RNA–Protein interactions for RNA: ENST00000370138.1

LRRC39-203, Transcript of leucine rich repeat containing 39, humanhuman

TSL 5 BASIC

Gene LRRC39, Length 1,466 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39-203ENST00000370138 SPRR1BP22528 89 aa1.81□□□□□ -2.12
LRRC39-203ENST00000370138 APCP25054 2843 aa1.81□□□□□ -2.12
LRRC39-203ENST00000370138 HIVEP1P15822 2718 aa1.8□□□□□ -2.12
LRRC39-203ENST00000370138 CENPEQ02224 2701 aa1.8□□□□□ -2.12
LRRC39-203ENST00000370138 NIPBLQ6KC79 2804 aaeCLIP1.8□□□□□ -2.12
LRRC39-203ENST00000370138 FBN3Q75N90 2809 aa1.8□□□□□ -2.12
LRRC39-203ENST00000370138 DNAH1Q9P2D7 4330 aa1.8□□□□□ -2.12
LRRC39-203ENST00000370138 FASNP49327 2511 aaKnown RBP1.79□□□□□ -2.12
LRRC39-203ENST00000370138 APLNQ9ULZ1 77 aa1.79□□□□□ -2.12
LRRC39-203ENST00000370138 NF1P21359 2839 aa1.79□□□□□ -2.12
LRRC39-203ENST00000370138 J3QKU1 62 aa1.78□□□□□ -2.12
LRRC39-203ENST00000370138 PDZD2O15018 2839 aa1.78□□□□□ -2.12
LRRC39-203ENST00000370138 S4R3F8 94 aa1.77□□□□□ -2.13
LRRC39-203ENST00000370138 VWFP04275 2813 aa1.76□□□□□ -2.13
LRRC39-203ENST00000370138 Q5VSD8 79 aa1.76□□□□□ -2.13
LRRC39-203ENST00000370138 TENM3Q9P273 2699 aa1.76□□□□□ -2.13
LRRC39-203ENST00000370138 CSMD2Q7Z408 3487 aa1.76□□□□□ -2.13
LRRC39-203ENST00000370138 HECTD1Q9ULT8 2610 aa1.75□□□□□ -2.13
LRRC39-203ENST00000370138 SPINK1P00995 79 aa1.75□□□□□ -2.13
LRRC39-203ENST00000370138 DNAH3Q8TD57 4116 aa1.75□□□□□ -2.13
LRRC39-203ENST00000370138 ZNF469Q96JG9 3925 aaPredicted RBP1.75□□□□□ -2.13
LRRC39-203ENST00000370138 KRTAP13-1Q8IUC0 172 aa1.75□□□□□ -2.13
LRRC39-203ENST00000370138 F8P00451 2351 aa1.74□□□□□ -2.13
LRRC39-203ENST00000370138 TENM4Q6N022 2769 aa1.74□□□□□ -2.13
LRRC39-203ENST00000370138 TENM1Q9UKZ4 2725 aa1.74□□□□□ -2.13
LRRC39-203ENST00000370138 CUBNO60494 3623 aa1.74□□□□□ -2.13
LRRC39-203ENST00000370138 KRTAP13-4Q3LI77 160 aa1.74□□□□□ -2.13
LRRC39-203ENST00000370138 CMYA5Q8N3K9 4069 aa1.74□□□□□ -2.13
LRRC39-203ENST00000370138 ANK2Q01484 3957 aa1.73□□□□□ -2.13
LRRC39-203ENST00000370138 HUWE1Q7Z6Z7 4374 aaKnown RBP1.73□□□□□ -2.13
LRRC39-203ENST00000370138 NSD1Q96L73 2696 aaPredicted RBP1.73□□□□□ -2.13
LRRC39-203ENST00000370138 ATRQ13535 2644 aa1.73□□□□□ -2.13
LRRC39-203ENST00000370138 KRTAP21-2Q3LI59 83 aa1.73□□□□□ -2.13
LRRC39-203ENST00000370138 SPINK6Q6UWN8 80 aa1.72□□□□□ -2.13
LRRC39-203ENST00000370138 TENM2Q9NT68 2774 aa1.72□□□□□ -2.13
LRRC39-203ENST00000370138 DNAH10Q8IVF4 4471 aa1.72□□□□□ -2.13
LRRC39-203ENST00000370138 ITPR2Q14571 2701 aa1.71□□□□□ -2.13
LRRC39-203ENST00000370138 DYNC2H1Q8NCM8 4307 aaKnown RBP1.71□□□□□ -2.14
LRRC39-203ENST00000370138 DNAH17Q9UFH2 4485 aa1.71□□□□□ -2.14
LRRC39-203ENST00000370138 PKD1L1Q8TDX9 2849 aa1.71□□□□□ -2.14
LRRC39-203ENST00000370138 HELZ2Q9BYK8 2649 aaKnown RBP1.7□□□□□ -2.14
LRRC39-203ENST00000370138 OTOGQ6ZRI0 2925 aa1.7□□□□□ -2.14
LRRC39-203ENST00000370138 DNAH8Q96JB1 4490 aa1.69□□□□□ -2.14
LRRC39-203ENST00000370138 DNAH9Q9NYC9 4486 aa1.68□□□□□ -2.14
LRRC39-203ENST00000370138 TRRAPQ9Y4A5 3859 aa1.68□□□□□ -2.14
LRRC39-203ENST00000370138 VPS13DQ5THJ4 4388 aa1.68□□□□□ -2.14
LRRC39-203ENST00000370138 A0A0D9SG42 100 aa1.67□□□□□ -2.14
LRRC39-203ENST00000370138 NOTCH1P46531 2555 aa1.65□□□□□ -2.14
LRRC39-203ENST00000370138 STAB1Q9NY15 2570 aa1.65□□□□□ -2.14
LRRC39-203ENST00000370138 KRTAP12-1P59990 96 aa1.65□□□□□ -2.15
LRRC39-203ENST00000370138 SRRM2Q9UQ35 2752 aaKnown RBP1.65□□□□□ -2.15
LRRC39-203ENST00000370138 NBEAL1Q6ZS30 2694 aa1.65□□□□□ -2.15
LRRC39-203ENST00000370138 PLECQ15149 4684 aaKnown RBP1.65□□□□□ -2.15
LRRC39-203ENST00000370138 DNAH11Q96DT5 4516 aa1.64□□□□□ -2.15
LRRC39-203ENST00000370138 DNAH2Q9P225 4427 aa1.63□□□□□ -2.15
LRRC39-203ENST00000370138 DNAH6Q9C0G6 4158 aa1.63□□□□□ -2.15
LRRC39-203ENST00000370138 STAB2Q8WWQ8 2551 aa1.63□□□□□ -2.15
LRRC39-203ENST00000370138 PRKDCP78527 4128 aaKnown RBP1.62□□□□□ -2.15
LRRC39-203ENST00000370138 FBN1P35555 2871 aaKnown RBP1.62□□□□□ -2.15
LRRC39-203ENST00000370138 COL6A5A8TX70 2615 aa1.62□□□□□ -2.15
LRRC39-203ENST00000370138 M0QZ58 72 aa1.62□□□□□ -2.15
LRRC39-203ENST00000370138 HECTD4Q9Y4D8 3996 aa1.62□□□□□ -2.15
LRRC39-203ENST00000370138 LYSTQ99698 3801 aa1.61□□□□□ -2.15
LRRC39-203ENST00000370138 FRAS1Q86XX4 4008 aa1.61□□□□□ -2.15
LRRC39-203ENST00000370138 SACSQ9NZJ4 4579 aa1.61□□□□□ -2.15
LRRC39-203ENST00000370138 DNAH7Q8WXX0 4024 aa1.6□□□□□ -2.15
LRRC39-203ENST00000370138 STARD9Q9P2P6 4700 aa1.6□□□□□ -2.15
LRRC39-203ENST00000370138 CSMD3Q7Z407 3707 aa1.6□□□□□ -2.15
LRRC39-203ENST00000370138 DNAH5Q8TE73 4624 aa1.59□□□□□ -2.15
LRRC39-203ENST00000370138 MGAM2Q2M2H8 2515 aa1.58□□□□□ -2.16
LRRC39-203ENST00000370138 COL7A1Q02388 2944 aa1.57□□□□□ -2.16
LRRC39-203ENST00000370138 C9orf92A6NGG3 77 aa1.56□□□□□ -2.16
LRRC39-203ENST00000370138 TGP01266 2768 aa1.55□□□□□ -2.16
LRRC39-203ENST00000370138 RPS29P62273 56 aaKnown RBP1.54□□□□□ -2.16
LRRC39-203ENST00000370138 LRP1BQ9NZR2 4599 aa1.53□□□□□ -2.16
LRRC39-203ENST00000370138 MEGF8Q7Z7M0 2845 aa1.53□□□□□ -2.16
LRRC39-203ENST00000370138 PKHD1L1Q86WI1 4243 aa1.53□□□□□ -2.17
LRRC39-203ENST00000370138 PKD1P98161 4303 aa1.52□□□□□ -2.17
LRRC39-203ENST00000370138 DMBT1Q9UGM3 2413 aaPredicted RBP1.51□□□□□ -2.17
LRRC39-203ENST00000370138 PCLOQ9Y6V0 5065 aa1.51□□□□□ -2.17
LRRC39-203ENST00000370138 DYNC1H1Q14204 4646 aaKnown RBP1.51□□□□□ -2.17
LRRC39-203ENST00000370138 KMT2AQ03164 3969 aa1.51□□□□□ -2.17
LRRC39-203ENST00000370138 FAT2Q9NYQ8 4349 aa1.51□□□□□ -2.17
LRRC39-203ENST00000370138 APOBP04114 4563 aaKnown RBP1.51□□□□□ -2.17
LRRC39-203ENST00000370138 SMR3BP02814 79 aaPredicted RBP1.5□□□□□ -2.17
LRRC39-203ENST00000370138 KRTAP21-3Q3LHN1 58 aa1.5□□□□□ -2.17
LRRC39-203ENST00000370138 DNHD1Q96M86 4753 aa1.5□□□□□ -2.17
LRRC39-203ENST00000370138 UBR4Q5T4S7 5183 aa1.49□□□□□ -2.17
LRRC39-203ENST00000370138 KRTAP10-4P60372 401 aaPredicted RBP1.48□□□□□ -2.17
LRRC39-203ENST00000370138 HYDINQ4G0P3 5121 aa1.48□□□□□ -2.17
LRRC39-203ENST00000370138 FAT1Q14517 4588 aa1.47□□□□□ -2.17
LRRC39-203ENST00000370138 VPS13BQ7Z7G8 4022 aa1.47□□□□□ -2.17
LRRC39-203ENST00000370138 PKHD1P08F94 4074 aa1.47□□□□□ -2.17
LRRC39-203ENST00000370138 KRTAP12-4P60329 112 aa1.47□□□□□ -2.17
LRRC39-203ENST00000370138 KRTAP6-3Q3LI67 103 aa1.46□□□□□ -2.18
LRRC39-203ENST00000370138 FAT3Q8TDW7 4589 aa1.46□□□□□ -2.18
LRRC39-203ENST00000370138 TNXBP22105 4242 aa1.46□□□□□ -2.18
LRRC39-203ENST00000370138 TNP1P09430 55 aa1.45□□□□□ -2.18
LRRC39-203ENST00000370138 HSPG2P98160 4391 aa1.45□□□□□ -2.18
LRRC39-203ENST00000370138 LRP1Q07954 4544 aaKnown RBP1.45□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms