RNA–Protein interactions for RNA: ENST00000373382.5

VPS26A-202, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene VPS26A, Length 3,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-202ENST00000373382 LRP1Q07954 4544 aaKnown RBP9.14□□□□□ -0.95
VPS26A-202ENST00000373382 KRTAP10-8P60410 259 aa9.11□□□□□ -0.95
VPS26A-202ENST00000373382 KRTAP3-3Q9BYR6 98 aa9.11□□□□□ -0.95
VPS26A-202ENST00000373382 KRTAP10-4P60372 401 aaPredicted RBP9.11□□□□□ -0.95
VPS26A-202ENST00000373382 P0C880 135 aa9.1□□□□□ -0.95
VPS26A-202ENST00000373382 S4R3F8 94 aa9.1□□□□□ -0.95
VPS26A-202ENST00000373382 APOBP04114 4563 aaKnown RBP9.08□□□□□ -0.96
VPS26A-202ENST00000373382 TPRXLQ17RH7 258 aa9.07□□□□□ -0.96
VPS26A-202ENST00000373382 HSPG2P98160 4391 aa9.05□□□□□ -0.96
VPS26A-202ENST00000373382 PKHD1L1Q86WI1 4243 aa9.04□□□□□ -0.96
VPS26A-202ENST00000373382 KRTAP3-2Q9BYR7 98 aa9.03□□□□□ -0.96
VPS26A-202ENST00000373382 A0A1B0GVY2 172 aa8.98□□□□□ -0.97
VPS26A-202ENST00000373382 FAT3Q8TDW7 4589 aa8.97□□□□□ -0.97
VPS26A-202ENST00000373382 XP32Q5T750 250 aa8.96□□□□□ -0.98
VPS26A-202ENST00000373382 KRTAP12-2P59991 146 aa8.95□□□□□ -0.98
VPS26A-202ENST00000373382 NDUFAF8A1L188 74 aa8.87□□□□□ -0.99
VPS26A-202ENST00000373382 Q5VSD8 79 aa8.87□□□□□ -0.99
VPS26A-202ENST00000373382 KMT2CQ8NEZ4 4911 aaKnown RBP8.82□□□□□ -1
VPS26A-202ENST00000373382 LPAP08519 4548 aa8.8□□□□□ -1
VPS26A-202ENST00000373382 A0A0A0MQY5 61 aa8.79□□□□□ -1
VPS26A-202ENST00000373382 KRTAP12-1P59990 96 aa8.79□□□□□ -1
VPS26A-202ENST00000373382 TNXBP22105 4242 aa8.79□□□□□ -1
VPS26A-202ENST00000373382 RYR2Q92736 4967 aa8.72□□□□□ -1.01
VPS26A-202ENST00000373382 LRP2P98164 4655 aa8.72□□□□□ -1.01
VPS26A-202ENST00000373382 KRTAP15-1Q3LI76 137 aa8.66□□□□□ -1.02
VPS26A-202ENST00000373382 M0QZ58 72 aa8.65□□□□□ -1.03
VPS26A-202ENST00000373382 KIAA1109Q2LD37 5005 aa8.6□□□□□ -1.03
VPS26A-202ENST00000373382 KRTAP17-1Q9BYP8 105 aa8.59□□□□□ -1.03
VPS26A-202ENST00000373382 R4GN34 69 aa8.58□□□□□ -1.04
VPS26A-202ENST00000373382 MT1HL1P0DM35 61 aa8.52□□□□□ -1.05
VPS26A-202ENST00000373382 RYR3Q15413 4870 aa8.51□□□□□ -1.05
VPS26A-202ENST00000373382 RYR1P21817 5038 aa8.49□□□□□ -1.05
VPS26A-202ENST00000373382 LORP23490 312 aaPredicted RBP8.39□□□□□ -1.07
VPS26A-202ENST00000373382 ABCA13Q86UQ4 5058 aa8.36□□□□□ -1.07
VPS26A-202ENST00000373382 KRTAP21-3Q3LHN1 58 aa8.31□□□□□ -1.08
VPS26A-202ENST00000373382 PLAC4Q8WY50 150 aa8.3□□□□□ -1.08
VPS26A-202ENST00000373382 CAMK2N1Q7Z7J9 78 aa8.26□□□□□ -1.09
VPS26A-202ENST00000373382 LUZP6Q538Z0 58 aa8.22□□□□□ -1.09
VPS26A-202ENST00000373382 KRTAP4-5Q9BYR2 181 aa8.16□□□□□ -1.1
VPS26A-202ENST00000373382 SEC61BP60468 96 aaKnown RBP8.16□□□□□ -1.1
VPS26A-202ENST00000373382 EPPK1P58107 5090 aaKnown RBP8.15□□□□□ -1.1
VPS26A-202ENST00000373382 KRTAP4-1Q9BYQ7 146 aa8.12□□□□□ -1.11
VPS26A-202ENST00000373382 MUC2Q02817 5179 aa8.09□□□□□ -1.11
VPS26A-202ENST00000373382 J3QL48 77 aa8.03□□□□□ -1.12
VPS26A-202ENST00000373382 MUC17Q685J3 4493 aa8.01□□□□□ -1.13
VPS26A-202ENST00000373382 PP632Q6XCG6 107 aa7.91□□□□□ -1.14
VPS26A-202ENST00000373382 TNP1P09430 55 aa7.82□□□□□ -1.16
VPS26A-202ENST00000373382 HERC2O95714 4834 aa7.79□□□□□ -1.16
VPS26A-202ENST00000373382 KRTAP19-2Q3LHN2 52 aa7.76□□□□□ -1.17
VPS26A-202ENST00000373382 FAT4Q6V0I7 4981 aa7.67□□□□□ -1.18
VPS26A-202ENST00000373382 PCLOQ9Y6V0 5065 aa7.65□□□□□ -1.18
VPS26A-202ENST00000373382 FLGP20930 4061 aaPredicted RBP7.62□□□□□ -1.19
VPS26A-202ENST00000373382 M0R2T5 61 aa7.56□□□□□ -1.2
VPS26A-202ENST00000373382 HERC1Q15751 4861 aa7.52□□□□□ -1.21
VPS26A-202ENST00000373382 BIRC6Q9NR09 4857 aa7.42□□□□□ -1.22
VPS26A-202ENST00000373382 LCE3AQ5TA76 89 aa7.39□□□□□ -1.23
VPS26A-202ENST00000373382 RNF213Q63HN8 5207 aa7.39□□□□□ -1.23
VPS26A-202ENST00000373382 SPRR5A0A1B0GTR4 108 aa7.37□□□□□ -1.23
VPS26A-202ENST00000373382 KRTAP23-1A1A580 65 aa7.37□□□□□ -1.23
VPS26A-202ENST00000373382 KRTAP19-1Q8IUB9 90 aa7.33□□□□□ -1.24
VPS26A-202ENST00000373382 KRTAP10-10P60014 251 aa7.31□□□□□ -1.24
VPS26A-202ENST00000373382 SPRR2GQ9BYE4 73 aa7.28□□□□□ -1.24
VPS26A-202ENST00000373382 LCE2CQ5TA81 110 aa7.26□□□□□ -1.25
VPS26A-202ENST00000373382 HMCN2Q8NDA2 5059 aa7.25□□□□□ -1.25
VPS26A-202ENST00000373382 UBR4Q5T4S7 5183 aa7.16□□□□□ -1.26
VPS26A-202ENST00000373382 MT1FP04733 61 aa7.15□□□□□ -1.26
VPS26A-202ENST00000373382 MT1HP80294 61 aa7.12□□□□□ -1.27
VPS26A-202ENST00000373382 MT2AP02795 61 aa7.1□□□□□ -1.27
VPS26A-202ENST00000373382 KRTAP12-3P60328 96 aa7□□□□□ -1.29
VPS26A-202ENST00000373382 KRTAP8-1Q8IUC2 63 aa7□□□□□ -1.29
VPS26A-202ENST00000373382 KRTAP10-12P60413 245 aa6.97□□□□□ -1.29
VPS26A-202ENST00000373382 PRO2289Q9P1D8 64 aa6.96□□□□□ -1.29
VPS26A-202ENST00000373382 KRTAP9-8Q9BYQ0 159 aa6.96□□□□□ -1.3
VPS26A-202ENST00000373382 KRTAP10-5P60370 271 aa6.94□□□□□ -1.3
VPS26A-202ENST00000373382 MT1XP80297 61 aa6.93□□□□□ -1.3
VPS26A-202ENST00000373382 MT1BP07438 61 aa6.9□□□□□ -1.31
VPS26A-202ENST00000373382 KRTAP10-7P60409 375 aaPredicted RBP6.89□□□□□ -1.31
VPS26A-202ENST00000373382 KRTAP19-8Q3LI54 63 aa6.85□□□□□ -1.31
VPS26A-202ENST00000373382 KMT2DO14686 5537 aa6.78□□□□□ -1.32
VPS26A-202ENST00000373382 INE1O15225 51 aa6.78□□□□□ -1.32
VPS26A-202ENST00000373382 USH2AO75445 5202 aa6.75□□□□□ -1.33
VPS26A-202ENST00000373382 KRTAP19-5Q3LI72 72 aa6.64□□□□□ -1.35
VPS26A-202ENST00000373382 KRTAP9-3Q9BYQ3 159 aa6.63□□□□□ -1.35
VPS26A-202ENST00000373382 LCE3CQ5T5A8 94 aa6.53□□□□□ -1.36
VPS26A-202ENST00000373382 KRTAP4-8A0A0G2JLE6 195 aa6.51□□□□□ -1.37
VPS26A-202ENST00000373382 KRTAP4-8Q9BYQ9 185 aa6.51□□□□□ -1.37
VPS26A-202ENST00000373382 LCE2BO14633 110 aa6.42□□□□□ -1.38
VPS26A-202ENST00000373382 KRTAP4-7Q9BYR0 210 aa6.4□□□□□ -1.38
VPS26A-202ENST00000373382 KRTAP9-6A8MVA2 160 aa6.38□□□□□ -1.39
VPS26A-202ENST00000373382 FSIP2Q5CZC0 6907 aa6.38□□□□□ -1.39
VPS26A-202ENST00000373382 KRTAP19-7Q3SYF9 63 aa6.16□□□□□ -1.42
VPS26A-202ENST00000373382 KRTAP2-3P0C7H8 128 aa6.06□□□□□ -1.44
VPS26A-202ENST00000373382 KRTAP2-4Q9BYR9 128 aa6.06□□□□□ -1.44
VPS26A-202ENST00000373382 KRTAP2-1Q9BYU5 128 aa6.06□□□□□ -1.44
VPS26A-202ENST00000373382 MT1LQ93083 61 aa6.01□□□□□ -1.45
VPS26A-202ENST00000373382 CRCT1Q9UGL9 99 aa5.99□□□□□ -1.45
VPS26A-202ENST00000373382 MT1EP04732 61 aa5.95□□□□□ -1.46
VPS26A-202ENST00000373382 LOC100996750A0A140TA64 210 aa5.94□□□□□ -1.46
VPS26A-202ENST00000373382 DSTQ03001 7570 aaKnown RBP5.93□□□□□ -1.46
VPS26A-202ENST00000373382 KRTAP4-3Q9BYR4 195 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms