RNA–Protein interactions for RNA: ENST00000373104.5

CSF3R-204, Transcript of colony stimulating factor 3 receptor, humanhuman

TSL 1 (best) BASIC

Gene CSF3R, Length 2,953 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF3R-204ENST00000373104 KRTAP3-3Q9BYR6 98 aa6.43□□□□□ -1.38
CSF3R-204ENST00000373104 SACSQ9NZJ4 4579 aa6.42□□□□□ -1.38
CSF3R-204ENST00000373104 KRTAP3-2Q9BYR7 98 aa6.4□□□□□ -1.39
CSF3R-204ENST00000373104 S4R3F8 94 aa6.38□□□□□ -1.39
CSF3R-204ENST00000373104 DYNC1H1Q14204 4646 aaKnown RBP6.36□□□□□ -1.39
CSF3R-204ENST00000373104 KRTAP12-2P59991 146 aa6.36□□□□□ -1.39
CSF3R-204ENST00000373104 KRTAP10-8P60410 259 aa6.35□□□□□ -1.39
CSF3R-204ENST00000373104 KRTAP15-1Q3LI76 137 aa6.33□□□□□ -1.4
CSF3R-204ENST00000373104 MYCBP2O75592 4640 aa6.32□□□□□ -1.4
CSF3R-204ENST00000373104 PKHD1L1Q86WI1 4243 aa6.29□□□□□ -1.4
CSF3R-204ENST00000373104 HSPG2P98160 4391 aa6.26□□□□□ -1.41
CSF3R-204ENST00000373104 KRTAP10-4P60372 401 aaPredicted RBP6.26□□□□□ -1.41
CSF3R-204ENST00000373104 KRTAP12-1P59990 96 aa6.24□□□□□ -1.41
CSF3R-204ENST00000373104 LRP1Q07954 4544 aaKnown RBP6.24□□□□□ -1.41
CSF3R-204ENST00000373104 APOBP04114 4563 aaKnown RBP6.22□□□□□ -1.41
CSF3R-204ENST00000373104 XP32Q5T750 250 aa6.2□□□□□ -1.42
CSF3R-204ENST00000373104 FAT3Q8TDW7 4589 aa6.17□□□□□ -1.42
CSF3R-204ENST00000373104 A0A1B0GVY2 172 aa6.1□□□□□ -1.43
CSF3R-204ENST00000373104 LPAP08519 4548 aa6.1□□□□□ -1.43
CSF3R-204ENST00000373104 M0QZ58 72 aa6.09□□□□□ -1.43
CSF3R-204ENST00000373104 TNXBP22105 4242 aa6.06□□□□□ -1.44
CSF3R-204ENST00000373104 R4GN34 69 aa6.01□□□□□ -1.45
CSF3R-204ENST00000373104 Q5VSD8 79 aa6□□□□□ -1.45
CSF3R-204ENST00000373104 KMT2CQ8NEZ4 4911 aaKnown RBP5.99□□□□□ -1.45
CSF3R-204ENST00000373104 LRP2P98164 4655 aa5.99□□□□□ -1.45
CSF3R-204ENST00000373104 PLAC4Q8WY50 150 aa5.99□□□□□ -1.45
CSF3R-204ENST00000373104 KRTAP21-3Q3LHN1 58 aa5.93□□□□□ -1.46
CSF3R-204ENST00000373104 LUZP6Q538Z0 58 aa5.89□□□□□ -1.47
CSF3R-204ENST00000373104 A0A0A0MQY5 61 aa5.88□□□□□ -1.47
CSF3R-204ENST00000373104 LORP23490 312 aaPredicted RBP5.85□□□□□ -1.47
CSF3R-204ENST00000373104 RYR2Q92736 4967 aa5.84□□□□□ -1.47
CSF3R-204ENST00000373104 MT1HL1P0DM35 61 aa5.81□□□□□ -1.48
CSF3R-204ENST00000373104 KRTAP17-1Q9BYP8 105 aa5.79□□□□□ -1.48
CSF3R-204ENST00000373104 CAMK2N1Q7Z7J9 78 aa5.78□□□□□ -1.48
CSF3R-204ENST00000373104 RYR1P21817 5038 aa5.75□□□□□ -1.49
CSF3R-204ENST00000373104 KIAA1109Q2LD37 5005 aa5.74□□□□□ -1.49
CSF3R-204ENST00000373104 RYR3Q15413 4870 aa5.68□□□□□ -1.5
CSF3R-204ENST00000373104 PP632Q6XCG6 107 aa5.68□□□□□ -1.5
CSF3R-204ENST00000373104 ABCA13Q86UQ4 5058 aa5.65□□□□□ -1.5
CSF3R-204ENST00000373104 SEC61BP60468 96 aaKnown RBP5.59□□□□□ -1.51
CSF3R-204ENST00000373104 KRTAP4-1Q9BYQ7 146 aa5.56□□□□□ -1.52
CSF3R-204ENST00000373104 MUC17Q685J3 4493 aa5.52□□□□□ -1.53
CSF3R-204ENST00000373104 TNP1P09430 55 aa5.52□□□□□ -1.53
CSF3R-204ENST00000373104 MUC2Q02817 5179 aa5.49□□□□□ -1.53
CSF3R-204ENST00000373104 KRTAP4-5Q9BYR2 181 aa5.46□□□□□ -1.54
CSF3R-204ENST00000373104 EPPK1P58107 5090 aaKnown RBP5.4□□□□□ -1.54
CSF3R-204ENST00000373104 KRTAP19-2Q3LHN2 52 aa5.38□□□□□ -1.55
CSF3R-204ENST00000373104 J3QL48 77 aa5.36□□□□□ -1.55
CSF3R-204ENST00000373104 SPRR5A0A1B0GTR4 108 aa5.35□□□□□ -1.55
CSF3R-204ENST00000373104 KRTAP23-1A1A580 65 aa5.3□□□□□ -1.56
CSF3R-204ENST00000373104 FLGP20930 4061 aaPredicted RBP5.26□□□□□ -1.57
CSF3R-204ENST00000373104 PCLOQ9Y6V0 5065 aa5.24□□□□□ -1.57
CSF3R-204ENST00000373104 FAT4Q6V0I7 4981 aa5.2□□□□□ -1.58
CSF3R-204ENST00000373104 LCE3AQ5TA76 89 aa5.2□□□□□ -1.58
CSF3R-204ENST00000373104 HERC2O95714 4834 aa5.17□□□□□ -1.58
CSF3R-204ENST00000373104 PRO2289Q9P1D8 64 aa5.13□□□□□ -1.59
CSF3R-204ENST00000373104 M0R2T5 61 aa5.11□□□□□ -1.59
CSF3R-204ENST00000373104 KRTAP19-1Q8IUB9 90 aa5.08□□□□□ -1.6
CSF3R-204ENST00000373104 SPRR2GQ9BYE4 73 aa5.07□□□□□ -1.6
CSF3R-204ENST00000373104 HERC1Q15751 4861 aa5.07□□□□□ -1.6
CSF3R-204ENST00000373104 BIRC6Q9NR09 4857 aa5.01□□□□□ -1.61
CSF3R-204ENST00000373104 INE1O15225 51 aa5□□□□□ -1.61
CSF3R-204ENST00000373104 KRTAP10-10P60014 251 aa4.98□□□□□ -1.61
CSF3R-204ENST00000373104 LCE2CQ5TA81 110 aa4.96□□□□□ -1.61
CSF3R-204ENST00000373104 KRTAP8-1Q8IUC2 63 aa4.96□□□□□ -1.62
CSF3R-204ENST00000373104 HMCN2Q8NDA2 5059 aa4.95□□□□□ -1.62
CSF3R-204ENST00000373104 KRTAP12-3P60328 96 aa4.92□□□□□ -1.62
CSF3R-204ENST00000373104 MT1FP04733 61 aa4.9□□□□□ -1.63
CSF3R-204ENST00000373104 RNF213Q63HN8 5207 aa4.89□□□□□ -1.63
CSF3R-204ENST00000373104 KRTAP10-12P60413 245 aa4.86□□□□□ -1.63
CSF3R-204ENST00000373104 UBR4Q5T4S7 5183 aa4.86□□□□□ -1.63
CSF3R-204ENST00000373104 MT2AP02795 61 aa4.86□□□□□ -1.63
CSF3R-204ENST00000373104 MT1HP80294 61 aa4.85□□□□□ -1.63
CSF3R-204ENST00000373104 KRTAP10-5P60370 271 aa4.83□□□□□ -1.64
CSF3R-204ENST00000373104 MT1XP80297 61 aa4.81□□□□□ -1.64
CSF3R-204ENST00000373104 KRTAP10-7P60409 375 aaPredicted RBP4.78□□□□□ -1.64
CSF3R-204ENST00000373104 KRTAP9-8Q9BYQ0 159 aa4.77□□□□□ -1.65
CSF3R-204ENST00000373104 MT1BP07438 61 aa4.76□□□□□ -1.65
CSF3R-204ENST00000373104 KRTAP19-8Q3LI54 63 aa4.75□□□□□ -1.65
CSF3R-204ENST00000373104 KMT2DO14686 5537 aa4.64□□□□□ -1.67
CSF3R-204ENST00000373104 KRTAP19-5Q3LI72 72 aa4.62□□□□□ -1.67
CSF3R-204ENST00000373104 LCE3CQ5T5A8 94 aa4.61□□□□□ -1.67
CSF3R-204ENST00000373104 USH2AO75445 5202 aa4.55□□□□□ -1.68
CSF3R-204ENST00000373104 KRTAP9-3Q9BYQ3 159 aa4.53□□□□□ -1.68
CSF3R-204ENST00000373104 KRTAP9-6A8MVA2 160 aa4.51□□□□□ -1.69
CSF3R-204ENST00000373104 KRTAP4-8A0A0G2JLE6 195 aa4.47□□□□□ -1.69
CSF3R-204ENST00000373104 KRTAP4-8Q9BYQ9 185 aa4.47□□□□□ -1.69
CSF3R-204ENST00000373104 KRTAP4-7Q9BYR0 210 aa4.44□□□□□ -1.7
CSF3R-204ENST00000373104 LCE2BO14633 110 aa4.36□□□□□ -1.71
CSF3R-204ENST00000373104 KRTAP2-3P0C7H8 128 aa4.36□□□□□ -1.71
CSF3R-204ENST00000373104 KRTAP2-4Q9BYR9 128 aa4.36□□□□□ -1.71
CSF3R-204ENST00000373104 KRTAP2-1Q9BYU5 128 aa4.36□□□□□ -1.71
CSF3R-204ENST00000373104 KRTAP19-7Q3SYF9 63 aa4.28□□□□□ -1.72
CSF3R-204ENST00000373104 MT1LQ93083 61 aa4.18□□□□□ -1.74
CSF3R-204ENST00000373104 LOC100996750A0A140TA64 210 aa4.12□□□□□ -1.75
CSF3R-204ENST00000373104 MT1EP04732 61 aa4.12□□□□□ -1.75
CSF3R-204ENST00000373104 FSIP2Q5CZC0 6907 aa4.1□□□□□ -1.75
CSF3R-204ENST00000373104 CRCT1Q9UGL9 99 aa4.1□□□□□ -1.75
CSF3R-204ENST00000373104 KRTAP12-4P60329 112 aa4.08□□□□□ -1.76
CSF3R-204ENST00000373104 KRTAP4-3Q9BYR4 195 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms