RNA–Protein interactions for RNA: ENST00000373433.8

RPRD1B-201, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1B, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-201ENST00000373433 FAT1Q14517 4588 aa5.93□□□□□ -1.46
RPRD1B-201ENST00000373433 S4R3F8 94 aa5.93□□□□□ -1.46
RPRD1B-201ENST00000373433 KRTAP4-5Q9BYR2 181 aa5.9□□□□□ -1.46
RPRD1B-201ENST00000373433 R4GN34 69 aa5.89□□□□□ -1.47
RPRD1B-201ENST00000373433 RYR2Q92736 4967 aa5.89□□□□□ -1.47
RPRD1B-201ENST00000373433 PKHD1P08F94 4074 aa5.87□□□□□ -1.47
RPRD1B-201ENST00000373433 KIAA1109Q2LD37 5005 aa5.87□□□□□ -1.47
RPRD1B-201ENST00000373433 RPL37P61927 97 aaKnown RBP5.86□□□□□ -1.47
RPRD1B-201ENST00000373433 C10orf95Q9H7T3 257 aa5.86□□□□□ -1.47
RPRD1B-201ENST00000373433 C20orf166-AS1Q96NR2 134 aa5.85□□□□□ -1.47
RPRD1B-201ENST00000373433 NDUFAF8A1L188 74 aa5.83□□□□□ -1.48
RPRD1B-201ENST00000373433 MT1HL1P0DM35 61 aa5.83□□□□□ -1.48
RPRD1B-201ENST00000373433 TPRXLQ17RH7 258 aa5.83□□□□□ -1.48
RPRD1B-201ENST00000373433 XP32Q5T750 250 aa5.83□□□□□ -1.48
RPRD1B-201ENST00000373433 VPS13BQ7Z7G8 4022 aa5.83□□□□□ -1.48
RPRD1B-201ENST00000373433 RYR3Q15413 4870 aa5.82□□□□□ -1.48
RPRD1B-201ENST00000373433 M0QZ58 72 aa5.82□□□□□ -1.48
RPRD1B-201ENST00000373433 FAT2Q9NYQ8 4349 aa5.82□□□□□ -1.48
RPRD1B-201ENST00000373433 KRTAP13-4Q3LI77 160 aa5.78□□□□□ -1.48
RPRD1B-201ENST00000373433 APOBP04114 4563 aaKnown RBP5.75□□□□□ -1.49
RPRD1B-201ENST00000373433 PKD1P98161 4303 aa5.75□□□□□ -1.49
RPRD1B-201ENST00000373433 KRTAP10-6P60371 365 aaPredicted RBP5.73□□□□□ -1.49
RPRD1B-201ENST00000373433 KRTAP17-1Q9BYP8 105 aa5.72□□□□□ -1.49
RPRD1B-201ENST00000373433 RYR1P21817 5038 aa5.7□□□□□ -1.5
RPRD1B-201ENST00000373433 KRTAP15-1Q3LI76 137 aa5.68□□□□□ -1.5
RPRD1B-201ENST00000373433 KRTAP3-3Q9BYR6 98 aa5.65□□□□□ -1.51
RPRD1B-201ENST00000373433 LRP1Q07954 4544 aaKnown RBP5.65□□□□□ -1.51
RPRD1B-201ENST00000373433 KRTAP3-2Q9BYR7 98 aa5.64□□□□□ -1.51
RPRD1B-201ENST00000373433 KRTAP12-2P59991 146 aa5.63□□□□□ -1.51
RPRD1B-201ENST00000373433 EPPK1P58107 5090 aaKnown RBP5.61□□□□□ -1.51
RPRD1B-201ENST00000373433 HSPG2P98160 4391 aa5.59□□□□□ -1.51
RPRD1B-201ENST00000373433 MYCBP2O75592 4640 aa5.58□□□□□ -1.52
RPRD1B-201ENST00000373433 KRTAP12-1P59990 96 aa5.53□□□□□ -1.52
RPRD1B-201ENST00000373433 HERC2O95714 4834 aa5.5□□□□□ -1.53
RPRD1B-201ENST00000373433 FAT3Q8TDW7 4589 aa5.5□□□□□ -1.53
RPRD1B-201ENST00000373433 PLAC4Q8WY50 150 aa5.49□□□□□ -1.53
RPRD1B-201ENST00000373433 BIRC6Q9NR09 4857 aa5.48□□□□□ -1.53
RPRD1B-201ENST00000373433 A0A0A0MQY5 61 aa5.44□□□□□ -1.54
RPRD1B-201ENST00000373433 PKHD1L1Q86WI1 4243 aa5.43□□□□□ -1.54
RPRD1B-201ENST00000373433 KRTAP10-10P60014 251 aa5.42□□□□□ -1.54
RPRD1B-201ENST00000373433 LUZP6Q538Z0 58 aa5.39□□□□□ -1.55
RPRD1B-201ENST00000373433 ABCA13Q86UQ4 5058 aa5.35□□□□□ -1.55
RPRD1B-201ENST00000373433 LRP2P98164 4655 aa5.29□□□□□ -1.56
RPRD1B-201ENST00000373433 TNXBP22105 4242 aa5.25□□□□□ -1.57
RPRD1B-201ENST00000373433 KRTAP4-1Q9BYQ7 146 aa5.25□□□□□ -1.57
RPRD1B-201ENST00000373433 LPAP08519 4548 aa5.22□□□□□ -1.57
RPRD1B-201ENST00000373433 TNP1P09430 55 aa5.18□□□□□ -1.58
RPRD1B-201ENST00000373433 HERC1Q15751 4861 aa5.13□□□□□ -1.59
RPRD1B-201ENST00000373433 LORP23490 312 aaPredicted RBP5.13□□□□□ -1.59
RPRD1B-201ENST00000373433 PCLOQ9Y6V0 5065 aa5.12□□□□□ -1.59
RPRD1B-201ENST00000373433 PP632Q6XCG6 107 aa5.06□□□□□ -1.6
RPRD1B-201ENST00000373433 MT1HP80294 61 aa4.95□□□□□ -1.62
RPRD1B-201ENST00000373433 FSIP2Q5CZC0 6907 aa4.94□□□□□ -1.62
RPRD1B-201ENST00000373433 MUC2Q02817 5179 aa4.93□□□□□ -1.62
RPRD1B-201ENST00000373433 HMCN2Q8NDA2 5059 aa4.92□□□□□ -1.62
RPRD1B-201ENST00000373433 RNF213Q63HN8 5207 aa4.9□□□□□ -1.62
RPRD1B-201ENST00000373433 UBR4Q5T4S7 5183 aa4.88□□□□□ -1.63
RPRD1B-201ENST00000373433 PRO2289Q9P1D8 64 aa4.88□□□□□ -1.63
RPRD1B-201ENST00000373433 LCE2CQ5TA81 110 aa4.84□□□□□ -1.63
RPRD1B-201ENST00000373433 KRTAP19-2Q3LHN2 52 aa4.82□□□□□ -1.64
RPRD1B-201ENST00000373433 MT2AP02795 61 aa4.78□□□□□ -1.64
RPRD1B-201ENST00000373433 MUC17Q685J3 4493 aa4.77□□□□□ -1.65
RPRD1B-201ENST00000373433 SPRR5A0A1B0GTR4 108 aa4.76□□□□□ -1.65
RPRD1B-201ENST00000373433 FAT4Q6V0I7 4981 aa4.75□□□□□ -1.65
RPRD1B-201ENST00000373433 MT1FP04733 61 aa4.75□□□□□ -1.65
RPRD1B-201ENST00000373433 KRTAP23-1A1A580 65 aa4.69□□□□□ -1.66
RPRD1B-201ENST00000373433 FLGP20930 4061 aaPredicted RBP4.67□□□□□ -1.66
RPRD1B-201ENST00000373433 CRCT1Q9UGL9 99 aa4.66□□□□□ -1.66
RPRD1B-201ENST00000373433 KRTAP9-8Q9BYQ0 159 aa4.66□□□□□ -1.66
RPRD1B-201ENST00000373433 OBSCNQ5VST9 7968 aa4.65□□□□□ -1.67
RPRD1B-201ENST00000373433 SPRR2GQ9BYE4 73 aa4.65□□□□□ -1.67
RPRD1B-201ENST00000373433 KRTAP19-1Q8IUB9 90 aa4.6□□□□□ -1.67
RPRD1B-201ENST00000373433 LCE3AQ5TA76 89 aa4.59□□□□□ -1.67
RPRD1B-201ENST00000373433 INE1O15225 51 aa4.52□□□□□ -1.69
RPRD1B-201ENST00000373433 KRTAP10-12P60413 245 aa4.52□□□□□ -1.69
RPRD1B-201ENST00000373433 LCE2AQ5TA79 106 aaPredicted RBP4.52□□□□□ -1.69
RPRD1B-201ENST00000373433 SYNE1Q8NF91 8797 aaKnown RBP4.51□□□□□ -1.69
RPRD1B-201ENST00000373433 KRTAP9-3Q9BYQ3 159 aa4.49□□□□□ -1.69
RPRD1B-201ENST00000373433 KRTAP19-8Q3LI54 63 aa4.46□□□□□ -1.7
RPRD1B-201ENST00000373433 MT1BP07438 61 aa4.42□□□□□ -1.7
RPRD1B-201ENST00000373433 KRTAP12-3P60328 96 aa4.39□□□□□ -1.71
RPRD1B-201ENST00000373433 LCE2BO14633 110 aa4.39□□□□□ -1.71
RPRD1B-201ENST00000373433 KRTAP8-1Q8IUC2 63 aa4.37□□□□□ -1.71
RPRD1B-201ENST00000373433 MT1XP80297 61 aa4.31□□□□□ -1.72
RPRD1B-201ENST00000373433 KRTAP10-5P60370 271 aa4.29□□□□□ -1.72
RPRD1B-201ENST00000373433 KRTAP10-7P60409 375 aaPredicted RBP4.23□□□□□ -1.73
RPRD1B-201ENST00000373433 DSTQ03001 7570 aaKnown RBP4.21□□□□□ -1.74
RPRD1B-201ENST00000373433 USH2AO75445 5202 aa4.19□□□□□ -1.74
RPRD1B-201ENST00000373433 SPRR2FQ96RM1 72 aa4.18□□□□□ -1.74
RPRD1B-201ENST00000373433 KRTAP9-2Q9BYQ4 174 aa4.16□□□□□ -1.74
RPRD1B-201ENST00000373433 KRTAP4-8A0A0G2JLE6 195 aa4.14□□□□□ -1.75
RPRD1B-201ENST00000373433 KRTAP4-8Q9BYQ9 185 aa4.14□□□□□ -1.75
RPRD1B-201ENST00000373433 LCE2DQ5TA82 110 aaPredicted RBP4.13□□□□□ -1.75
RPRD1B-201ENST00000373433 KRTAP19-5Q3LI72 72 aa4.11□□□□□ -1.75
RPRD1B-201ENST00000373433 KRTAP19-6Q3LI70 58 aa4.09□□□□□ -1.76
RPRD1B-201ENST00000373433 LCE3CQ5T5A8 94 aa4.07□□□□□ -1.76
RPRD1B-201ENST00000373433 FCGBPQ9Y6R7 5405 aaPredicted RBP4.05□□□□□ -1.76
RPRD1B-201ENST00000373433 KMT2DO14686 5537 aa4□□□□□ -1.77
RPRD1B-201ENST00000373433 SYNE2Q8WXH0 6885 aaKnown RBP3.97□□□□□ -1.77
RPRD1B-201ENST00000373433 KRTAP9-6A8MVA2 160 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms