RNA–Protein interactions for RNA: ENST00000374864.8

ITCH-202, Transcript of itchy E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITCH, Length 6,401 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITCH-202ENST00000374864 NISCHQ9Y2I1 1504 aa7.79□□□□□ -1.16
ITCH-202ENST00000374864 SHROOM4Q9ULL8 1493 aa7.72□□□□□ -1.17
ITCH-202ENST00000374864 DCAF8L2P0C7V8 631 aa7.72□□□□□ -1.17
ITCH-202ENST00000374864 SUPT5HO00267 1087 aaKnown RBP7.63□□□□□ -1.19
ITCH-202ENST00000374864 EHMT2Q96KQ7 1210 aa7.63□□□□□ -1.19
ITCH-202ENST00000374864 CHIC1Q5VXU3 224 aa7.58□□□□□ -1.2
ITCH-202ENST00000374864 TTBK1Q5TCY1 1321 aaPredicted RBP7.32□□□□□ -1.24
ITCH-202ENST00000374864 AEBP2Q6ZN18 517 aaPredicted RBP7.3□□□□□ -1.24
ITCH-202ENST00000374864 PCGF6Q9BYE7 350 aa7.3□□□□□ -1.24
ITCH-202ENST00000374864 PPARGC1BQ86YN6 1023 aaKnown RBP7.28□□□□□ -1.24
ITCH-202ENST00000374864 FAM9AQ8IZU1 332 aaPredicted RBP7.24□□□□□ -1.25
ITCH-202ENST00000374864 LOC105371045A0A1W2PR82 267 aa7.15□□□□□ -1.26
ITCH-202ENST00000374864 RANGAP1P46060 587 aaPredicted RBP7.05□□□□□ -1.28
ITCH-202ENST00000374864 YTHDC1Q96MU7 727 aaKnown RBP6.94□□□□□ -1.3
ITCH-202ENST00000374864 HRCP23327 699 aa6.92□□□□□ -1.3
ITCH-202ENST00000374864 MYO15BQ96JP2 1530 aa6.89□□□□□ -1.31
ITCH-202ENST00000374864 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.83□□□□□ -1.32
ITCH-202ENST00000374864 TRIM41Q8WV44 630 aa6.82□□□□□ -1.32
ITCH-202ENST00000374864 CCER1Q8TC90 406 aaPredicted RBP6.8□□□□□ -1.32
ITCH-202ENST00000374864 CCDC180Q9P1Z9 1646 aa6.75□□□□□ -1.33
ITCH-202ENST00000374864 TRIM26Q12899 539 aaPredicted RBP6.71□□□□□ -1.34
ITCH-202ENST00000374864 HNRNPUL2Q1KMD3 747 aaKnown RBP6.69□□□□□ -1.34
ITCH-202ENST00000374864 ITGAEP38570 1179 aa6.68□□□□□ -1.34
ITCH-202ENST00000374864 CNGB1Q14028 1251 aaPredicted RBP6.67□□□□□ -1.34
ITCH-202ENST00000374864 UBTFP17480 764 aaKnown RBP6.67□□□□□ -1.34
ITCH-202ENST00000374864 ABCC9O60706 1549 aa6.66□□□□□ -1.34
ITCH-202ENST00000374864 ATP1B4Q9UN42 357 aaPredicted RBP6.66□□□□□ -1.34
ITCH-202ENST00000374864 SCAF1Q9H7N4 1312 aaKnown RBP6.64□□□□□ -1.35
ITCH-202ENST00000374864 GTF3C3Q9Y5Q9 886 aa6.62□□□□□ -1.35
ITCH-202ENST00000374864 PHF23Q9BUL5 403 aaPredicted RBP6.59□□□□□ -1.35
ITCH-202ENST00000374864 BCANQ96GW7 911 aa6.59□□□□□ -1.35
ITCH-202ENST00000374864 PABPN1Q86U42 306 aaKnown RBP eCLIP6.57□□□□□ -1.36
ITCH-202ENST00000374864 DIEXFQ68CQ4 756 aaKnown RBP6.56□□□□□ -1.36
ITCH-202ENST00000374864 NEUROD1Q13562 356 aa6.56□□□□□ -1.36
ITCH-202ENST00000374864 PLPPR3Q6T4P5 718 aa6.54□□□□□ -1.36
ITCH-202ENST00000374864 SENP3-EIF4A1A0A087X0R7 540 aa6.52□□□□□ -1.37
ITCH-202ENST00000374864 APLP2Q06481 763 aa6.51□□□□□ -1.37
ITCH-202ENST00000374864 SCRIBQ14160 1630 aa6.51□□□□□ -1.37
ITCH-202ENST00000374864 ZCCHC6Q5VYS8 1495 aaKnown RBP6.5□□□□□ -1.37
ITCH-202ENST00000374864 HIRIP3Q9BW71 556 aaPredicted RBP6.49□□□□□ -1.37
ITCH-202ENST00000374864 CENPBP07199 599 aaPredicted RBP6.49□□□□□ -1.37
ITCH-202ENST00000374864 ZEB1P37275 1124 aaPredicted RBP6.47□□□□□ -1.37
ITCH-202ENST00000374864 ARID3CA6NKF2 412 aa6.44□□□□□ -1.38
ITCH-202ENST00000374864 POLR3GLQ9BT43 218 aa6.44□□□□□ -1.38
ITCH-202ENST00000374864 ACIN1Q9UKV3 1341 aaKnown RBP6.43□□□□□ -1.38
ITCH-202ENST00000374864 P3H3Q8IVL6 736 aa6.42□□□□□ -1.38
ITCH-202ENST00000374864 MIER1Q8N108 512 aa6.42□□□□□ -1.38
ITCH-202ENST00000374864 SENP3Q9H4L4 574 aaPredicted RBP6.39□□□□□ -1.39
ITCH-202ENST00000374864 IRX6P78412 446 aaPredicted RBP6.38□□□□□ -1.39
ITCH-202ENST00000374864 MYT1Q01538 1121 aa6.37□□□□□ -1.39
ITCH-202ENST00000374864 FAM50AQ14320 339 aaKnown RBP6.35□□□□□ -1.39
ITCH-202ENST00000374864 NACADO15069 1562 aa6.35□□□□□ -1.39
ITCH-202ENST00000374864 DCAF1Q9Y4B6 1507 aa6.34□□□□□ -1.39
ITCH-202ENST00000374864 RB1CC1Q8TDY2 1594 aa6.33□□□□□ -1.4
ITCH-202ENST00000374864 ZNF316A6NFI3 1004 aaPredicted RBP6.33□□□□□ -1.4
ITCH-202ENST00000374864 KCNH8Q96L42 1107 aa6.32□□□□□ -1.4
ITCH-202ENST00000374864 TRIM52Q96A61 297 aa6.31□□□□□ -1.4
ITCH-202ENST00000374864 ABCC8Q09428 1581 aa6.29□□□□□ -1.4
ITCH-202ENST00000374864 CECR2Q9BXF3 1484 aa6.29□□□□□ -1.4
ITCH-202ENST00000374864 PELP1Q8IZL8 1130 aaKnown RBP6.28□□□□□ -1.4
ITCH-202ENST00000374864 DDX10Q13206 875 aaKnown RBP6.28□□□□□ -1.4
ITCH-202ENST00000374864 ERICH6Q7L0X2 663 aa6.27□□□□□ -1.4
ITCH-202ENST00000374864 FKBP8Q14318 412 aa6.26□□□□□ -1.41
ITCH-202ENST00000374864 RSF1Q96T23 1441 aaPredicted RBP6.26□□□□□ -1.41
ITCH-202ENST00000374864 ZNF326Q5BKZ1 582 aaKnown RBP6.25□□□□□ -1.41
ITCH-202ENST00000374864 UNC13AQ9UPW8 1703 aa6.25□□□□□ -1.41
ITCH-202ENST00000374864 SALL2Q9Y467 1007 aaPredicted RBP6.25□□□□□ -1.41
ITCH-202ENST00000374864 SOGA1O94964 1423 aa6.24□□□□□ -1.41
ITCH-202ENST00000374864 CSRNP3Q8WYN3 585 aa6.23□□□□□ -1.41
ITCH-202ENST00000374864 RUSC2Q8N2Y8 1516 aa6.23□□□□□ -1.41
ITCH-202ENST00000374864 WIZO95785 1651 aa6.22□□□□□ -1.41
ITCH-202ENST00000374864 SIN3AQ96ST3 1273 aa6.22□□□□□ -1.41
ITCH-202ENST00000374864 NEFLP07196 543 aa6.21□□□□□ -1.41
ITCH-202ENST00000374864 BCL11AQ9H165 835 aa6.21□□□□□ -1.42
ITCH-202ENST00000374864 CHIC2Q9UKJ5 165 aa6.2□□□□□ -1.42
ITCH-202ENST00000374864 CCDC88BA6NC98 1476 aa6.18□□□□□ -1.42
ITCH-202ENST00000374864 NBR1Q14596 966 aa6.18□□□□□ -1.42
ITCH-202ENST00000374864 CEP162Q5TB80 1403 aa6.18□□□□□ -1.42
ITCH-202ENST00000374864 KCNA4P22459 653 aa6.18□□□□□ -1.42
ITCH-202ENST00000374864 BICRAQ9NZM4 1560 aa6.17□□□□□ -1.42
ITCH-202ENST00000374864 KANK4Q5T7N3 995 aaPredicted RBP6.17□□□□□ -1.42
ITCH-202ENST00000374864 MROH2BQ7Z745 1585 aa6.17□□□□□ -1.42
ITCH-202ENST00000374864 FAM9BQ8IZU0 186 aa6.16□□□□□ -1.42
ITCH-202ENST00000374864 NPM2Q86SE8 214 aaKnown RBP6.16□□□□□ -1.42
ITCH-202ENST00000374864 BAZ1BQ9UIG0 1483 aaKnown RBP6.16□□□□□ -1.42
ITCH-202ENST00000374864 SUPT16HQ9Y5B9 1047 aaKnown RBP6.15□□□□□ -1.43
ITCH-202ENST00000374864 FOXD1Q16676 465 aa6.13□□□□□ -1.43
ITCH-202ENST00000374864 SLC4A1APQ9BWU0 796 aaKnown RBP6.13□□□□□ -1.43
ITCH-202ENST00000374864 ADRA2BP18089 450 aa6.12□□□□□ -1.43
ITCH-202ENST00000374864 HNRNPUQ00839 825 aaKnown RBP eCLIP6.12□□□□□ -1.43
ITCH-202ENST00000374864 FBLN2P98095 1184 aa6.11□□□□□ -1.43
ITCH-202ENST00000374864 RTN4Q9NQC3 1192 aaKnown RBP6.1□□□□□ -1.43
ITCH-202ENST00000374864 RRP7BPQ9NSQ0 103 aa6.1□□□□□ -1.43
ITCH-202ENST00000374864 ZNF777Q9ULD5 760 aaPredicted RBP6.1□□□□□ -1.43
ITCH-202ENST00000374864 ANP32CO43423 234 aa6.09□□□□□ -1.43
ITCH-202ENST00000374864 ARXQ96QS3 562 aa6.09□□□□□ -1.43
ITCH-202ENST00000374864 CLIP1P30622 1438 aa6.07□□□□□ -1.44
ITCH-202ENST00000374864 MYT1LQ9UL68 1186 aa6.07□□□□□ -1.44
ITCH-202ENST00000374864 KDM2AQ9Y2K7 1162 aa6.06□□□□□ -1.44
ITCH-202ENST00000374864 B4GALNT3Q6L9W6 998 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms