RNA–Protein interactions for RNA: ENST00000370399.6

TGFBR3-202, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 4,550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-202ENST00000370399 KRTAP4-5Q9BYR2 181 aa3.69□□□□□ -1.82
TGFBR3-202ENST00000370399 M0QZ58 72 aa3.69□□□□□ -1.82
TGFBR3-202ENST00000370399 TPRXLQ17RH7 258 aa3.68□□□□□ -1.82
TGFBR3-202ENST00000370399 VPS13BQ7Z7G8 4022 aa3.66□□□□□ -1.82
TGFBR3-202ENST00000370399 MYCBP2O75592 4640 aa3.66□□□□□ -1.82
TGFBR3-202ENST00000370399 ALMS1Q8TCU4 4167 aa3.66□□□□□ -1.82
TGFBR3-202ENST00000370399 MT1HL1P0DM35 61 aa3.66□□□□□ -1.82
TGFBR3-202ENST00000370399 A6NN06 94 aa3.65□□□□□ -1.82
TGFBR3-202ENST00000370399 PKHD1P08F94 4074 aa3.65□□□□□ -1.83
TGFBR3-202ENST00000370399 RYR1P21817 5038 aa3.64□□□□□ -1.83
TGFBR3-202ENST00000370399 KRTAP3-1Q9BYR8 98 aa3.64□□□□□ -1.83
TGFBR3-202ENST00000370399 SACSQ9NZJ4 4579 aa3.64□□□□□ -1.83
TGFBR3-202ENST00000370399 HECTD4Q9Y4D8 3996 aa3.63□□□□□ -1.83
TGFBR3-202ENST00000370399 KMT2CQ8NEZ4 4911 aaKnown RBP3.62□□□□□ -1.83
TGFBR3-202ENST00000370399 RYR3Q15413 4870 aa3.62□□□□□ -1.83
TGFBR3-202ENST00000370399 LRP1Q07954 4544 aaKnown RBP3.61□□□□□ -1.83
TGFBR3-202ENST00000370399 P0C880 135 aa3.6□□□□□ -1.83
TGFBR3-202ENST00000370399 H0YAA0 97 aa3.6□□□□□ -1.83
TGFBR3-202ENST00000370399 APOBP04114 4563 aaKnown RBP3.59□□□□□ -1.83
TGFBR3-202ENST00000370399 FAT3Q8TDW7 4589 aa3.59□□□□□ -1.83
TGFBR3-202ENST00000370399 KRTAP25-1Q3LHN0 102 aa3.58□□□□□ -1.84
TGFBR3-202ENST00000370399 FAT2Q9NYQ8 4349 aa3.58□□□□□ -1.84
TGFBR3-202ENST00000370399 RYR2Q92736 4967 aa3.54□□□□□ -1.84
TGFBR3-202ENST00000370399 KRTAP17-1Q9BYP8 105 aa3.52□□□□□ -1.85
TGFBR3-202ENST00000370399 PLAC4Q8WY50 150 aa3.5□□□□□ -1.85
TGFBR3-202ENST00000370399 NDUFAF8A1L188 74 aa3.49□□□□□ -1.85
TGFBR3-202ENST00000370399 PKD1P98161 4303 aa3.46□□□□□ -1.86
TGFBR3-202ENST00000370399 C10orf95Q9H7T3 257 aa3.46□□□□□ -1.86
TGFBR3-202ENST00000370399 KRTAP10-6P60371 365 aaPredicted RBP3.45□□□□□ -1.86
TGFBR3-202ENST00000370399 KRTAP3-3Q9BYR6 98 aa3.45□□□□□ -1.86
TGFBR3-202ENST00000370399 KRTAP13-4Q3LI77 160 aa3.44□□□□□ -1.86
TGFBR3-202ENST00000370399 LRP2P98164 4655 aa3.42□□□□□ -1.86
TGFBR3-202ENST00000370399 HERC2O95714 4834 aa3.42□□□□□ -1.86
TGFBR3-202ENST00000370399 HSPG2P98160 4391 aa3.41□□□□□ -1.86
TGFBR3-202ENST00000370399 KRTAP12-2P59991 146 aa3.41□□□□□ -1.86
TGFBR3-202ENST00000370399 KRTAP10-10P60014 251 aa3.41□□□□□ -1.86
TGFBR3-202ENST00000370399 EPPK1P58107 5090 aaKnown RBP3.4□□□□□ -1.87
TGFBR3-202ENST00000370399 KRTAP3-2Q9BYR7 98 aa3.38□□□□□ -1.87
TGFBR3-202ENST00000370399 TNP1P09430 55 aa3.37□□□□□ -1.87
TGFBR3-202ENST00000370399 KRTAP12-1P59990 96 aa3.36□□□□□ -1.87
TGFBR3-202ENST00000370399 KRTAP4-1Q9BYQ7 146 aa3.35□□□□□ -1.87
TGFBR3-202ENST00000370399 LPAP08519 4548 aa3.31□□□□□ -1.88
TGFBR3-202ENST00000370399 PP632Q6XCG6 107 aa3.31□□□□□ -1.88
TGFBR3-202ENST00000370399 LORP23490 312 aaPredicted RBP3.29□□□□□ -1.88
TGFBR3-202ENST00000370399 ABCA13Q86UQ4 5058 aa3.27□□□□□ -1.89
TGFBR3-202ENST00000370399 PKHD1L1Q86WI1 4243 aa3.25□□□□□ -1.89
TGFBR3-202ENST00000370399 BIRC6Q9NR09 4857 aa3.24□□□□□ -1.89
TGFBR3-202ENST00000370399 TNXBP22105 4242 aa3.22□□□□□ -1.89
TGFBR3-202ENST00000370399 HERC1Q15751 4861 aa3.19□□□□□ -1.9
TGFBR3-202ENST00000370399 MUC2Q02817 5179 aa3.19□□□□□ -1.9
TGFBR3-202ENST00000370399 LCE2DQ5TA82 110 aaPredicted RBP3.18□□□□□ -1.9
TGFBR3-202ENST00000370399 PCLOQ9Y6V0 5065 aa3.16□□□□□ -1.9
TGFBR3-202ENST00000370399 RNF213Q63HN8 5207 aa3.15□□□□□ -1.91
TGFBR3-202ENST00000370399 PRO2289Q9P1D8 64 aa3.11□□□□□ -1.91
TGFBR3-202ENST00000370399 MT1HP80294 61 aa3.1□□□□□ -1.91
TGFBR3-202ENST00000370399 FAT4Q6V0I7 4981 aa3.08□□□□□ -1.92
TGFBR3-202ENST00000370399 UBR4Q5T4S7 5183 aa3.07□□□□□ -1.92
TGFBR3-202ENST00000370399 MT2AP02795 61 aa3.04□□□□□ -1.92
TGFBR3-202ENST00000370399 KRTAP23-1A1A580 65 aa3.04□□□□□ -1.92
TGFBR3-202ENST00000370399 MT1FP04733 61 aa3.03□□□□□ -1.92
TGFBR3-202ENST00000370399 KRTAP9-6A0A140TA67 174 aa2.99□□□□□ -1.93
TGFBR3-202ENST00000370399 LCE2CQ5TA81 110 aa2.99□□□□□ -1.93
TGFBR3-202ENST00000370399 HMCN2Q8NDA2 5059 aa2.98□□□□□ -1.93
TGFBR3-202ENST00000370399 KRTAP19-2Q3LHN2 52 aa2.97□□□□□ -1.93
TGFBR3-202ENST00000370399 FSIP2Q5CZC0 6907 aa2.97□□□□□ -1.93
TGFBR3-202ENST00000370399 SPRR2GQ9BYE4 73 aa2.97□□□□□ -1.93
TGFBR3-202ENST00000370399 MUC17Q685J3 4493 aa2.96□□□□□ -1.94
TGFBR3-202ENST00000370399 KRTAP10-12P60413 245 aa2.95□□□□□ -1.94
TGFBR3-202ENST00000370399 KRTAP19-1Q8IUB9 90 aa2.95□□□□□ -1.94
TGFBR3-202ENST00000370399 LCE3AQ5TA76 89 aa2.95□□□□□ -1.94
TGFBR3-202ENST00000370399 KRTAP15-1Q3LI76 137 aa2.93□□□□□ -1.94
TGFBR3-202ENST00000370399 FLGP20930 4061 aaPredicted RBP2.93□□□□□ -1.94
TGFBR3-202ENST00000370399 KRTAP9-8Q9BYQ0 159 aa2.91□□□□□ -1.94
TGFBR3-202ENST00000370399 KRTAP12-3P60328 96 aa2.88□□□□□ -1.95
TGFBR3-202ENST00000370399 LCE2BO14633 110 aa2.87□□□□□ -1.95
TGFBR3-202ENST00000370399 LCE2AQ5TA79 106 aaPredicted RBP2.83□□□□□ -1.96
TGFBR3-202ENST00000370399 MT1BP07438 61 aa2.82□□□□□ -1.96
TGFBR3-202ENST00000370399 KRTAP19-8Q3LI54 63 aa2.81□□□□□ -1.96
TGFBR3-202ENST00000370399 KRTAP9-3Q9BYQ3 159 aa2.8□□□□□ -1.96
TGFBR3-202ENST00000370399 INE1O15225 51 aa2.79□□□□□ -1.96
TGFBR3-202ENST00000370399 KRTAP10-7P60409 375 aaPredicted RBP2.79□□□□□ -1.96
TGFBR3-202ENST00000370399 MT1XP80297 61 aa2.78□□□□□ -1.96
TGFBR3-202ENST00000370399 KRTAP10-5P60370 271 aa2.76□□□□□ -1.97
TGFBR3-202ENST00000370399 USH2AO75445 5202 aa2.76□□□□□ -1.97
TGFBR3-202ENST00000370399 CRCT1Q9UGL9 99 aa2.75□□□□□ -1.97
TGFBR3-202ENST00000370399 KRTAP8-1Q8IUC2 63 aa2.73□□□□□ -1.97
TGFBR3-202ENST00000370399 KRTAP4-8A0A0G2JLE6 195 aa2.72□□□□□ -1.97
TGFBR3-202ENST00000370399 KRTAP19-5Q3LI72 72 aa2.72□□□□□ -1.97
TGFBR3-202ENST00000370399 KRTAP4-8Q9BYQ9 185 aa2.72□□□□□ -1.97
TGFBR3-202ENST00000370399 KRTAP9-2Q9BYQ4 174 aa2.63□□□□□ -1.99
TGFBR3-202ENST00000370399 GPR98Q8WXG9 6306 aa2.62□□□□□ -1.99
TGFBR3-202ENST00000370399 KMT2DO14686 5537 aa2.62□□□□□ -1.99
TGFBR3-202ENST00000370399 SPRR2FQ96RM1 72 aa2.61□□□□□ -1.99
TGFBR3-202ENST00000370399 LCE3CQ5T5A8 94 aa2.58□□□□□ -2
TGFBR3-202ENST00000370399 OBSCNQ5VST9 7968 aa2.58□□□□□ -2
TGFBR3-202ENST00000370399 KRTAP9-7A8MTY7 169 aa2.56□□□□□ -2
TGFBR3-202ENST00000370399 DSTQ03001 7570 aaKnown RBP2.56□□□□□ -2
TGFBR3-202ENST00000370399 SYNE1Q8NF91 8797 aaKnown RBP2.55□□□□□ -2
TGFBR3-202ENST00000370399 KRTAP4-7Q9BYR0 210 aa2.54□□□□□ -2
TGFBR3-202ENST00000370399 FCGBPQ9Y6R7 5405 aaPredicted RBP2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms