RNA–Protein interactions for RNA: ENST00000373493.9

RBBP4-202, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RBBP4, Length 7,943 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-202ENST00000373493 HUWE1Q7Z6Z7 4374 aaKnown RBP3.45□□□□□ -1.86
RBBP4-202ENST00000373493 RYR1P21817 5038 aa3.44□□□□□ -1.86
RBBP4-202ENST00000373493 KRTAP19-4Q3LI73 84 aa3.43□□□□□ -1.86
RBBP4-202ENST00000373493 BIRC6Q9NR09 4857 aa3.42□□□□□ -1.86
RBBP4-202ENST00000373493 LYSTQ99698 3801 aa3.39□□□□□ -1.87
RBBP4-202ENST00000373493 RYR2Q92736 4967 aa3.38□□□□□ -1.87
RBBP4-202ENST00000373493 LRP1BQ9NZR2 4599 aa3.37□□□□□ -1.87
RBBP4-202ENST00000373493 DNAH10Q8IVF4 4471 aa3.36□□□□□ -1.87
RBBP4-202ENST00000373493 PCLOQ9Y6V0 5065 aa3.36□□□□□ -1.87
RBBP4-202ENST00000373493 KMT2CQ8NEZ4 4911 aaKnown RBP3.34□□□□□ -1.87
RBBP4-202ENST00000373493 DNAH2Q9P225 4427 aa3.33□□□□□ -1.88
RBBP4-202ENST00000373493 INE1O15225 51 aa3.32□□□□□ -1.88
RBBP4-202ENST00000373493 DNAH11Q96DT5 4516 aa3.31□□□□□ -1.88
RBBP4-202ENST00000373493 HSPG2P98160 4391 aa3.29□□□□□ -1.88
RBBP4-202ENST00000373493 DNAH7Q8WXX0 4024 aa3.29□□□□□ -1.88
RBBP4-202ENST00000373493 PRKDCP78527 4128 aaKnown RBP3.28□□□□□ -1.89
RBBP4-202ENST00000373493 KRTAP15-1Q3LI76 137 aa3.27□□□□□ -1.89
RBBP4-202ENST00000373493 ALMS1Q8TCU4 4167 aa3.27□□□□□ -1.89
RBBP4-202ENST00000373493 KRTAP10-12P60413 245 aa3.25□□□□□ -1.89
RBBP4-202ENST00000373493 DNAH9Q9NYC9 4486 aa3.25□□□□□ -1.89
RBBP4-202ENST00000373493 DYNC2H1Q8NCM8 4307 aaKnown RBP3.25□□□□□ -1.89
RBBP4-202ENST00000373493 DYNC1H1Q14204 4646 aaKnown RBP3.23□□□□□ -1.89
RBBP4-202ENST00000373493 PLECQ15149 4684 aaKnown RBP3.23□□□□□ -1.89
RBBP4-202ENST00000373493 DNAH1Q9P2D7 4330 aa3.22□□□□□ -1.89
RBBP4-202ENST00000373493 FRAS1Q86XX4 4008 aa3.22□□□□□ -1.89
RBBP4-202ENST00000373493 LCE2BO14633 110 aa3.21□□□□□ -1.89
RBBP4-202ENST00000373493 KMT2AQ03164 3969 aa3.18□□□□□ -1.9
RBBP4-202ENST00000373493 DNHD1Q96M86 4753 aa3.17□□□□□ -1.9
RBBP4-202ENST00000373493 KRTAP12-3P60328 96 aa3.16□□□□□ -1.9
RBBP4-202ENST00000373493 DNAH6Q9C0G6 4158 aa3.16□□□□□ -1.9
RBBP4-202ENST00000373493 VPS13BQ7Z7G8 4022 aa3.15□□□□□ -1.9
RBBP4-202ENST00000373493 VPS13DQ5THJ4 4388 aa3.14□□□□□ -1.91
RBBP4-202ENST00000373493 DNAH8Q96JB1 4490 aa3.14□□□□□ -1.91
RBBP4-202ENST00000373493 SPRR2GQ9BYE4 73 aa3.14□□□□□ -1.91
RBBP4-202ENST00000373493 DNAH5Q8TE73 4624 aa3.13□□□□□ -1.91
RBBP4-202ENST00000373493 KRTAP4-5Q9BYR2 181 aa3.12□□□□□ -1.91
RBBP4-202ENST00000373493 LCE2CQ5TA81 110 aa3.1□□□□□ -1.91
RBBP4-202ENST00000373493 RYR3Q15413 4870 aa3.1□□□□□ -1.91
RBBP4-202ENST00000373493 STARD9Q9P2P6 4700 aa3.06□□□□□ -1.92
RBBP4-202ENST00000373493 HECTD4Q9Y4D8 3996 aa3.06□□□□□ -1.92
RBBP4-202ENST00000373493 DNAH17Q9UFH2 4485 aa3.06□□□□□ -1.92
RBBP4-202ENST00000373493 MT2AP02795 61 aa3.05□□□□□ -1.92
RBBP4-202ENST00000373493 MT1HP80294 61 aa3.05□□□□□ -1.92
RBBP4-202ENST00000373493 HERC2O95714 4834 aa3.04□□□□□ -1.92
RBBP4-202ENST00000373493 LORP23490 312 aaPredicted RBP3.04□□□□□ -1.92
RBBP4-202ENST00000373493 FAT1Q14517 4588 aa3.03□□□□□ -1.92
RBBP4-202ENST00000373493 PKD1P98161 4303 aa3.03□□□□□ -1.92
RBBP4-202ENST00000373493 FAT3Q8TDW7 4589 aa3.03□□□□□ -1.92
RBBP4-202ENST00000373493 SACSQ9NZJ4 4579 aa3.03□□□□□ -1.92
RBBP4-202ENST00000373493 KRTAP19-8Q3LI54 63 aa3.03□□□□□ -1.92
RBBP4-202ENST00000373493 KRTAP8-1Q8IUC2 63 aa3.02□□□□□ -1.93
RBBP4-202ENST00000373493 PKHD1P08F94 4074 aa3.02□□□□□ -1.93
RBBP4-202ENST00000373493 LCE3AQ5TA76 89 aa3.02□□□□□ -1.93
RBBP4-202ENST00000373493 LRP2P98164 4655 aa3.02□□□□□ -1.93
RBBP4-202ENST00000373493 FAT2Q9NYQ8 4349 aa3.01□□□□□ -1.93
RBBP4-202ENST00000373493 APOBP04114 4563 aaKnown RBP2.96□□□□□ -1.94
RBBP4-202ENST00000373493 KRTAP4-1Q9BYQ7 146 aa2.95□□□□□ -1.94
RBBP4-202ENST00000373493 KIAA1109Q2LD37 5005 aa2.92□□□□□ -1.94
RBBP4-202ENST00000373493 PKHD1L1Q86WI1 4243 aa2.91□□□□□ -1.94
RBBP4-202ENST00000373493 MT1FP04733 61 aa2.9□□□□□ -1.95
RBBP4-202ENST00000373493 HYDINQ4G0P3 5121 aa2.9□□□□□ -1.95
RBBP4-202ENST00000373493 ABCA13Q86UQ4 5058 aa2.88□□□□□ -1.95
RBBP4-202ENST00000373493 LRP1Q07954 4544 aaKnown RBP2.86□□□□□ -1.95
RBBP4-202ENST00000373493 KRTAP10-5P60370 271 aa2.84□□□□□ -1.95
RBBP4-202ENST00000373493 LCE3CQ5T5A8 94 aa2.8□□□□□ -1.96
RBBP4-202ENST00000373493 KRTAP19-1Q8IUB9 90 aa2.8□□□□□ -1.96
RBBP4-202ENST00000373493 KRTAP10-7P60409 375 aaPredicted RBP2.77□□□□□ -1.97
RBBP4-202ENST00000373493 SPRR5A0A1B0GTR4 108 aa2.76□□□□□ -1.97
RBBP4-202ENST00000373493 MT1BP07438 61 aa2.74□□□□□ -1.97
RBBP4-202ENST00000373493 CRCT1Q9UGL9 99 aa2.74□□□□□ -1.97
RBBP4-202ENST00000373493 KRTAP19-5Q3LI72 72 aa2.74□□□□□ -1.97
RBBP4-202ENST00000373493 UBR4Q5T4S7 5183 aa2.73□□□□□ -1.97
RBBP4-202ENST00000373493 LCE2AQ5TA79 106 aaPredicted RBP2.73□□□□□ -1.97
RBBP4-202ENST00000373493 MT1GP13640 62 aa2.72□□□□□ -1.97
RBBP4-202ENST00000373493 FLGP20930 4061 aaPredicted RBP2.72□□□□□ -1.97
RBBP4-202ENST00000373493 EPPK1P58107 5090 aaKnown RBP2.71□□□□□ -1.98
RBBP4-202ENST00000373493 MT1XP80297 61 aa2.7□□□□□ -1.98
RBBP4-202ENST00000373493 KRTAP17-1Q9BYP8 105 aa2.7□□□□□ -1.98
RBBP4-202ENST00000373493 KRTAP9-3Q9BYQ3 159 aa2.7□□□□□ -1.98
RBBP4-202ENST00000373493 KRTAP9-8Q9BYQ0 159 aa2.69□□□□□ -1.98
RBBP4-202ENST00000373493 TNXBP22105 4242 aa2.69□□□□□ -1.98
RBBP4-202ENST00000373493 LCE3BQ5TA77 95 aa2.69□□□□□ -1.98
RBBP4-202ENST00000373493 SPRR2FQ96RM1 72 aa2.67□□□□□ -1.98
RBBP4-202ENST00000373493 RNF213Q63HN8 5207 aa2.67□□□□□ -1.98
RBBP4-202ENST00000373493 FAT4Q6V0I7 4981 aa2.65□□□□□ -1.99
RBBP4-202ENST00000373493 KRTAP19-2Q3LHN2 52 aa2.63□□□□□ -1.99
RBBP4-202ENST00000373493 KRTAP19-6Q3LI70 58 aa2.6□□□□□ -1.99
RBBP4-202ENST00000373493 HMCN2Q8NDA2 5059 aa2.6□□□□□ -1.99
RBBP4-202ENST00000373493 MT1LQ93083 61 aa2.56□□□□□ -2
RBBP4-202ENST00000373493 SYNE1Q8NF91 8797 aaKnown RBP2.56□□□□□ -2
RBBP4-202ENST00000373493 KRTAP19-3Q7Z4W3 81 aa2.55□□□□□ -2
RBBP4-202ENST00000373493 SPRR2EP22531 72 aa2.55□□□□□ -2
RBBP4-202ENST00000373493 SPRR2BP35325 72 aa2.55□□□□□ -2
RBBP4-202ENST00000373493 SPRR2AP35326 72 aa2.55□□□□□ -2
RBBP4-202ENST00000373493 KRTAP12-4P60329 112 aa2.54□□□□□ -2
RBBP4-202ENST00000373493 MUC17Q685J3 4493 aa2.54□□□□□ -2
RBBP4-202ENST00000373493 MT1EP04732 61 aa2.54□□□□□ -2
RBBP4-202ENST00000373493 SPRR2DP22532 72 aa2.52□□□□□ -2.01
RBBP4-202ENST00000373493 LPAP08519 4548 aa2.49□□□□□ -2.01
RBBP4-202ENST00000373493 USH2AO75445 5202 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms