RNA–Protein interactions for RNA: ENST00000376887.8

ABCC4-201, Transcript of ATP binding cassette subfamily C member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCC4, Length 5,839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC4-201ENST00000376887 H0YAA0 97 aa4.05□□□□□ -1.76
ABCC4-201ENST00000376887 TPRXLQ17RH7 258 aa4.05□□□□□ -1.76
ABCC4-201ENST00000376887 LRP1BQ9NZR2 4599 aa4.05□□□□□ -1.76
ABCC4-201ENST00000376887 FAT1Q14517 4588 aa4.05□□□□□ -1.76
ABCC4-201ENST00000376887 DNAH5Q8TE73 4624 aa4.04□□□□□ -1.76
ABCC4-201ENST00000376887 DNAH2Q9P225 4427 aa4.04□□□□□ -1.76
ABCC4-201ENST00000376887 DNAH17Q9UFH2 4485 aa4.04□□□□□ -1.76
ABCC4-201ENST00000376887 DNAH6Q9C0G6 4158 aa4.03□□□□□ -1.76
ABCC4-201ENST00000376887 HECTD4Q9Y4D8 3996 aa4.02□□□□□ -1.77
ABCC4-201ENST00000376887 KRTAP3-1Q9BYR8 98 aa4.01□□□□□ -1.77
ABCC4-201ENST00000376887 DYNC2H1Q8NCM8 4307 aaKnown RBP3.97□□□□□ -1.77
ABCC4-201ENST00000376887 ALMS1Q8TCU4 4167 aa3.96□□□□□ -1.77
ABCC4-201ENST00000376887 MYCBP2O75592 4640 aa3.95□□□□□ -1.78
ABCC4-201ENST00000376887 VPS13BQ7Z7G8 4022 aa3.94□□□□□ -1.78
ABCC4-201ENST00000376887 KRTAP12-2P59991 146 aa3.93□□□□□ -1.78
ABCC4-201ENST00000376887 DYNC1H1Q14204 4646 aaKnown RBP3.92□□□□□ -1.78
ABCC4-201ENST00000376887 KRTAP10-4P60372 401 aaPredicted RBP3.9□□□□□ -1.78
ABCC4-201ENST00000376887 HYDINQ4G0P3 5121 aa3.88□□□□□ -1.79
ABCC4-201ENST00000376887 KRTAP15-1Q3LI76 137 aa3.88□□□□□ -1.79
ABCC4-201ENST00000376887 KRTAP13-4Q3LI77 160 aa3.87□□□□□ -1.79
ABCC4-201ENST00000376887 PKHD1P08F94 4074 aa3.86□□□□□ -1.79
ABCC4-201ENST00000376887 LRP1Q07954 4544 aaKnown RBP3.84□□□□□ -1.79
ABCC4-201ENST00000376887 KIAA1109Q2LD37 5005 aa3.84□□□□□ -1.79
ABCC4-201ENST00000376887 FAT3Q8TDW7 4589 aa3.82□□□□□ -1.8
ABCC4-201ENST00000376887 KRTAP10-6P60371 365 aaPredicted RBP3.82□□□□□ -1.8
ABCC4-201ENST00000376887 INE1O15225 51 aa3.82□□□□□ -1.8
ABCC4-201ENST00000376887 SACSQ9NZJ4 4579 aa3.8□□□□□ -1.8
ABCC4-201ENST00000376887 RYR1P21817 5038 aa3.8□□□□□ -1.8
ABCC4-201ENST00000376887 MT1HL1P0DM35 61 aa3.8□□□□□ -1.8
ABCC4-201ENST00000376887 APOBP04114 4563 aaKnown RBP3.79□□□□□ -1.8
ABCC4-201ENST00000376887 FAT2Q9NYQ8 4349 aa3.79□□□□□ -1.8
ABCC4-201ENST00000376887 KRTAP3-3Q9BYR6 98 aa3.79□□□□□ -1.8
ABCC4-201ENST00000376887 KRTAP4-5Q9BYR2 181 aa3.77□□□□□ -1.81
ABCC4-201ENST00000376887 PKD1P98161 4303 aa3.75□□□□□ -1.81
ABCC4-201ENST00000376887 KRTAP3-2Q9BYR7 98 aa3.75□□□□□ -1.81
ABCC4-201ENST00000376887 RYR3Q15413 4870 aa3.73□□□□□ -1.81
ABCC4-201ENST00000376887 KMT2CQ8NEZ4 4911 aaKnown RBP3.73□□□□□ -1.81
ABCC4-201ENST00000376887 KRTAP12-1P59990 96 aa3.72□□□□□ -1.81
ABCC4-201ENST00000376887 KRTAP17-1Q9BYP8 105 aa3.68□□□□□ -1.82
ABCC4-201ENST00000376887 CRCT1Q9UGL9 99 aa3.66□□□□□ -1.82
ABCC4-201ENST00000376887 LRP2P98164 4655 aa3.66□□□□□ -1.82
ABCC4-201ENST00000376887 RYR2Q92736 4967 aa3.64□□□□□ -1.83
ABCC4-201ENST00000376887 LORP23490 312 aaPredicted RBP3.59□□□□□ -1.83
ABCC4-201ENST00000376887 PKHD1L1Q86WI1 4243 aa3.57□□□□□ -1.84
ABCC4-201ENST00000376887 HSPG2P98160 4391 aa3.57□□□□□ -1.84
ABCC4-201ENST00000376887 KRTAP10-12P60413 245 aa3.57□□□□□ -1.84
ABCC4-201ENST00000376887 LPAP08519 4548 aa3.55□□□□□ -1.84
ABCC4-201ENST00000376887 KRTAP4-1Q9BYQ7 146 aa3.54□□□□□ -1.84
ABCC4-201ENST00000376887 TNXBP22105 4242 aa3.52□□□□□ -1.85
ABCC4-201ENST00000376887 HERC2O95714 4834 aa3.5□□□□□ -1.85
ABCC4-201ENST00000376887 EPPK1P58107 5090 aaKnown RBP3.47□□□□□ -1.85
ABCC4-201ENST00000376887 KRTAP12-3P60328 96 aa3.44□□□□□ -1.86
ABCC4-201ENST00000376887 KRTAP10-5P60370 271 aa3.43□□□□□ -1.86
ABCC4-201ENST00000376887 KRTAP23-1A1A580 65 aa3.42□□□□□ -1.86
ABCC4-201ENST00000376887 ABCA13Q86UQ4 5058 aa3.4□□□□□ -1.86
ABCC4-201ENST00000376887 MUC2Q02817 5179 aa3.39□□□□□ -1.87
ABCC4-201ENST00000376887 KRTAP8-1Q8IUC2 63 aa3.35□□□□□ -1.87
ABCC4-201ENST00000376887 LCE3AQ5TA76 89 aa3.29□□□□□ -1.88
ABCC4-201ENST00000376887 HERC1Q15751 4861 aa3.28□□□□□ -1.88
ABCC4-201ENST00000376887 RNF213Q63HN8 5207 aa3.28□□□□□ -1.88
ABCC4-201ENST00000376887 FAT4Q6V0I7 4981 aa3.27□□□□□ -1.89
ABCC4-201ENST00000376887 PCLOQ9Y6V0 5065 aa3.25□□□□□ -1.89
ABCC4-201ENST00000376887 KRTAP10-7P60409 375 aaPredicted RBP3.22□□□□□ -1.89
ABCC4-201ENST00000376887 BIRC6Q9NR09 4857 aa3.21□□□□□ -1.9
ABCC4-201ENST00000376887 MT1HP80294 61 aa3.2□□□□□ -1.9
ABCC4-201ENST00000376887 MT1FP04733 61 aa3.18□□□□□ -1.9
ABCC4-201ENST00000376887 MT2AP02795 61 aa3.18□□□□□ -1.9
ABCC4-201ENST00000376887 KRTAP19-2Q3LHN2 52 aa3.17□□□□□ -1.9
ABCC4-201ENST00000376887 MUC17Q685J3 4493 aa3.16□□□□□ -1.9
ABCC4-201ENST00000376887 KRTAP19-1Q8IUB9 90 aa3.15□□□□□ -1.91
ABCC4-201ENST00000376887 UBR4Q5T4S7 5183 aa3.15□□□□□ -1.91
ABCC4-201ENST00000376887 KRTAP19-4Q3LI73 84 aa3.15□□□□□ -1.91
ABCC4-201ENST00000376887 SPRR2GQ9BYE4 73 aa3.14□□□□□ -1.91
ABCC4-201ENST00000376887 LCE2CQ5TA81 110 aa3.12□□□□□ -1.91
ABCC4-201ENST00000376887 FLGP20930 4061 aaPredicted RBP3.12□□□□□ -1.91
ABCC4-201ENST00000376887 FSIP2Q5CZC0 6907 aa3.07□□□□□ -1.92
ABCC4-201ENST00000376887 HMCN2Q8NDA2 5059 aa3.05□□□□□ -1.92
ABCC4-201ENST00000376887 SPRR2FQ96RM1 72 aa3.04□□□□□ -1.92
ABCC4-201ENST00000376887 KRTAP9-8Q9BYQ0 159 aa3.03□□□□□ -1.92
ABCC4-201ENST00000376887 MT1BP07438 61 aa2.99□□□□□ -1.93
ABCC4-201ENST00000376887 MT1XP80297 61 aa2.97□□□□□ -1.93
ABCC4-201ENST00000376887 KRTAP19-8Q3LI54 63 aa2.96□□□□□ -1.94
ABCC4-201ENST00000376887 LCE3CQ5T5A8 94 aa2.93□□□□□ -1.94
ABCC4-201ENST00000376887 KRTAP19-5Q3LI72 72 aa2.92□□□□□ -1.94
ABCC4-201ENST00000376887 USH2AO75445 5202 aa2.92□□□□□ -1.94
ABCC4-201ENST00000376887 SPRR2EP22531 72 aa2.92□□□□□ -1.94
ABCC4-201ENST00000376887 SPRR2BP35325 72 aa2.92□□□□□ -1.94
ABCC4-201ENST00000376887 SPRR2AP35326 72 aa2.92□□□□□ -1.94
ABCC4-201ENST00000376887 KRTAP9-3Q9BYQ3 159 aa2.9□□□□□ -1.95
ABCC4-201ENST00000376887 KRTAP4-8A0A0G2JLE6 195 aa2.9□□□□□ -1.95
ABCC4-201ENST00000376887 KRTAP4-8Q9BYQ9 185 aa2.9□□□□□ -1.95
ABCC4-201ENST00000376887 KRTAP12-4P60329 112 aa2.88□□□□□ -1.95
ABCC4-201ENST00000376887 SPRR5A0A1B0GTR4 108 aa2.86□□□□□ -1.95
ABCC4-201ENST00000376887 MT3P25713 68 aa2.86□□□□□ -1.95
ABCC4-201ENST00000376887 SPRR2DP22532 72 aa2.85□□□□□ -1.95
ABCC4-201ENST00000376887 LCE2BO14633 110 aa2.85□□□□□ -1.95
ABCC4-201ENST00000376887 OBSCNQ5VST9 7968 aa2.84□□□□□ -1.96
ABCC4-201ENST00000376887 KMT2DO14686 5537 aa2.84□□□□□ -1.96
ABCC4-201ENST00000376887 LCE3BQ5TA77 95 aa2.81□□□□□ -1.96
ABCC4-201ENST00000376887 SYNE1Q8NF91 8797 aaKnown RBP2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms