090 aaKnown RBP7.54□□□□□ -1.2
KLF9-201ENST00000377126 ABCA13Q86UQ4 5058 aa7.51□□□□□ -1.21
KLF9-201ENST00000377126 KRTAP4-8A0A0G2JLE6 195 aa7.49□□□□□ -1.21
KLF9-201ENST00000377126 KRTAP4-8Q9BYQ9 185 aa7.49□□□□□ -1.21
KLF9-201ENST00000377126 LCE2BO14633 110 aa7.33□□□□□ -1.24
KLF9-201ENST00000377126 MT1GP13640 62 aa7.25□□□□□ -1.25
KLF9-201ENST00000377126 LCE3BQ5TA77 95 aa7.11□□□□□ -1.27
KLF9-201ENST00000377126 MT1LQ93083 61 aa7.1□□□□□ -1.27
KLF9-201ENST00000377126 KRTAP12-4P60329 112 aa7.1□□□□□ -1.27
KLF9-201ENST00000377126 FAT4Q6V0I7 4981 aa7.1□□□□□ -1.27
KLF9-201ENST00000377126 KRTAP4-7Q9BYR0 210 aa7.09□□□□□ -1.27
KLF9-201ENST00000377126 RNF213Q63HN8 5207 aa7.08□□□□□ -1.28
KLF9-201ENST00000377126 SPRR2EP22531 72 aa7.07□□□□□ -1.28
KLF9-201ENST00000377126 SPRR2BP35325 72 aa7.07□□□□□ -1.28
KLF9-201ENST00000377126 SPRR2AP35326 72 aa7.07□□□□□ -1.28
KLF9-201ENST00000377126 MT1EP04732 61 aa7.06□□□□□ -1.28
KLF9-201ENST00000377126 HMCN2Q8NDA2 5059 aa7.03□□□□□ -1.28
KLF9-201ENST00000377126 KRTAP19-3Q7Z4W3 81 aa6.99□□□□□ -1.29
KLF9-201ENST00000377126 UBR4Q5T4S7 5183 aa6.89□□□□□ -1.31
KLF9-201ENST00000377126 KRTAP19-6Q3LI70 58 aa6.85□□□□□ -1.31
KLF9-201ENST00000377126 LCE2AQ5TA79 106 aaPredicted RBP6.85□□□□□ -1.31
KLF9-201ENST00000377126 SPRR2DP22532 72 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms