RNA–Protein interactions for RNA: ENST00000375608.7

MCF2L-204, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5 BASIC

Gene MCF2L, Length 3,648 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-204ENST00000375608 KRTAP10-6P60371 365 aaPredicted RBP7.02□□□□□ -1.29
MCF2L-204ENST00000375608 MYCBP2O75592 4640 aa7.01□□□□□ -1.29
MCF2L-204ENST00000375608 HYDINQ4G0P3 5121 aa7.01□□□□□ -1.29
MCF2L-204ENST00000375608 KRTAP12-2P59991 146 aa6.97□□□□□ -1.29
MCF2L-204ENST00000375608 M0QZ58 72 aa6.97□□□□□ -1.29
MCF2L-204ENST00000375608 XP32Q5T750 250 aa6.97□□□□□ -1.29
MCF2L-204ENST00000375608 R4GN34 69 aa6.95□□□□□ -1.3
MCF2L-204ENST00000375608 LUZP6Q538Z0 58 aa6.93□□□□□ -1.3
MCF2L-204ENST00000375608 KRTAP3-3Q9BYR6 98 aa6.93□□□□□ -1.3
MCF2L-204ENST00000375608 PKHD1P08F94 4074 aa6.92□□□□□ -1.3
MCF2L-204ENST00000375608 DYNC1H1Q14204 4646 aaKnown RBP6.89□□□□□ -1.31
MCF2L-204ENST00000375608 KRTAP3-2Q9BYR7 98 aa6.89□□□□□ -1.31
MCF2L-204ENST00000375608 FAT2Q9NYQ8 4349 aa6.87□□□□□ -1.31
MCF2L-204ENST00000375608 A0A1B0GVY2 172 aa6.84□□□□□ -1.31
MCF2L-204ENST00000375608 KRTAP12-1P59990 96 aa6.82□□□□□ -1.32
MCF2L-204ENST00000375608 LRP1Q07954 4544 aaKnown RBP6.82□□□□□ -1.32
MCF2L-204ENST00000375608 CAMK2N1Q7Z7J9 78 aa6.8□□□□□ -1.32
MCF2L-204ENST00000375608 KRTAP10-4P60372 401 aaPredicted RBP6.8□□□□□ -1.32
MCF2L-204ENST00000375608 KMT2CQ8NEZ4 4911 aaKnown RBP6.79□□□□□ -1.32
MCF2L-204ENST00000375608 SACSQ9NZJ4 4579 aa6.78□□□□□ -1.32
MCF2L-204ENST00000375608 J3QL48 77 aa6.73□□□□□ -1.33
MCF2L-204ENST00000375608 PKD1P98161 4303 aa6.72□□□□□ -1.33
MCF2L-204ENST00000375608 FAT3Q8TDW7 4589 aa6.72□□□□□ -1.33
MCF2L-204ENST00000375608 APOBP04114 4563 aaKnown RBP6.72□□□□□ -1.33
MCF2L-204ENST00000375608 KIAA1109Q2LD37 5005 aa6.7□□□□□ -1.34
MCF2L-204ENST00000375608 KRTAP15-1Q3LI76 137 aa6.68□□□□□ -1.34
MCF2L-204ENST00000375608 PLAC4Q8WY50 150 aa6.63□□□□□ -1.35
MCF2L-204ENST00000375608 RYR3Q15413 4870 aa6.6□□□□□ -1.35
MCF2L-204ENST00000375608 HSPG2P98160 4391 aa6.59□□□□□ -1.35
MCF2L-204ENST00000375608 RYR1P21817 5038 aa6.57□□□□□ -1.36
MCF2L-204ENST00000375608 RYR2Q92736 4967 aa6.57□□□□□ -1.36
MCF2L-204ENST00000375608 SEC61BP60468 96 aaKnown RBP6.53□□□□□ -1.36
MCF2L-204ENST00000375608 LRP2P98164 4655 aa6.52□□□□□ -1.37
MCF2L-204ENST00000375608 KRTAP4-5Q9BYR2 181 aa6.5□□□□□ -1.37
MCF2L-204ENST00000375608 MT1HL1P0DM35 61 aa6.48□□□□□ -1.37
MCF2L-204ENST00000375608 LORP23490 312 aaPredicted RBP6.48□□□□□ -1.37
MCF2L-204ENST00000375608 KRTAP17-1Q9BYP8 105 aa6.47□□□□□ -1.37
MCF2L-204ENST00000375608 PKHD1L1Q86WI1 4243 aa6.37□□□□□ -1.39
MCF2L-204ENST00000375608 LPAP08519 4548 aa6.36□□□□□ -1.39
MCF2L-204ENST00000375608 EPPK1P58107 5090 aaKnown RBP6.34□□□□□ -1.39
MCF2L-204ENST00000375608 M0R2T5 61 aa6.3□□□□□ -1.4
MCF2L-204ENST00000375608 TNP1P09430 55 aa6.29□□□□□ -1.4
MCF2L-204ENST00000375608 PP632Q6XCG6 107 aa6.25□□□□□ -1.41
MCF2L-204ENST00000375608 TNXBP22105 4242 aa6.22□□□□□ -1.41
MCF2L-204ENST00000375608 HERC2O95714 4834 aa6.18□□□□□ -1.42
MCF2L-204ENST00000375608 KRTAP4-1Q9BYQ7 146 aa6.17□□□□□ -1.42
MCF2L-204ENST00000375608 BIRC6Q9NR09 4857 aa6.12□□□□□ -1.43
MCF2L-204ENST00000375608 ABCA13Q86UQ4 5058 aa6.1□□□□□ -1.43
MCF2L-204ENST00000375608 MUC2Q02817 5179 aa6.09□□□□□ -1.43
MCF2L-204ENST00000375608 HERC1Q15751 4861 aa5.95□□□□□ -1.46
MCF2L-204ENST00000375608 RNF213Q63HN8 5207 aa5.95□□□□□ -1.46
MCF2L-204ENST00000375608 KRTAP10-10P60014 251 aa5.91□□□□□ -1.46
MCF2L-204ENST00000375608 PCLOQ9Y6V0 5065 aa5.85□□□□□ -1.47
MCF2L-204ENST00000375608 FAT4Q6V0I7 4981 aa5.8□□□□□ -1.48
MCF2L-204ENST00000375608 LCE3AQ5TA76 89 aa5.79□□□□□ -1.48
MCF2L-204ENST00000375608 UBR4Q5T4S7 5183 aa5.76□□□□□ -1.49
MCF2L-204ENST00000375608 MUC17Q685J3 4493 aa5.68□□□□□ -1.5
MCF2L-204ENST00000375608 PRO2289Q9P1D8 64 aa5.67□□□□□ -1.5
MCF2L-204ENST00000375608 KRTAP19-2Q3LHN2 52 aa5.66□□□□□ -1.5
MCF2L-204ENST00000375608 FSIP2Q5CZC0 6907 aa5.65□□□□□ -1.5
MCF2L-204ENST00000375608 KRTAP23-1A1A580 65 aa5.59□□□□□ -1.52
MCF2L-204ENST00000375608 FLGP20930 4061 aaPredicted RBP5.58□□□□□ -1.52
MCF2L-204ENST00000375608 KRTAP19-1Q8IUB9 90 aa5.56□□□□□ -1.52
MCF2L-204ENST00000375608 KRTAP12-3P60328 96 aa5.53□□□□□ -1.52
MCF2L-204ENST00000375608 HMCN2Q8NDA2 5059 aa5.51□□□□□ -1.53
MCF2L-204ENST00000375608 SPRR2GQ9BYE4 73 aa5.51□□□□□ -1.53
MCF2L-204ENST00000375608 SPRR5A0A1B0GTR4 108 aa5.5□□□□□ -1.53
MCF2L-204ENST00000375608 KRTAP10-12P60413 245 aa5.5□□□□□ -1.53
MCF2L-204ENST00000375608 MT1FP04733 61 aa5.48□□□□□ -1.53
MCF2L-204ENST00000375608 MT2AP02795 61 aa5.45□□□□□ -1.54
MCF2L-204ENST00000375608 MT1HP80294 61 aa5.44□□□□□ -1.54
MCF2L-204ENST00000375608 LCE2CQ5TA81 110 aa5.41□□□□□ -1.54
MCF2L-204ENST00000375608 INE1O15225 51 aa5.36□□□□□ -1.55
MCF2L-204ENST00000375608 KRTAP8-1Q8IUC2 63 aa5.35□□□□□ -1.55
MCF2L-204ENST00000375608 KRTAP10-7P60409 375 aaPredicted RBP5.3□□□□□ -1.56
MCF2L-204ENST00000375608 USH2AO75445 5202 aa5.29□□□□□ -1.56
MCF2L-204ENST00000375608 MT1XP80297 61 aa5.26□□□□□ -1.57
MCF2L-204ENST00000375608 KRTAP10-5P60370 271 aa5.25□□□□□ -1.57
MCF2L-204ENST00000375608 KRTAP9-8Q9BYQ0 159 aa5.23□□□□□ -1.57
MCF2L-204ENST00000375608 MT1BP07438 61 aa5.23□□□□□ -1.57
MCF2L-204ENST00000375608 KRTAP19-5Q3LI72 72 aa5.17□□□□□ -1.58
MCF2L-204ENST00000375608 KRTAP19-8Q3LI54 63 aa5.15□□□□□ -1.58
MCF2L-204ENST00000375608 KMT2DO14686 5537 aa5.13□□□□□ -1.59
MCF2L-204ENST00000375608 KRTAP4-8A0A0G2JLE6 195 aa5.08□□□□□ -1.6
MCF2L-204ENST00000375608 KRTAP4-8Q9BYQ9 185 aa5.08□□□□□ -1.6
MCF2L-204ENST00000375608 LCE3CQ5T5A8 94 aa5.06□□□□□ -1.6
MCF2L-204ENST00000375608 CRCT1Q9UGL9 99 aa5.02□□□□□ -1.61
MCF2L-204ENST00000375608 KRTAP4-7Q9BYR0 210 aa5□□□□□ -1.61
MCF2L-204ENST00000375608 KRTAP9-3Q9BYQ3 159 aa4.98□□□□□ -1.61
MCF2L-204ENST00000375608 OBSCNQ5VST9 7968 aa4.91□□□□□ -1.62
MCF2L-204ENST00000375608 LCE2BO14633 110 aa4.87□□□□□ -1.63
MCF2L-204ENST00000375608 KRTAP9-6A8MVA2 160 aa4.82□□□□□ -1.64
MCF2L-204ENST00000375608 SYNE1Q8NF91 8797 aaKnown RBP4.82□□□□□ -1.64
MCF2L-204ENST00000375608 DSTQ03001 7570 aaKnown RBP4.82□□□□□ -1.64
MCF2L-204ENST00000375608 KRTAP9-2Q9BYQ4 174 aa4.76□□□□□ -1.65
MCF2L-204ENST00000375608 LCE2AQ5TA79 106 aaPredicted RBP4.72□□□□□ -1.65
MCF2L-204ENST00000375608 FCGBPQ9Y6R7 5405 aaPredicted RBP4.71□□□□□ -1.66
MCF2L-204ENST00000375608 KRTAP9-6A0A140TA67 174 aa4.68□□□□□ -1.66
MCF2L-204ENST00000375608 KRTAP19-7Q3SYF9 63 aa4.64□□□□□ -1.67
MCF2L-204ENST00000375608 LOC100996750A0A140TA64 210 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms