RNA–Protein interactions for RNA: ENST00000374257.5

PTBP3-205, Transcript of polypyrimidine tract binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene PTBP3, Length 7,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP3-205ENST00000374257 HERC2O95714 4834 aa3.87□□□□□ -1.79
PTBP3-205ENST00000374257 LRP1BQ9NZR2 4599 aa3.87□□□□□ -1.79
PTBP3-205ENST00000374257 VPS13CQ709C8 3753 aa3.86□□□□□ -1.79
PTBP3-205ENST00000374257 STARD9Q9P2P6 4700 aa3.86□□□□□ -1.79
PTBP3-205ENST00000374257 FAT1Q14517 4588 aa3.86□□□□□ -1.79
PTBP3-205ENST00000374257 HYDINQ4G0P3 5121 aa3.84□□□□□ -1.79
PTBP3-205ENST00000374257 DNAH17Q9UFH2 4485 aa3.8□□□□□ -1.8
PTBP3-205ENST00000374257 SACSQ9NZJ4 4579 aa3.8□□□□□ -1.8
PTBP3-205ENST00000374257 DYNC2H1Q8NCM8 4307 aaKnown RBP3.78□□□□□ -1.8
PTBP3-205ENST00000374257 PCLOQ9Y6V0 5065 aa3.77□□□□□ -1.81
PTBP3-205ENST00000374257 KRTAP17-1Q9BYP8 105 aa3.76□□□□□ -1.81
PTBP3-205ENST00000374257 MT1HP80294 61 aa3.74□□□□□ -1.81
PTBP3-205ENST00000374257 KRTAP4-1Q9BYQ7 146 aa3.74□□□□□ -1.81
PTBP3-205ENST00000374257 FAT2Q9NYQ8 4349 aa3.72□□□□□ -1.81
PTBP3-205ENST00000374257 C10orf95Q9H7T3 257 aa3.71□□□□□ -1.81
PTBP3-205ENST00000374257 DNAH2Q9P225 4427 aa3.71□□□□□ -1.82
PTBP3-205ENST00000374257 KRTAP10-6P60371 365 aaPredicted RBP3.71□□□□□ -1.82
PTBP3-205ENST00000374257 KRTAP12-2P59991 146 aa3.7□□□□□ -1.82
PTBP3-205ENST00000374257 KRTAP13-4Q3LI77 160 aa3.7□□□□□ -1.82
PTBP3-205ENST00000374257 KRTAP12-1P59990 96 aa3.69□□□□□ -1.82
PTBP3-205ENST00000374257 APOBP04114 4563 aaKnown RBP3.68□□□□□ -1.82
PTBP3-205ENST00000374257 HERC1Q15751 4861 aa3.68□□□□□ -1.82
PTBP3-205ENST00000374257 KRTAP3-3Q9BYR6 98 aa3.67□□□□□ -1.82
PTBP3-205ENST00000374257 A0A0A0MQY5 61 aa3.67□□□□□ -1.82
PTBP3-205ENST00000374257 MT2AP02795 61 aa3.64□□□□□ -1.83
PTBP3-205ENST00000374257 ABCA13Q86UQ4 5058 aa3.63□□□□□ -1.83
PTBP3-205ENST00000374257 CSMD3Q7Z407 3707 aa3.62□□□□□ -1.83
PTBP3-205ENST00000374257 KRTAP3-2Q9BYR7 98 aa3.61□□□□□ -1.83
PTBP3-205ENST00000374257 KMT2CQ8NEZ4 4911 aaKnown RBP3.6□□□□□ -1.83
PTBP3-205ENST00000374257 KRTAP10-12P60413 245 aa3.6□□□□□ -1.83
PTBP3-205ENST00000374257 DNAH8Q96JB1 4490 aa3.59□□□□□ -1.84
PTBP3-205ENST00000374257 EPPK1P58107 5090 aaKnown RBP3.58□□□□□ -1.84
PTBP3-205ENST00000374257 DNAH3Q8TD57 4116 aa3.58□□□□□ -1.84
PTBP3-205ENST00000374257 LORP23490 312 aaPredicted RBP3.58□□□□□ -1.84
PTBP3-205ENST00000374257 KRTAP8-1Q8IUC2 63 aa3.56□□□□□ -1.84
PTBP3-205ENST00000374257 FAT3Q8TDW7 4589 aa3.54□□□□□ -1.84
PTBP3-205ENST00000374257 MT1FP04733 61 aa3.54□□□□□ -1.84
PTBP3-205ENST00000374257 DNAH6Q9C0G6 4158 aa3.54□□□□□ -1.84
PTBP3-205ENST00000374257 KRTAP15-1Q3LI76 137 aa3.53□□□□□ -1.84
PTBP3-205ENST00000374257 MYCBP2O75592 4640 aa3.51□□□□□ -1.85
PTBP3-205ENST00000374257 VPS13BQ7Z7G8 4022 aa3.5□□□□□ -1.85
PTBP3-205ENST00000374257 LRP1Q07954 4544 aaKnown RBP3.5□□□□□ -1.85
PTBP3-205ENST00000374257 LYSTQ99698 3801 aa3.49□□□□□ -1.85
PTBP3-205ENST00000374257 KMT2AQ03164 3969 aa3.49□□□□□ -1.85
PTBP3-205ENST00000374257 UBR4Q5T4S7 5183 aa3.48□□□□□ -1.85
PTBP3-205ENST00000374257 SPRR2GQ9BYE4 73 aa3.47□□□□□ -1.85
PTBP3-205ENST00000374257 HSPG2P98160 4391 aa3.44□□□□□ -1.86
PTBP3-205ENST00000374257 RNF213Q63HN8 5207 aa3.44□□□□□ -1.86
PTBP3-205ENST00000374257 LRP2P98164 4655 aa3.43□□□□□ -1.86
PTBP3-205ENST00000374257 CMYA5Q8N3K9 4069 aa3.42□□□□□ -1.86
PTBP3-205ENST00000374257 KRTAP12-3P60328 96 aa3.42□□□□□ -1.86
PTBP3-205ENST00000374257 DNAH7Q8WXX0 4024 aa3.4□□□□□ -1.87
PTBP3-205ENST00000374257 PKD1P98161 4303 aa3.4□□□□□ -1.87
PTBP3-205ENST00000374257 CRCT1Q9UGL9 99 aa3.4□□□□□ -1.87
PTBP3-205ENST00000374257 SPRR2FQ96RM1 72 aa3.39□□□□□ -1.87
PTBP3-205ENST00000374257 NDUFAF8A1L188 74 aa3.38□□□□□ -1.87
PTBP3-205ENST00000374257 PKHD1L1Q86WI1 4243 aa3.37□□□□□ -1.87
PTBP3-205ENST00000374257 LCE2CQ5TA81 110 aa3.36□□□□□ -1.87
PTBP3-205ENST00000374257 LCE3AQ5TA76 89 aa3.35□□□□□ -1.87
PTBP3-205ENST00000374257 KRTAP23-1A1A580 65 aa3.33□□□□□ -1.88
PTBP3-205ENST00000374257 KRTAP9-8Q9BYQ0 159 aa3.33□□□□□ -1.88
PTBP3-205ENST00000374257 KRTAP9-2Q9BYQ4 174 aa3.33□□□□□ -1.88
PTBP3-205ENST00000374257 KRTAP19-8Q3LI54 63 aa3.32□□□□□ -1.88
PTBP3-205ENST00000374257 HMCN2Q8NDA2 5059 aa3.3□□□□□ -1.88
PTBP3-205ENST00000374257 KRTAP19-1Q8IUB9 90 aa3.29□□□□□ -1.88
PTBP3-205ENST00000374257 KRTAP10-5P60370 271 aa3.27□□□□□ -1.89
PTBP3-205ENST00000374257 PKHD1P08F94 4074 aa3.27□□□□□ -1.89
PTBP3-205ENST00000374257 KRTAP9-3Q9BYQ3 159 aa3.27□□□□□ -1.89
PTBP3-205ENST00000374257 FAT4Q6V0I7 4981 aa3.25□□□□□ -1.89
PTBP3-205ENST00000374257 KRTAP9-6A0A140TA67 174 aa3.24□□□□□ -1.89
PTBP3-205ENST00000374257 SPRR2EP22531 72 aa3.23□□□□□ -1.89
PTBP3-205ENST00000374257 SPRR2BP35325 72 aa3.23□□□□□ -1.89
PTBP3-205ENST00000374257 SPRR2AP35326 72 aa3.23□□□□□ -1.89
PTBP3-205ENST00000374257 LCE2AQ5TA79 106 aaPredicted RBP3.23□□□□□ -1.89
PTBP3-205ENST00000374257 LCE2DQ5TA82 110 aaPredicted RBP3.23□□□□□ -1.89
PTBP3-205ENST00000374257 KRTAP19-2Q3LHN2 52 aa3.23□□□□□ -1.89
PTBP3-205ENST00000374257 KRTAP10-7P60409 375 aaPredicted RBP3.22□□□□□ -1.89
PTBP3-205ENST00000374257 HECTD4Q9Y4D8 3996 aa3.21□□□□□ -1.9
PTBP3-205ENST00000374257 MT1BP07438 61 aa3.21□□□□□ -1.9
PTBP3-205ENST00000374257 FRAS1Q86XX4 4008 aa3.21□□□□□ -1.9
PTBP3-205ENST00000374257 FSIP2Q5CZC0 6907 aa3.2□□□□□ -1.9
PTBP3-205ENST00000374257 LCE2BO14633 110 aa3.15□□□□□ -1.9
PTBP3-205ENST00000374257 KRTAP19-5Q3LI72 72 aa3.15□□□□□ -1.91
PTBP3-205ENST00000374257 SPRR2DP22532 72 aa3.14□□□□□ -1.91
PTBP3-205ENST00000374257 H3BS24 57 aa3.13□□□□□ -1.91
PTBP3-205ENST00000374257 MUC17Q685J3 4493 aa3.13□□□□□ -1.91
PTBP3-205ENST00000374257 MT1XP80297 61 aa3.13□□□□□ -1.91
PTBP3-205ENST00000374257 KRTAP19-4Q3LI73 84 aa3.13□□□□□ -1.91
PTBP3-205ENST00000374257 KRTAP19-6Q3LI70 58 aa3.11□□□□□ -1.91
PTBP3-205ENST00000374257 LPAP08519 4548 aa3.09□□□□□ -1.92
PTBP3-205ENST00000374257 TNXBP22105 4242 aa3.02□□□□□ -1.93
PTBP3-205ENST00000374257 MT1GP13640 62 aa3.02□□□□□ -1.93
PTBP3-205ENST00000374257 KRTAP4-8A0A0G2JLE6 195 aa3.01□□□□□ -1.93
PTBP3-205ENST00000374257 KRTAP4-8Q9BYQ9 185 aa3.01□□□□□ -1.93
PTBP3-205ENST00000374257 SYNE2Q8WXH0 6885 aaKnown RBP3.01□□□□□ -1.93
PTBP3-205ENST00000374257 KRTAP9-7A8MTY7 169 aa3□□□□□ -1.93
PTBP3-205ENST00000374257 FLGP20930 4061 aaPredicted RBP3□□□□□ -1.93
PTBP3-205ENST00000374257 MUC2Q02817 5179 aa2.98□□□□□ -1.93
PTBP3-205ENST00000374257 LCE3CQ5T5A8 94 aa2.98□□□□□ -1.93
PTBP3-205ENST00000374257 KRTAP12-4P60329 112 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms