RNA–Protein interactions for RNA: ENST00000376751.7

RNF39-202, Transcript of ring finger protein 39, humanhuman

TSL 1 (best) BASIC

Gene RNF39, Length 1,970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-202ENST00000376751 ABCA13Q86UQ4 5058 aa11.12□□□□□ -0.63
RNF39-202ENST00000376751 SEC61GP60059 68 aa11.12□□□□□ -0.63
RNF39-202ENST00000376751 MIR22HGQ0VDD5 57 aa11.12□□□□□ -0.63
RNF39-202ENST00000376751 TPRXLQ17RH7 258 aa11.11□□□□□ -0.63
RNF39-202ENST00000376751 LRP2P98164 4655 aa11.09□□□□□ -0.63
RNF39-202ENST00000376751 KRTAP3-3Q9BYR6 98 aa11.03□□□□□ -0.64
RNF39-202ENST00000376751 LPAP08519 4548 aa11.03□□□□□ -0.64
RNF39-202ENST00000376751 H0YAA0 97 aa10.94□□□□□ -0.66
RNF39-202ENST00000376751 S4R3F8 94 aa10.94□□□□□ -0.66
RNF39-202ENST00000376751 A0A1B0GU33 70 aa10.92□□□□□ -0.66
RNF39-202ENST00000376751 H1FX-AS1Q4G0G2 97 aa10.92□□□□□ -0.66
RNF39-202ENST00000376751 KTN1-AS1Q86SY8 53 aa10.92□□□□□ -0.66
RNF39-202ENST00000376751 HERC2O95714 4834 aa10.92□□□□□ -0.66
RNF39-202ENST00000376751 BIRC6Q9NR09 4857 aa10.91□□□□□ -0.66
RNF39-202ENST00000376751 J3QL48 77 aa10.81□□□□□ -0.68
RNF39-202ENST00000376751 KRTAP10-6P60371 365 aaPredicted RBP10.81□□□□□ -0.68
RNF39-202ENST00000376751 KRTAP3-2Q9BYR7 98 aa10.79□□□□□ -0.68
RNF39-202ENST00000376751 RBM12B-AS1Q9P1G2 102 aa10.74□□□□□ -0.69
RNF39-202ENST00000376751 SEC61BP60468 96 aaKnown RBP10.67□□□□□ -0.7
RNF39-202ENST00000376751 MUC17Q685J3 4493 aa10.66□□□□□ -0.7
RNF39-202ENST00000376751 P0C880 135 aa10.65□□□□□ -0.7
RNF39-202ENST00000376751 KRTAP13-4Q3LI77 160 aa10.65□□□□□ -0.7
RNF39-202ENST00000376751 ADM2Q7Z4H4 148 aa10.64□□□□□ -0.71
RNF39-202ENST00000376751 KRTAP4-1Q9BYQ7 146 aa10.64□□□□□ -0.71
RNF39-202ENST00000376751 PRAC1Q96KF2 57 aa10.6□□□□□ -0.71
RNF39-202ENST00000376751 CSAG1Q6PB30 78 aa10.57□□□□□ -0.72
RNF39-202ENST00000376751 A0A0D9SG42 100 aa10.47□□□□□ -0.73
RNF39-202ENST00000376751 PCLOQ9Y6V0 5065 aa10.45□□□□□ -0.74
RNF39-202ENST00000376751 KRTAP19-2Q3LHN2 52 aa10.41□□□□□ -0.74
RNF39-202ENST00000376751 K7ERS5 55 aa10.39□□□□□ -0.75
RNF39-202ENST00000376751 HERC1Q15751 4861 aa10.38□□□□□ -0.75
RNF39-202ENST00000376751 HMCN2Q8NDA2 5059 aa10.32□□□□□ -0.76
RNF39-202ENST00000376751 M0QZ58 72 aa10.25□□□□□ -0.77
RNF39-202ENST00000376751 KRTAP12-2P59991 146 aa10.25□□□□□ -0.77
RNF39-202ENST00000376751 MUC2Q02817 5179 aa10.24□□□□□ -0.77
RNF39-202ENST00000376751 FLGP20930 4061 aaPredicted RBP10.21□□□□□ -0.77
RNF39-202ENST00000376751 KRTAP12-1P59990 96 aa10.21□□□□□ -0.78
RNF39-202ENST00000376751 ROMO1P60602 79 aa10.16□□□□□ -0.78
RNF39-202ENST00000376751 LORP23490 312 aaPredicted RBP10.14□□□□□ -0.79
RNF39-202ENST00000376751 SPINT4Q6UDR6 99 aa10.13□□□□□ -0.79
RNF39-202ENST00000376751 KRTAP25-1Q3LHN0 102 aa10.09□□□□□ -0.79
RNF39-202ENST00000376751 CRIPTQ9P021 101 aa10.08□□□□□ -0.8
RNF39-202ENST00000376751 R4GN34 69 aa10.08□□□□□ -0.8
RNF39-202ENST00000376751 LINC01554Q52M75 96 aa10.04□□□□□ -0.8
RNF39-202ENST00000376751 LCE2CQ5TA81 110 aa9.94□□□□□ -0.82
RNF39-202ENST00000376751 RNF213Q63HN8 5207 aa9.89□□□□□ -0.83
RNF39-202ENST00000376751 UBR4Q5T4S7 5183 aa9.84□□□□□ -0.83
RNF39-202ENST00000376751 C10orf95Q9H7T3 257 aa9.82□□□□□ -0.84
RNF39-202ENST00000376751 FAT4Q6V0I7 4981 aa9.79□□□□□ -0.84
RNF39-202ENST00000376751 MT1HP80294 61 aa9.66□□□□□ -0.86
RNF39-202ENST00000376751 M0R2T5 61 aa9.57□□□□□ -0.88
RNF39-202ENST00000376751 CAMK2N1Q7Z7J9 78 aa9.52□□□□□ -0.89
RNF39-202ENST00000376751 KRTAP19-1Q8IUB9 90 aa9.45□□□□□ -0.9
RNF39-202ENST00000376751 SPRR2GQ9BYE4 73 aa9.45□□□□□ -0.9
RNF39-202ENST00000376751 MT2AP02795 61 aa9.43□□□□□ -0.9
RNF39-202ENST00000376751 MT1FP04733 61 aa9.42□□□□□ -0.9
RNF39-202ENST00000376751 KRTAP9-8Q9BYQ0 159 aa9.39□□□□□ -0.91
RNF39-202ENST00000376751 KRTAP10-10P60014 251 aa9.33□□□□□ -0.92
RNF39-202ENST00000376751 PLAC4Q8WY50 150 aa9.21□□□□□ -0.93
RNF39-202ENST00000376751 KRTAP15-1Q3LI76 137 aa9.12□□□□□ -0.95
RNF39-202ENST00000376751 TNP1P09430 55 aa9.12□□□□□ -0.95
RNF39-202ENST00000376751 KRTAP19-8Q3LI54 63 aa9.12□□□□□ -0.95
RNF39-202ENST00000376751 PP632Q6XCG6 107 aa9.1□□□□□ -0.95
RNF39-202ENST00000376751 MT1BP07438 61 aa9.03□□□□□ -0.96
RNF39-202ENST00000376751 KRTAP9-3Q9BYQ3 159 aa9.02□□□□□ -0.97
RNF39-202ENST00000376751 KRTAP23-1A1A580 65 aa8.93□□□□□ -0.98
RNF39-202ENST00000376751 KRTAP10-5P60370 271 aa8.86□□□□□ -0.99
RNF39-202ENST00000376751 MT1XP80297 61 aa8.86□□□□□ -0.99
RNF39-202ENST00000376751 LCE2AQ5TA79 106 aaPredicted RBP8.84□□□□□ -0.99
RNF39-202ENST00000376751 LCE3AQ5TA76 89 aa8.76□□□□□ -1.01
RNF39-202ENST00000376751 LCE2BO14633 110 aa8.73□□□□□ -1.01
RNF39-202ENST00000376751 NDUFAF8A1L188 74 aa8.69□□□□□ -1.02
RNF39-202ENST00000376751 KRTAP10-7P60409 375 aaPredicted RBP8.58□□□□□ -1.04
RNF39-202ENST00000376751 H3BS24 57 aa8.57□□□□□ -1.04
RNF39-202ENST00000376751 KRTAP10-12P60413 245 aa8.54□□□□□ -1.04
RNF39-202ENST00000376751 KRTAP8-1Q8IUC2 63 aa8.53□□□□□ -1.04
RNF39-202ENST00000376751 PRO2289Q9P1D8 64 aa8.51□□□□□ -1.05
RNF39-202ENST00000376751 USH2AO75445 5202 aa8.47□□□□□ -1.05
RNF39-202ENST00000376751 SPRR5A0A1B0GTR4 108 aa8.42□□□□□ -1.06
RNF39-202ENST00000376751 KRTAP12-3P60328 96 aa8.33□□□□□ -1.08
RNF39-202ENST00000376751 LUZP6Q538Z0 58 aa8.31□□□□□ -1.08
RNF39-202ENST00000376751 SSPOA2VEC9 5147 aa8.16□□□□□ -1.1
RNF39-202ENST00000376751 KMT2DO14686 5537 aa8.16□□□□□ -1.1
RNF39-202ENST00000376751 KRTAP19-5Q3LI72 72 aa8.15□□□□□ -1.1
RNF39-202ENST00000376751 KRTAP4-8A0A0G2JLE6 195 aa8.12□□□□□ -1.11
RNF39-202ENST00000376751 KRTAP4-8Q9BYQ9 185 aa8.12□□□□□ -1.11
RNF39-202ENST00000376751 KRTAP19-6Q3LI70 58 aa7.94□□□□□ -1.14
RNF39-202ENST00000376751 KRTAP19-7Q3SYF9 63 aa7.9□□□□□ -1.14
RNF39-202ENST00000376751 FSIP2Q5CZC0 6907 aa7.83□□□□□ -1.16
RNF39-202ENST00000376751 LCE3CQ5T5A8 94 aa7.83□□□□□ -1.16
RNF39-202ENST00000376751 LCE2DQ5TA82 110 aaPredicted RBP7.82□□□□□ -1.16
RNF39-202ENST00000376751 MT1EP04732 61 aa7.71□□□□□ -1.18
RNF39-202ENST00000376751 KRTAP9-2Q9BYQ4 174 aa7.7□□□□□ -1.18
RNF39-202ENST00000376751 MT1LQ93083 61 aa7.64□□□□□ -1.19
RNF39-202ENST00000376751 FCGBPQ9Y6R7 5405 aaPredicted RBP7.63□□□□□ -1.19
RNF39-202ENST00000376751 KRTAP4-7Q9BYR0 210 aa7.61□□□□□ -1.19
RNF39-202ENST00000376751 A0A0A0MQY5 61 aa7.6□□□□□ -1.19
RNF39-202ENST00000376751 KRTAP9-6A8MVA2 160 aa7.57□□□□□ -1.2
RNF39-202ENST00000376751 KRTAP19-4Q3LI73 84 aa7.47□□□□□ -1.21
RNF39-202ENST00000376751 CRCT1Q9UGL9 99 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms