RNA–Protein interactions for RNA: ENST00000373741.8

PUM1-202, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 1 (best) BASIC

Gene PUM1, Length 4,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-202ENST00000373741 A0A0D9SG42 100 aa6.39□□□□□ -1.39
PUM1-202ENST00000373741 KRTAP13-3Q3SY46 172 aa6.38□□□□□ -1.39
PUM1-202ENST00000373741 KRTAP4-5Q9BYR2 181 aa6.37□□□□□ -1.39
PUM1-202ENST00000373741 FAT3Q8TDW7 4589 aa6.35□□□□□ -1.39
PUM1-202ENST00000373741 KRTAP17-1Q9BYP8 105 aa6.35□□□□□ -1.39
PUM1-202ENST00000373741 H0YAA0 97 aa6.33□□□□□ -1.4
PUM1-202ENST00000373741 H1FX-AS1Q4G0G2 97 aa6.33□□□□□ -1.4
PUM1-202ENST00000373741 NDUFAF8A1L188 74 aa6.33□□□□□ -1.4
PUM1-202ENST00000373741 HSPG2P98160 4391 aa6.32□□□□□ -1.4
PUM1-202ENST00000373741 KRTAP10-8P60410 259 aa6.29□□□□□ -1.4
PUM1-202ENST00000373741 RPS29P62273 56 aaKnown RBP6.29□□□□□ -1.4
PUM1-202ENST00000373741 KRTAP16-1A8MUX0 517 aa6.27□□□□□ -1.41
PUM1-202ENST00000373741 RPL37P61927 97 aaKnown RBP6.21□□□□□ -1.42
PUM1-202ENST00000373741 P0C880 135 aa6.2□□□□□ -1.42
PUM1-202ENST00000373741 MT1HL1P0DM35 61 aa6.2□□□□□ -1.42
PUM1-202ENST00000373741 COX6B2Q6YFQ2 88 aa6.17□□□□□ -1.42
PUM1-202ENST00000373741 C10orf95Q9H7T3 257 aa6.16□□□□□ -1.42
PUM1-202ENST00000373741 HERC2O95714 4834 aa6.16□□□□□ -1.42
PUM1-202ENST00000373741 XP32Q5T750 250 aa6.16□□□□□ -1.42
PUM1-202ENST00000373741 C20orf166-AS1Q96NR2 134 aa6.16□□□□□ -1.42
PUM1-202ENST00000373741 PKHD1L1Q86WI1 4243 aa6.14□□□□□ -1.43
PUM1-202ENST00000373741 A0A0A0MQY5 61 aa6.12□□□□□ -1.43
PUM1-202ENST00000373741 ABCA13Q86UQ4 5058 aa6.1□□□□□ -1.43
PUM1-202ENST00000373741 LRP2P98164 4655 aa6.07□□□□□ -1.44
PUM1-202ENST00000373741 TNXBP22105 4242 aa6.02□□□□□ -1.45
PUM1-202ENST00000373741 LPAP08519 4548 aa6.02□□□□□ -1.45
PUM1-202ENST00000373741 TPRXLQ17RH7 258 aa6.01□□□□□ -1.45
PUM1-202ENST00000373741 LUZP6Q538Z0 58 aa6.01□□□□□ -1.45
PUM1-202ENST00000373741 BIRC6Q9NR09 4857 aa6□□□□□ -1.45
PUM1-202ENST00000373741 SEC61BP60468 96 aaKnown RBP5.97□□□□□ -1.45
PUM1-202ENST00000373741 HERC1Q15751 4861 aa5.93□□□□□ -1.46
PUM1-202ENST00000373741 S4R3F8 94 aa5.92□□□□□ -1.46
PUM1-202ENST00000373741 KRTAP3-1Q9BYR8 98 aa5.91□□□□□ -1.46
PUM1-202ENST00000373741 PCLOQ9Y6V0 5065 aa5.87□□□□□ -1.47
PUM1-202ENST00000373741 KRTAP15-1Q3LI76 137 aa5.84□□□□□ -1.47
PUM1-202ENST00000373741 MUC2Q02817 5179 aa5.83□□□□□ -1.48
PUM1-202ENST00000373741 KRTAP13-4Q3LI77 160 aa5.82□□□□□ -1.48
PUM1-202ENST00000373741 KRTAP12-2P59991 146 aa5.76□□□□□ -1.49
PUM1-202ENST00000373741 M0R2T5 61 aa5.75□□□□□ -1.49
PUM1-202ENST00000373741 KRTAP10-6P60371 365 aaPredicted RBP5.74□□□□□ -1.49
PUM1-202ENST00000373741 PLAC4Q8WY50 150 aa5.72□□□□□ -1.49
PUM1-202ENST00000373741 RNF213Q63HN8 5207 aa5.71□□□□□ -1.5
PUM1-202ENST00000373741 KRTAP4-1Q9BYQ7 146 aa5.71□□□□□ -1.5
PUM1-202ENST00000373741 M0QZ58 72 aa5.7□□□□□ -1.5
PUM1-202ENST00000373741 R4GN34 69 aa5.69□□□□□ -1.5
PUM1-202ENST00000373741 KRTAP12-1P59990 96 aa5.65□□□□□ -1.51
PUM1-202ENST00000373741 UBR4Q5T4S7 5183 aa5.64□□□□□ -1.51
PUM1-202ENST00000373741 KRTAP3-3Q9BYR6 98 aa5.63□□□□□ -1.51
PUM1-202ENST00000373741 CAMK2N1Q7Z7J9 78 aa5.61□□□□□ -1.51
PUM1-202ENST00000373741 KRTAP3-2Q9BYR7 98 aa5.61□□□□□ -1.51
PUM1-202ENST00000373741 FAT4Q6V0I7 4981 aa5.57□□□□□ -1.52
PUM1-202ENST00000373741 HMCN2Q8NDA2 5059 aa5.56□□□□□ -1.52
PUM1-202ENST00000373741 MUC17Q685J3 4493 aa5.4□□□□□ -1.55
PUM1-202ENST00000373741 LORP23490 312 aaPredicted RBP5.39□□□□□ -1.55
PUM1-202ENST00000373741 PP632Q6XCG6 107 aa5.36□□□□□ -1.55
PUM1-202ENST00000373741 KRTAP10-10P60014 251 aa5.35□□□□□ -1.55
PUM1-202ENST00000373741 FLGP20930 4061 aaPredicted RBP5.26□□□□□ -1.57
PUM1-202ENST00000373741 KRTAP19-2Q3LHN2 52 aa5.26□□□□□ -1.57
PUM1-202ENST00000373741 MT1HP80294 61 aa5.25□□□□□ -1.57
PUM1-202ENST00000373741 TNP1P09430 55 aa5.23□□□□□ -1.57
PUM1-202ENST00000373741 LCE2CQ5TA81 110 aa5.22□□□□□ -1.57
PUM1-202ENST00000373741 FSIP2Q5CZC0 6907 aa5.13□□□□□ -1.59
PUM1-202ENST00000373741 MT1FP04733 61 aa5.09□□□□□ -1.59
PUM1-202ENST00000373741 MT2AP02795 61 aa5.08□□□□□ -1.6
PUM1-202ENST00000373741 PRO2289Q9P1D8 64 aa5.01□□□□□ -1.61
PUM1-202ENST00000373741 KRTAP9-8Q9BYQ0 159 aa4.99□□□□□ -1.61
PUM1-202ENST00000373741 KRTAP19-1Q8IUB9 90 aa4.95□□□□□ -1.62
PUM1-202ENST00000373741 USH2AO75445 5202 aa4.95□□□□□ -1.62
PUM1-202ENST00000373741 SPRR2GQ9BYE4 73 aa4.9□□□□□ -1.62
PUM1-202ENST00000373741 INE1O15225 51 aa4.86□□□□□ -1.63
PUM1-202ENST00000373741 KRTAP9-3Q9BYQ3 159 aa4.79□□□□□ -1.64
PUM1-202ENST00000373741 LCE2AQ5TA79 106 aaPredicted RBP4.78□□□□□ -1.64
PUM1-202ENST00000373741 MT1BP07438 61 aa4.74□□□□□ -1.65
PUM1-202ENST00000373741 KRTAP23-1A1A580 65 aa4.73□□□□□ -1.65
PUM1-202ENST00000373741 LCE2BO14633 110 aa4.73□□□□□ -1.65
PUM1-202ENST00000373741 SPRR5A0A1B0GTR4 108 aa4.71□□□□□ -1.65
PUM1-202ENST00000373741 LCE3AQ5TA76 89 aa4.7□□□□□ -1.66
PUM1-202ENST00000373741 KRTAP19-8Q3LI54 63 aa4.69□□□□□ -1.66
PUM1-202ENST00000373741 MT1XP80297 61 aa4.64□□□□□ -1.67
PUM1-202ENST00000373741 KMT2DO14686 5537 aa4.64□□□□□ -1.67
PUM1-202ENST00000373741 KRTAP10-5P60370 271 aa4.62□□□□□ -1.67
PUM1-202ENST00000373741 KRTAP10-12P60413 245 aa4.62□□□□□ -1.67
PUM1-202ENST00000373741 KRTAP10-7P60409 375 aaPredicted RBP4.59□□□□□ -1.67
PUM1-202ENST00000373741 KRTAP12-3P60328 96 aa4.51□□□□□ -1.69
PUM1-202ENST00000373741 SSPOA2VEC9 5147 aa4.5□□□□□ -1.69
PUM1-202ENST00000373741 KRTAP4-8A0A0G2JLE6 195 aa4.49□□□□□ -1.69
PUM1-202ENST00000373741 KRTAP4-8Q9BYQ9 185 aa4.49□□□□□ -1.69
PUM1-202ENST00000373741 KRTAP8-1Q8IUC2 63 aa4.38□□□□□ -1.71
PUM1-202ENST00000373741 KRTAP19-5Q3LI72 72 aa4.37□□□□□ -1.71
PUM1-202ENST00000373741 FCGBPQ9Y6R7 5405 aaPredicted RBP4.31□□□□□ -1.72
PUM1-202ENST00000373741 KRTAP9-2Q9BYQ4 174 aa4.31□□□□□ -1.72
PUM1-202ENST00000373741 DSTQ03001 7570 aaKnown RBP4.28□□□□□ -1.72
PUM1-202ENST00000373741 MUC12Q9UKN1 5478 aa4.26□□□□□ -1.73
PUM1-202ENST00000373741 KRTAP19-6Q3LI70 58 aa4.25□□□□□ -1.73
PUM1-202ENST00000373741 MACF1Q9UPN3 7388 aaKnown RBP4.25□□□□□ -1.73
PUM1-202ENST00000373741 SYNE2Q8WXH0 6885 aaKnown RBP4.24□□□□□ -1.73
PUM1-202ENST00000373741 LCE2DQ5TA82 110 aaPredicted RBP4.21□□□□□ -1.74
PUM1-202ENST00000373741 SPRR2FQ96RM1 72 aa4.2□□□□□ -1.74
PUM1-202ENST00000373741 CRCT1Q9UGL9 99 aa4.18□□□□□ -1.74
PUM1-202ENST00000373741 KRTAP4-7Q9BYR0 210 aa4.15□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms