RNA–Protein interactions for RNA: ENST00000373222.3

CHD6-202, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 2,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-202ENST00000373222 CHKB-CPT1BH3BT56 60 aa3.61□□□□□ -1.83
CHD6-202ENST00000373222 SMR3BP02814 79 aaPredicted RBP3.61□□□□□ -1.83
CHD6-202ENST00000373222 SSBP3-AS1Q7Z2R9 100 aa3.61□□□□□ -1.83
CHD6-202ENST00000373222 A8MUU9 505 aa3.6□□□□□ -1.83
CHD6-202ENST00000373222 LRP1Q07954 4544 aaKnown RBP3.59□□□□□ -1.83
CHD6-202ENST00000373222 KRTAP5-11Q6L8G4 156 aa3.58□□□□□ -1.84
CHD6-202ENST00000373222 PKHD1L1Q86WI1 4243 aa3.58□□□□□ -1.84
CHD6-202ENST00000373222 TYMSOSQ8TAI1 123 aa3.58□□□□□ -1.84
CHD6-202ENST00000373222 LOC101927531A0A1B0GV80 90 aa3.57□□□□□ -1.84
CHD6-202ENST00000373222 A6NN06 94 aa3.57□□□□□ -1.84
CHD6-202ENST00000373222 RYR2Q92736 4967 aa3.57□□□□□ -1.84
CHD6-202ENST00000373222 LIMD2Q9BT23 127 aa3.56□□□□□ -1.84
CHD6-202ENST00000373222 SPINK7P58062 85 aa3.56□□□□□ -1.84
CHD6-202ENST00000373222 IGKV2D-30A0A075B6S6 120 aa3.55□□□□□ -1.84
CHD6-202ENST00000373222 IGKV2-30P06310 120 aa3.55□□□□□ -1.84
CHD6-202ENST00000373222 MYCBP2O75592 4640 aa3.55□□□□□ -1.84
CHD6-202ENST00000373222 KRTAP21-3Q3LHN1 58 aa3.55□□□□□ -1.84
CHD6-202ENST00000373222 KRTAP15-1Q3LI76 137 aa3.55□□□□□ -1.84
CHD6-202ENST00000373222 SPTSSBQ8NFR3 76 aa3.55□□□□□ -1.84
CHD6-202ENST00000373222 FLG2Q5D862 2391 aaPredicted RBP3.54□□□□□ -1.84
CHD6-202ENST00000373222 KRTAP10-7P60409 375 aaPredicted RBP3.53□□□□□ -1.84
CHD6-202ENST00000373222 LINC01558Q9Y6Z2 57 aa3.53□□□□□ -1.84
CHD6-202ENST00000373222 HSPG2P98160 4391 aa3.52□□□□□ -1.85
CHD6-202ENST00000373222 RYR3Q15413 4870 aa3.52□□□□□ -1.85
CHD6-202ENST00000373222 NDUFAF8A1L188 74 aa3.51□□□□□ -1.85
CHD6-202ENST00000373222 C9orf92A6NGG3 77 aa3.51□□□□□ -1.85
CHD6-202ENST00000373222 DMAC1Q96GE9 116 aa3.51□□□□□ -1.85
CHD6-202ENST00000373222 DMBT1Q9UGM3 2413 aaPredicted RBP3.51□□□□□ -1.85
CHD6-202ENST00000373222 ATP11AUNQ6ZP68 121 aa3.51□□□□□ -1.85
CHD6-202ENST00000373222 ACYP2P14621 99 aa3.5□□□□□ -1.85
CHD6-202ENST00000373222 LINC00304Q8N9R0 145 aa3.5□□□□□ -1.85
CHD6-202ENST00000373222 KRTAP10-4P60372 401 aaPredicted RBP3.49□□□□□ -1.85
CHD6-202ENST00000373222 ROMO1P60602 79 aa3.49□□□□□ -1.85
CHD6-202ENST00000373222 TNXBP22105 4242 aa3.49□□□□□ -1.85
CHD6-202ENST00000373222 SPINK1P00995 79 aa3.48□□□□□ -1.85
CHD6-202ENST00000373222 CDC42SE1Q9NRR8 79 aa3.47□□□□□ -1.85
CHD6-202ENST00000373222 FAT3Q8TDW7 4589 aa3.47□□□□□ -1.85
CHD6-202ENST00000373222 A0A1B0GVY2 172 aa3.47□□□□□ -1.85
CHD6-202ENST00000373222 KIAA1109Q2LD37 5005 aa3.45□□□□□ -1.86
CHD6-202ENST00000373222 HMCN1Q96RW7 5635 aa3.44□□□□□ -1.86
CHD6-202ENST00000373222 A0A1B0GU69 56 aa3.43□□□□□ -1.86
CHD6-202ENST00000373222 LPAP08519 4548 aa3.43□□□□□ -1.86
CHD6-202ENST00000373222 C20orf166-AS1Q96NR2 134 aa3.4□□□□□ -1.87
CHD6-202ENST00000373222 EPPK1P58107 5090 aaKnown RBP3.4□□□□□ -1.87
CHD6-202ENST00000373222 RYR1P21817 5038 aa3.4□□□□□ -1.87
CHD6-202ENST00000373222 RPS29P62273 56 aaKnown RBP3.38□□□□□ -1.87
CHD6-202ENST00000373222 ABCA13Q86UQ4 5058 aa3.38□□□□□ -1.87
CHD6-202ENST00000373222 LRP2P98164 4655 aa3.37□□□□□ -1.87
CHD6-202ENST00000373222 P0C880 135 aa3.37□□□□□ -1.87
CHD6-202ENST00000373222 A0A1B0GU33 70 aa3.36□□□□□ -1.87
CHD6-202ENST00000373222 KRTAP5-9P26371 169 aa3.36□□□□□ -1.87
CHD6-202ENST00000373222 MIR22HGQ0VDD5 57 aa3.36□□□□□ -1.87
CHD6-202ENST00000373222 KRTAP25-1Q3LHN0 102 aa3.35□□□□□ -1.87
CHD6-202ENST00000373222 SPATA8Q6RVD6 105 aa3.35□□□□□ -1.87
CHD6-202ENST00000373222 UQCR11O14957 56 aa3.34□□□□□ -1.87
CHD6-202ENST00000373222 Q5VSD8 79 aa3.33□□□□□ -1.88
CHD6-202ENST00000373222 H0YAA0 97 aa3.32□□□□□ -1.88
CHD6-202ENST00000373222 KRTAP10-6P60371 365 aaPredicted RBP3.32□□□□□ -1.88
CHD6-202ENST00000373222 KRTAP10-8P60410 259 aa3.32□□□□□ -1.88
CHD6-202ENST00000373222 KRTAP5-4Q6L8H1 288 aa3.3□□□□□ -1.88
CHD6-202ENST00000373222 KRTAP5-1Q6L8H4 278 aa3.28□□□□□ -1.88
CHD6-202ENST00000373222 COX6B2Q6YFQ2 88 aa3.28□□□□□ -1.88
CHD6-202ENST00000373222 LCE1EQ5T753 118 aa3.27□□□□□ -1.89
CHD6-202ENST00000373222 MT1HL1P0DM35 61 aa3.26□□□□□ -1.89
CHD6-202ENST00000373222 RPL37P61927 97 aaKnown RBP3.24□□□□□ -1.89
CHD6-202ENST00000373222 H1FX-AS1Q4G0G2 97 aa3.24□□□□□ -1.89
CHD6-202ENST00000373222 CSAG1Q6PB30 78 aa3.24□□□□□ -1.89
CHD6-202ENST00000373222 R4GN34 69 aa3.24□□□□□ -1.89
CHD6-202ENST00000373222 KRTAP13-4Q3LI77 160 aa3.23□□□□□ -1.89
CHD6-202ENST00000373222 MUC2Q02817 5179 aa3.23□□□□□ -1.89
CHD6-202ENST00000373222 CRIPTQ9P021 101 aa3.22□□□□□ -1.89
CHD6-202ENST00000373222 KRTAP4-4Q9BYR3 166 aa3.2□□□□□ -1.9
CHD6-202ENST00000373222 A0A0D9SG42 100 aa3.19□□□□□ -1.9
CHD6-202ENST00000373222 S4R3F8 94 aa3.17□□□□□ -1.9
CHD6-202ENST00000373222 HERC2O95714 4834 aa3.16□□□□□ -1.9
CHD6-202ENST00000373222 SPINT4Q6UDR6 99 aa3.16□□□□□ -1.9
CHD6-202ENST00000373222 PRO2289Q9P1D8 64 aa3.15□□□□□ -1.9
CHD6-202ENST00000373222 MUC17Q685J3 4493 aa3.15□□□□□ -1.9
CHD6-202ENST00000373222 HERC1Q15751 4861 aa3.11□□□□□ -1.91
CHD6-202ENST00000373222 KRTAP12-2P59991 146 aa3.1□□□□□ -1.91
CHD6-202ENST00000373222 TPRXLQ17RH7 258 aa3.1□□□□□ -1.91
CHD6-202ENST00000373222 LCE1AQ5T7P2 110 aa3.09□□□□□ -1.91
CHD6-202ENST00000373222 KRTAP4-1Q9BYQ7 146 aa3.09□□□□□ -1.91
CHD6-202ENST00000373222 C10orf95Q9H7T3 257 aa3.08□□□□□ -1.92
CHD6-202ENST00000373222 PCLOQ9Y6V0 5065 aa3.07□□□□□ -1.92
CHD6-202ENST00000373222 BIRC6Q9NR09 4857 aa3.05□□□□□ -1.92
CHD6-202ENST00000373222 KRTAP12-1P59990 96 aa3.04□□□□□ -1.92
CHD6-202ENST00000373222 FAT4Q6V0I7 4981 aa3.04□□□□□ -1.92
CHD6-202ENST00000373222 RNF213Q63HN8 5207 aa3.02□□□□□ -1.93
CHD6-202ENST00000373222 M0QZ58 72 aa2.99□□□□□ -1.93
CHD6-202ENST00000373222 FLGP20930 4061 aaPredicted RBP2.99□□□□□ -1.93
CHD6-202ENST00000373222 KRTAP19-2Q3LHN2 52 aa2.98□□□□□ -1.93
CHD6-202ENST00000373222 KRTAP2-2Q9BYT5 123 aa2.97□□□□□ -1.93
CHD6-202ENST00000373222 HMCN2Q8NDA2 5059 aa2.96□□□□□ -1.94
CHD6-202ENST00000373222 UBR4Q5T4S7 5183 aa2.95□□□□□ -1.94
CHD6-202ENST00000373222 LCE1FQ5T754 118 aa2.82□□□□□ -1.96
CHD6-202ENST00000373222 KRTAP5-2Q701N4 177 aa2.81□□□□□ -1.96
CHD6-202ENST00000373222 INE1O15225 51 aa2.78□□□□□ -1.96
CHD6-202ENST00000373222 KRTAP4-3Q9BYR4 195 aa2.78□□□□□ -1.96
CHD6-202ENST00000373222 MT3P25713 68 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms