RNA–Protein interactions for RNA: ENST00000374864.8

ITCH-202, Transcript of itchy E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITCH, Length 6,401 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITCH-202ENST00000374864 Q6ZSA8 131 aa2.32□□□□□ -2.04
ITCH-202ENST00000374864 H1FX-AS1Q4G0G2 97 aa2.32□□□□□ -2.04
ITCH-202ENST00000374864 S4R3F8 94 aa2.31□□□□□ -2.04
ITCH-202ENST00000374864 LRP1Q07954 4544 aaKnown RBP2.3□□□□□ -2.04
ITCH-202ENST00000374864 COX6B2Q6YFQ2 88 aa2.3□□□□□ -2.04
ITCH-202ENST00000374864 PKD1P98161 4303 aa2.3□□□□□ -2.04
ITCH-202ENST00000374864 KMT2CQ8NEZ4 4911 aaKnown RBP2.3□□□□□ -2.04
ITCH-202ENST00000374864 A0A1B0GVY2 172 aa2.29□□□□□ -2.04
ITCH-202ENST00000374864 KRTAP19-4Q3LI73 84 aa2.28□□□□□ -2.04
ITCH-202ENST00000374864 KRTAP13-3Q3SY46 172 aa2.28□□□□□ -2.04
ITCH-202ENST00000374864 ASB16-AS1Q495Z4 193 aa2.28□□□□□ -2.04
ITCH-202ENST00000374864 P0C880 135 aa2.28□□□□□ -2.05
ITCH-202ENST00000374864 KRTAP10-8P60410 259 aa2.28□□□□□ -2.05
ITCH-202ENST00000374864 A8MUU9 505 aa2.27□□□□□ -2.05
ITCH-202ENST00000374864 SACSQ9NZJ4 4579 aa2.27□□□□□ -2.05
ITCH-202ENST00000374864 KRTAP3-1Q9BYR8 98 aa2.27□□□□□ -2.05
ITCH-202ENST00000374864 XP32Q5T750 250 aa2.26□□□□□ -2.05
ITCH-202ENST00000374864 PKHD1L1Q86WI1 4243 aa2.26□□□□□ -2.05
ITCH-202ENST00000374864 HSPG2P98160 4391 aa2.26□□□□□ -2.05
ITCH-202ENST00000374864 KRTAP25-1Q3LHN0 102 aa2.25□□□□□ -2.05
ITCH-202ENST00000374864 CAMK2N1Q7Z7J9 78 aa2.25□□□□□ -2.05
ITCH-202ENST00000374864 M0QZ58 72 aa2.25□□□□□ -2.05
ITCH-202ENST00000374864 ROMO1P60602 79 aa2.24□□□□□ -2.05
ITCH-202ENST00000374864 KRTAP13-4Q3LI77 160 aa2.24□□□□□ -2.05
ITCH-202ENST00000374864 RPL37P61927 97 aaKnown RBP2.23□□□□□ -2.05
ITCH-202ENST00000374864 APOBP04114 4563 aaKnown RBP2.23□□□□□ -2.05
ITCH-202ENST00000374864 KRTAP15-1Q3LI76 137 aa2.22□□□□□ -2.05
ITCH-202ENST00000374864 LUZP6Q538Z0 58 aa2.22□□□□□ -2.05
ITCH-202ENST00000374864 RYR3Q15413 4870 aa2.22□□□□□ -2.05
ITCH-202ENST00000374864 KRTAP12-2P59991 146 aa2.22□□□□□ -2.05
ITCH-202ENST00000374864 DYNC1H1Q14204 4646 aaKnown RBP2.22□□□□□ -2.05
ITCH-202ENST00000374864 R4GN34 69 aa2.22□□□□□ -2.05
ITCH-202ENST00000374864 M0R2T5 61 aa2.2□□□□□ -2.06
ITCH-202ENST00000374864 KRTAP4-5Q9BYR2 181 aa2.19□□□□□ -2.06
ITCH-202ENST00000374864 RYR2Q92736 4967 aa2.19□□□□□ -2.06
ITCH-202ENST00000374864 TPRXLQ17RH7 258 aa2.19□□□□□ -2.06
ITCH-202ENST00000374864 C20orf166-AS1Q96NR2 134 aa2.17□□□□□ -2.06
ITCH-202ENST00000374864 TNXBP22105 4242 aa2.15□□□□□ -2.07
ITCH-202ENST00000374864 LRP2P98164 4655 aa2.15□□□□□ -2.07
ITCH-202ENST00000374864 EPPK1P58107 5090 aaKnown RBP2.15□□□□□ -2.07
ITCH-202ENST00000374864 KRTAP10-6P60371 365 aaPredicted RBP2.12□□□□□ -2.07
ITCH-202ENST00000374864 KIAA1109Q2LD37 5005 aa2.12□□□□□ -2.07
ITCH-202ENST00000374864 MUC2Q02817 5179 aa2.1□□□□□ -2.07
ITCH-202ENST00000374864 KRTAP12-1P59990 96 aa2.1□□□□□ -2.07
ITCH-202ENST00000374864 KRTAP10-4P60372 401 aaPredicted RBP2.08□□□□□ -2.08
ITCH-202ENST00000374864 RYR1P21817 5038 aa2.08□□□□□ -2.08
ITCH-202ENST00000374864 RPS29P62273 56 aaKnown RBP2.05□□□□□ -2.08
ITCH-202ENST00000374864 PLAC4Q8WY50 150 aa2.04□□□□□ -2.08
ITCH-202ENST00000374864 MT1HL1P0DM35 61 aa2.03□□□□□ -2.08
ITCH-202ENST00000374864 KRTAP4-1Q9BYQ7 146 aa2.03□□□□□ -2.08
ITCH-202ENST00000374864 BIRC6Q9NR09 4857 aa2.01□□□□□ -2.09
ITCH-202ENST00000374864 ABCA13Q86UQ4 5058 aa2.01□□□□□ -2.09
ITCH-202ENST00000374864 HERC2O95714 4834 aa2.01□□□□□ -2.09
ITCH-202ENST00000374864 KRTAP10-10P60014 251 aa1.98□□□□□ -2.09
ITCH-202ENST00000374864 PCLOQ9Y6V0 5065 aa1.96□□□□□ -2.09
ITCH-202ENST00000374864 HERC1Q15751 4861 aa1.95□□□□□ -2.1
ITCH-202ENST00000374864 TNP1P09430 55 aa1.95□□□□□ -2.1
ITCH-202ENST00000374864 LCE3BQ5TA77 95 aa1.92□□□□□ -2.1
ITCH-202ENST00000374864 MUC17Q685J3 4493 aa1.92□□□□□ -2.1
ITCH-202ENST00000374864 FAT4Q6V0I7 4981 aa1.92□□□□□ -2.1
ITCH-202ENST00000374864 LCE3AQ5TA76 89 aa1.87□□□□□ -2.11
ITCH-202ENST00000374864 CRCT1Q9UGL9 99 aa1.87□□□□□ -2.11
ITCH-202ENST00000374864 MT3P25713 68 aa1.87□□□□□ -2.11
ITCH-202ENST00000374864 FLGP20930 4061 aaPredicted RBP1.87□□□□□ -2.11
ITCH-202ENST00000374864 LCE4AQ5TA78 99 aa1.85□□□□□ -2.11
ITCH-202ENST00000374864 PRO2289Q9P1D8 64 aa1.85□□□□□ -2.11
ITCH-202ENST00000374864 KMT2DO14686 5537 aa1.85□□□□□ -2.11
ITCH-202ENST00000374864 FSIP2Q5CZC0 6907 aa1.84□□□□□ -2.11
ITCH-202ENST00000374864 UBR4Q5T4S7 5183 aa1.83□□□□□ -2.12
ITCH-202ENST00000374864 HMCN2Q8NDA2 5059 aa1.82□□□□□ -2.12
ITCH-202ENST00000374864 RNF213Q63HN8 5207 aa1.82□□□□□ -2.12
ITCH-202ENST00000374864 KRTAP9-6A0A140TA67 174 aa1.8□□□□□ -2.12
ITCH-202ENST00000374864 KRTAP9-7A8MTY7 169 aa1.8□□□□□ -2.12
ITCH-202ENST00000374864 MT1FP04733 61 aa1.77□□□□□ -2.13
ITCH-202ENST00000374864 PP632Q6XCG6 107 aa1.77□□□□□ -2.13
ITCH-202ENST00000374864 MT1HP80294 61 aa1.77□□□□□ -2.13
ITCH-202ENST00000374864 KRTAP10-7P60409 375 aaPredicted RBP1.74□□□□□ -2.13
ITCH-202ENST00000374864 KRTAP10-12P60413 245 aa1.74□□□□□ -2.13
ITCH-202ENST00000374864 USH2AO75445 5202 aa1.74□□□□□ -2.13
ITCH-202ENST00000374864 KRTAP4-8A0A0G2JLE6 195 aa1.73□□□□□ -2.13
ITCH-202ENST00000374864 KRTAP19-1Q8IUB9 90 aa1.73□□□□□ -2.13
ITCH-202ENST00000374864 KRTAP9-4Q9BYQ2 154 aa1.73□□□□□ -2.13
ITCH-202ENST00000374864 KRTAP4-8Q9BYQ9 185 aa1.73□□□□□ -2.13
ITCH-202ENST00000374864 MT2AP02795 61 aa1.72□□□□□ -2.13
ITCH-202ENST00000374864 KRTAP4-7Q9BYR0 210 aa1.72□□□□□ -2.13
ITCH-202ENST00000374864 KRTAP12-3P60328 96 aa1.72□□□□□ -2.13
ITCH-202ENST00000374864 KRTAP19-2Q3LHN2 52 aa1.7□□□□□ -2.14
ITCH-202ENST00000374864 KRTAP19-5Q3LI72 72 aa1.68□□□□□ -2.14
ITCH-202ENST00000374864 LOC100996750A0A140TA64 210 aa1.67□□□□□ -2.14
ITCH-202ENST00000374864 KRTAP4-6Q9BYQ5 205 aa1.67□□□□□ -2.14
ITCH-202ENST00000374864 SYNE2Q8WXH0 6885 aaKnown RBP1.66□□□□□ -2.14
ITCH-202ENST00000374864 KRTAP9-2Q9BYQ4 174 aa1.66□□□□□ -2.14
ITCH-202ENST00000374864 KRTAP10-5P60370 271 aa1.64□□□□□ -2.15
ITCH-202ENST00000374864 MT1XP80297 61 aa1.64□□□□□ -2.15
ITCH-202ENST00000374864 KRTAP9-8Q9BYQ0 159 aa1.64□□□□□ -2.15
ITCH-202ENST00000374864 LCE5AQ5TCM9 118 aa1.64□□□□□ -2.15
ITCH-202ENST00000374864 LCE1DQ5T752 114 aa1.63□□□□□ -2.15
ITCH-202ENST00000374864 SPRR2GQ9BYE4 73 aa1.63□□□□□ -2.15
ITCH-202ENST00000374864 KRTAP9-3Q9BYQ3 159 aa1.63□□□□□ -2.15
ITCH-202ENST00000374864 KRTAP5-2Q701N4 177 aa1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms