RNA–Protein interactions for RNA: ENST00000369144.7

EIF3A-201, Transcript of eukaryotic translation initiation factor 3 subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EIF3A, Length 6,646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3A-201ENST00000369144 KRTAP10-7P60409 375 aaPredicted RBP5.02□□□□□ -1.61
EIF3A-201ENST00000369144 KRTAP10-4P60372 401 aaPredicted RBP4.99□□□□□ -1.61
EIF3A-201ENST00000369144 CSMD3Q7Z407 3707 aa4.96□□□□□ -1.62
EIF3A-201ENST00000369144 ALMS1Q8TCU4 4167 aa4.94□□□□□ -1.62
EIF3A-201ENST00000369144 TRRAPQ9Y4A5 3859 aa4.94□□□□□ -1.62
EIF3A-201ENST00000369144 KRTAP19-5Q3LI72 72 aa4.93□□□□□ -1.62
EIF3A-201ENST00000369144 MT1HP80294 61 aa4.87□□□□□ -1.63
EIF3A-201ENST00000369144 KRTAP4-1Q9BYQ7 146 aa4.85□□□□□ -1.63
EIF3A-201ENST00000369144 VPS13CQ709C8 3753 aa4.81□□□□□ -1.64
EIF3A-201ENST00000369144 LCE3CQ5T5A8 94 aa4.81□□□□□ -1.64
EIF3A-201ENST00000369144 LCE3BQ5TA77 95 aa4.81□□□□□ -1.64
EIF3A-201ENST00000369144 ZNF469Q96JG9 3925 aaPredicted RBP4.8□□□□□ -1.64
EIF3A-201ENST00000369144 MT2AP02795 61 aa4.77□□□□□ -1.65
EIF3A-201ENST00000369144 DNHD1Q96M86 4753 aa4.76□□□□□ -1.65
EIF3A-201ENST00000369144 SPRR2EP22531 72 aa4.75□□□□□ -1.65
EIF3A-201ENST00000369144 SPRR2BP35325 72 aa4.75□□□□□ -1.65
EIF3A-201ENST00000369144 SPRR2AP35326 72 aa4.75□□□□□ -1.65
EIF3A-201ENST00000369144 AKAP9Q99996 3911 aa4.73□□□□□ -1.65
EIF3A-201ENST00000369144 MT1FP04733 61 aa4.69□□□□□ -1.66
EIF3A-201ENST00000369144 SPRR2GQ9BYE4 73 aa4.64□□□□□ -1.67
EIF3A-201ENST00000369144 DNAH2Q9P225 4427 aa4.63□□□□□ -1.67
EIF3A-201ENST00000369144 MT1GP13640 62 aa4.61□□□□□ -1.67
EIF3A-201ENST00000369144 SPRR2DP22532 72 aa4.58□□□□□ -1.68
EIF3A-201ENST00000369144 KRTAP12-4P60329 112 aa4.57□□□□□ -1.68
EIF3A-201ENST00000369144 DNAH1Q9P2D7 4330 aa4.55□□□□□ -1.68
EIF3A-201ENST00000369144 DNAH10Q8IVF4 4471 aa4.53□□□□□ -1.68
EIF3A-201ENST00000369144 DNAH8Q96JB1 4490 aa4.52□□□□□ -1.69
EIF3A-201ENST00000369144 DNAH9Q9NYC9 4486 aa4.5□□□□□ -1.69
EIF3A-201ENST00000369144 LCE2BO14633 110 aa4.48□□□□□ -1.69
EIF3A-201ENST00000369144 DNAH5Q8TE73 4624 aa4.46□□□□□ -1.69
EIF3A-201ENST00000369144 PLECQ15149 4684 aaKnown RBP4.44□□□□□ -1.7
EIF3A-201ENST00000369144 ANK2Q01484 3957 aa4.43□□□□□ -1.7
EIF3A-201ENST00000369144 DNAH17Q9UFH2 4485 aa4.4□□□□□ -1.7
EIF3A-201ENST00000369144 FAT1Q14517 4588 aa4.4□□□□□ -1.71
EIF3A-201ENST00000369144 KIAA1109Q2LD37 5005 aa4.39□□□□□ -1.71
EIF3A-201ENST00000369144 DNAH11Q96DT5 4516 aa4.38□□□□□ -1.71
EIF3A-201ENST00000369144 LCE3DQ9BYE3 92 aa4.37□□□□□ -1.71
EIF3A-201ENST00000369144 PRKDCP78527 4128 aaKnown RBP4.36□□□□□ -1.71
EIF3A-201ENST00000369144 KRTAP4-8A0A0G2JLE6 195 aa4.34□□□□□ -1.71
EIF3A-201ENST00000369144 KRTAP4-8Q9BYQ9 185 aa4.34□□□□□ -1.71
EIF3A-201ENST00000369144 DNAH3Q8TD57 4116 aa4.32□□□□□ -1.72
EIF3A-201ENST00000369144 FAT2Q9NYQ8 4349 aa4.32□□□□□ -1.72
EIF3A-201ENST00000369144 STARD9Q9P2P6 4700 aa4.32□□□□□ -1.72
EIF3A-201ENST00000369144 RYR2Q92736 4967 aa4.29□□□□□ -1.72
EIF3A-201ENST00000369144 FRAS1Q86XX4 4008 aa4.28□□□□□ -1.72
EIF3A-201ENST00000369144 VPS13DQ5THJ4 4388 aa4.27□□□□□ -1.73
EIF3A-201ENST00000369144 VPS13BQ7Z7G8 4022 aa4.27□□□□□ -1.73
EIF3A-201ENST00000369144 MT1XP80297 61 aa4.26□□□□□ -1.73
EIF3A-201ENST00000369144 LCE3EQ5T5B0 92 aa4.26□□□□□ -1.73
EIF3A-201ENST00000369144 LCE2CQ5TA81 110 aa4.26□□□□□ -1.73
EIF3A-201ENST00000369144 HYDINQ4G0P3 5121 aa4.26□□□□□ -1.73
EIF3A-201ENST00000369144 DYNC1H1Q14204 4646 aaKnown RBP4.24□□□□□ -1.73
EIF3A-201ENST00000369144 LCE2DQ5TA82 110 aaPredicted RBP4.22□□□□□ -1.73
EIF3A-201ENST00000369144 RYR3Q15413 4870 aa4.21□□□□□ -1.74
EIF3A-201ENST00000369144 RYR1P21817 5038 aa4.21□□□□□ -1.74
EIF3A-201ENST00000369144 KRTAP19-4Q3LI73 84 aa4.21□□□□□ -1.74
EIF3A-201ENST00000369144 MT4P47944 62 aa4.2□□□□□ -1.74
EIF3A-201ENST00000369144 LRP1BQ9NZR2 4599 aa4.2□□□□□ -1.74
EIF3A-201ENST00000369144 KRTAP19-1Q8IUB9 90 aa4.2□□□□□ -1.74
EIF3A-201ENST00000369144 KMT2CQ8NEZ4 4911 aaKnown RBP4.18□□□□□ -1.74
EIF3A-201ENST00000369144 KRTAP4-7Q9BYR0 210 aa4.18□□□□□ -1.74
EIF3A-201ENST00000369144 KRTAP19-8Q3LI54 63 aa4.16□□□□□ -1.74
EIF3A-201ENST00000369144 CMYA5Q8N3K9 4069 aa4.16□□□□□ -1.74
EIF3A-201ENST00000369144 DNAH7Q8WXX0 4024 aa4.15□□□□□ -1.74
EIF3A-201ENST00000369144 DYNC2H1Q8NCM8 4307 aaKnown RBP4.15□□□□□ -1.75
EIF3A-201ENST00000369144 SACSQ9NZJ4 4579 aa4.14□□□□□ -1.75
EIF3A-201ENST00000369144 DNAH6Q9C0G6 4158 aa4.14□□□□□ -1.75
EIF3A-201ENST00000369144 LCE1BQ5T7P3 118 aa4.14□□□□□ -1.75
EIF3A-201ENST00000369144 KMT2AQ03164 3969 aa4.14□□□□□ -1.75
EIF3A-201ENST00000369144 PRM1P04553 51 aa4.12□□□□□ -1.75
EIF3A-201ENST00000369144 BIRC6Q9NR09 4857 aa4.12□□□□□ -1.75
EIF3A-201ENST00000369144 APOBP04114 4563 aaKnown RBP4.11□□□□□ -1.75
EIF3A-201ENST00000369144 MT1BP07438 61 aa4.11□□□□□ -1.75
EIF3A-201ENST00000369144 SPRR5A0A1B0GTR4 108 aa4.1□□□□□ -1.75
EIF3A-201ENST00000369144 HERC2O95714 4834 aa4.06□□□□□ -1.76
EIF3A-201ENST00000369144 LCE1DQ5T752 114 aa4.06□□□□□ -1.76
EIF3A-201ENST00000369144 LYSTQ99698 3801 aa4.02□□□□□ -1.77
EIF3A-201ENST00000369144 EPPK1P58107 5090 aaKnown RBP4.01□□□□□ -1.77
EIF3A-201ENST00000369144 LOC100996750A0A140TA64 210 aa4.01□□□□□ -1.77
EIF3A-201ENST00000369144 KRTAP19-3Q7Z4W3 81 aa4□□□□□ -1.77
EIF3A-201ENST00000369144 KRTAP9-8Q9BYQ0 159 aa4□□□□□ -1.77
EIF3A-201ENST00000369144 LRP1Q07954 4544 aaKnown RBP4□□□□□ -1.77
EIF3A-201ENST00000369144 ABCA13Q86UQ4 5058 aa3.99□□□□□ -1.77
EIF3A-201ENST00000369144 FAT3Q8TDW7 4589 aa3.98□□□□□ -1.77
EIF3A-201ENST00000369144 HECTD4Q9Y4D8 3996 aa3.96□□□□□ -1.77
EIF3A-201ENST00000369144 KRTAP17-1Q9BYP8 105 aa3.94□□□□□ -1.78
EIF3A-201ENST00000369144 KRTAP9-3Q9BYQ3 159 aa3.93□□□□□ -1.78
EIF3A-201ENST00000369144 MT1LQ93083 61 aa3.93□□□□□ -1.78
EIF3A-201ENST00000369144 MT3P25713 68 aa3.91□□□□□ -1.78
EIF3A-201ENST00000369144 KRTAP4-3Q9BYR4 195 aa3.9□□□□□ -1.78
EIF3A-201ENST00000369144 MYCBP2O75592 4640 aa3.88□□□□□ -1.79
EIF3A-201ENST00000369144 LCE5AQ5TCM9 118 aa3.87□□□□□ -1.79
EIF3A-201ENST00000369144 MT1EP04732 61 aa3.86□□□□□ -1.79
EIF3A-201ENST00000369144 PCLOQ9Y6V0 5065 aa3.84□□□□□ -1.79
EIF3A-201ENST00000369144 PKHD1P08F94 4074 aa3.84□□□□□ -1.8
EIF3A-201ENST00000369144 LPAP08519 4548 aa3.83□□□□□ -1.8
EIF3A-201ENST00000369144 KRTAP4-9Q9BYQ8 210 aa3.82□□□□□ -1.8
EIF3A-201ENST00000369144 PKD1P98161 4303 aa3.81□□□□□ -1.8
EIF3A-201ENST00000369144 MT1MQ8N339 61 aa3.8□□□□□ -1.8
EIF3A-201ENST00000369144 HERC1Q15751 4861 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms