RNA–Protein interactions for RNA: ENST00000368527.7

TPM3-209, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-209ENST00000368527 A8MU10 97 aa5.49□□□□□ -1.53
TPM3-209ENST00000368527 XP32Q5T750 250 aa5.49□□□□□ -1.53
TPM3-209ENST00000368527 Q8N1X5 172 aa5.49□□□□□ -1.53
TPM3-209ENST00000368527 Q5VSD8 79 aa5.47□□□□□ -1.53
TPM3-209ENST00000368527 COX6B2Q6YFQ2 88 aa5.47□□□□□ -1.53
TPM3-209ENST00000368527 HSPG2P98160 4391 aa5.47□□□□□ -1.53
TPM3-209ENST00000368527 RPL37P61927 97 aaKnown RBP5.43□□□□□ -1.54
TPM3-209ENST00000368527 ABCA13Q86UQ4 5058 aa5.41□□□□□ -1.54
TPM3-209ENST00000368527 FLG2Q5D862 2391 aaPredicted RBP5.4□□□□□ -1.54
TPM3-209ENST00000368527 KRTAP3-1Q9BYR8 98 aa5.39□□□□□ -1.55
TPM3-209ENST00000368527 FAT1Q14517 4588 aa5.38□□□□□ -1.55
TPM3-209ENST00000368527 A0A1B0GU33 70 aa5.35□□□□□ -1.55
TPM3-209ENST00000368527 KRTAP4-5Q9BYR2 181 aa5.34□□□□□ -1.55
TPM3-209ENST00000368527 H1FX-AS1Q4G0G2 97 aa5.33□□□□□ -1.56
TPM3-209ENST00000368527 K7ERS5 55 aa5.3□□□□□ -1.56
TPM3-209ENST00000368527 TPRXLQ17RH7 258 aa5.3□□□□□ -1.56
TPM3-209ENST00000368527 HERC1Q15751 4861 aa5.29□□□□□ -1.56
TPM3-209ENST00000368527 MT1HL1P0DM35 61 aa5.29□□□□□ -1.56
TPM3-209ENST00000368527 FAT3Q8TDW7 4589 aa5.29□□□□□ -1.56
TPM3-209ENST00000368527 TNXBP22105 4242 aa5.28□□□□□ -1.56
TPM3-209ENST00000368527 KRTAP4-8Q9BYQ9 185 aa5.27□□□□□ -1.57
TPM3-209ENST00000368527 RBM12B-AS1Q9P1G2 102 aa5.27□□□□□ -1.57
TPM3-209ENST00000368527 S4R3F8 94 aa5.26□□□□□ -1.57
TPM3-209ENST00000368527 H0YAA0 97 aa5.25□□□□□ -1.57
TPM3-209ENST00000368527 MYCBP2O75592 4640 aa5.2□□□□□ -1.58
TPM3-209ENST00000368527 H3BS24 57 aa5.18□□□□□ -1.58
TPM3-209ENST00000368527 KRTAP9-2Q9BYQ4 174 aa5.18□□□□□ -1.58
TPM3-209ENST00000368527 DMBT1Q9UGM3 2413 aaPredicted RBP5.17□□□□□ -1.58
TPM3-209ENST00000368527 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.15□□□□□ -1.59
TPM3-209ENST00000368527 LRP1Q07954 4544 aaKnown RBP5.15□□□□□ -1.59
TPM3-209ENST00000368527 KRTAP10-6P60371 365 aaPredicted RBP5.14□□□□□ -1.59
TPM3-209ENST00000368527 CSAG1Q6PB30 78 aa5.14□□□□□ -1.59
TPM3-209ENST00000368527 KRTAP4-12Q9BQ66 201 aa5.14□□□□□ -1.59
TPM3-209ENST00000368527 KRTAP9-6A0A140TA67 174 aa5.13□□□□□ -1.59
TPM3-209ENST00000368527 SEC61BP60468 96 aaKnown RBP5.13□□□□□ -1.59
TPM3-209ENST00000368527 PRAC1Q96KF2 57 aa5.11□□□□□ -1.59
TPM3-209ENST00000368527 KRTAP19-1Q8IUB9 90 aa5.1□□□□□ -1.59
TPM3-209ENST00000368527 LINC01554Q52M75 96 aa5.09□□□□□ -1.59
TPM3-209ENST00000368527 M0QZ58 72 aa5.08□□□□□ -1.6
TPM3-209ENST00000368527 ADM2Q7Z4H4 148 aa5.08□□□□□ -1.6
TPM3-209ENST00000368527 ROMO1P60602 79 aa5.05□□□□□ -1.6
TPM3-209ENST00000368527 KRTAP25-1Q3LHN0 102 aa5.03□□□□□ -1.6
TPM3-209ENST00000368527 HMCN2Q8NDA2 5059 aa5.03□□□□□ -1.6
TPM3-209ENST00000368527 P0C880 135 aa5.01□□□□□ -1.61
TPM3-209ENST00000368527 KRTAP13-4Q3LI77 160 aa4.99□□□□□ -1.61
TPM3-209ENST00000368527 UBR4Q5T4S7 5183 aa4.98□□□□□ -1.61
TPM3-209ENST00000368527 LCE3BQ5TA77 95 aa4.98□□□□□ -1.61
TPM3-209ENST00000368527 A0A0D9SG42 100 aa4.97□□□□□ -1.61
TPM3-209ENST00000368527 KRTAP9-9Q9BYP9 154 aa4.92□□□□□ -1.62
TPM3-209ENST00000368527 KRTAP9-4Q9BYQ2 154 aa4.92□□□□□ -1.62
TPM3-209ENST00000368527 KRTAP12-1P59990 96 aa4.89□□□□□ -1.63
TPM3-209ENST00000368527 R4GN34 69 aa4.88□□□□□ -1.63
TPM3-209ENST00000368527 CRIPTQ9P021 101 aa4.87□□□□□ -1.63
TPM3-209ENST00000368527 KRTAP12-2P59991 146 aa4.86□□□□□ -1.63
TPM3-209ENST00000368527 SPINT4Q6UDR6 99 aa4.86□□□□□ -1.63
TPM3-209ENST00000368527 LRP2P98164 4655 aa4.85□□□□□ -1.63
TPM3-209ENST00000368527 KRTAP19-4Q3LI73 84 aa4.85□□□□□ -1.63
TPM3-209ENST00000368527 MUC17Q685J3 4493 aa4.81□□□□□ -1.64
TPM3-209ENST00000368527 KRTAP4-8A0A0G2JLE6 195 aa4.79□□□□□ -1.64
TPM3-209ENST00000368527 KRTAP4-1Q9BYQ7 146 aa4.78□□□□□ -1.64
TPM3-209ENST00000368527 RNF213Q63HN8 5207 aa4.78□□□□□ -1.64
TPM3-209ENST00000368527 KRTAP19-2Q3LHN2 52 aa4.77□□□□□ -1.65
TPM3-209ENST00000368527 LCE4AQ5TA78 99 aa4.76□□□□□ -1.65
TPM3-209ENST00000368527 A0A0A0MQY5 61 aa4.75□□□□□ -1.65
TPM3-209ENST00000368527 LPAP08519 4548 aa4.73□□□□□ -1.65
TPM3-209ENST00000368527 KRTAP9-7A8MTY7 169 aa4.7□□□□□ -1.66
TPM3-209ENST00000368527 LCE1DQ5T752 114 aa4.7□□□□□ -1.66
TPM3-209ENST00000368527 PP632Q6XCG6 107 aa4.64□□□□□ -1.67
TPM3-209ENST00000368527 C10orf95Q9H7T3 257 aa4.64□□□□□ -1.67
TPM3-209ENST00000368527 MUC2Q02817 5179 aa4.63□□□□□ -1.67
TPM3-209ENST00000368527 CAMK2N1Q7Z7J9 78 aa4.62□□□□□ -1.67
TPM3-209ENST00000368527 FLGP20930 4061 aaPredicted RBP4.61□□□□□ -1.67
TPM3-209ENST00000368527 KRTAP4-7Q9BYR0 210 aa4.61□□□□□ -1.67
TPM3-209ENST00000368527 KRTAP23-1A1A580 65 aa4.55□□□□□ -1.68
TPM3-209ENST00000368527 KRTAP4-9Q9BYQ8 210 aa4.55□□□□□ -1.68
TPM3-209ENST00000368527 KRTAP15-1Q3LI76 137 aa4.52□□□□□ -1.69
TPM3-209ENST00000368527 KRTAP9-3Q9BYQ3 159 aa4.52□□□□□ -1.69
TPM3-209ENST00000368527 FAT4Q6V0I7 4981 aa4.51□□□□□ -1.69
TPM3-209ENST00000368527 SPRR2GQ9BYE4 73 aa4.5□□□□□ -1.69
TPM3-209ENST00000368527 TNP1P09430 55 aa4.49□□□□□ -1.69
TPM3-209ENST00000368527 PLAC4Q8WY50 150 aa4.48□□□□□ -1.69
TPM3-209ENST00000368527 LCE5AQ5TCM9 118 aa4.47□□□□□ -1.69
TPM3-209ENST00000368527 M0R2T5 61 aa4.46□□□□□ -1.7
TPM3-209ENST00000368527 MT1HP80294 61 aa4.41□□□□□ -1.7
TPM3-209ENST00000368527 KRTAP4-11Q9BYQ6 195 aa4.41□□□□□ -1.7
TPM3-209ENST00000368527 KRTAP4-2Q9BYR5 136 aa4.41□□□□□ -1.7
TPM3-209ENST00000368527 KRTAP10-10P60014 251 aa4.35□□□□□ -1.71
TPM3-209ENST00000368527 MT2AP02795 61 aa4.33□□□□□ -1.72
TPM3-209ENST00000368527 KRTAP19-8Q3LI54 63 aa4.32□□□□□ -1.72
TPM3-209ENST00000368527 NDUFAF8A1L188 74 aa4.31□□□□□ -1.72
TPM3-209ENST00000368527 KRTAP9-8Q9BYQ0 159 aa4.3□□□□□ -1.72
TPM3-209ENST00000368527 MT1FP04733 61 aa4.28□□□□□ -1.72
TPM3-209ENST00000368527 LUZP6Q538Z0 58 aa4.28□□□□□ -1.72
TPM3-209ENST00000368527 FSIP2Q5CZC0 6907 aa4.19□□□□□ -1.74
TPM3-209ENST00000368527 PRO2289Q9P1D8 64 aa4.18□□□□□ -1.74
TPM3-209ENST00000368527 SPRR5A0A1B0GTR4 108 aa4.17□□□□□ -1.74
TPM3-209ENST00000368527 MT1BP07438 61 aa4.16□□□□□ -1.74
TPM3-209ENST00000368527 KRTAP8-1Q8IUC2 63 aa4.14□□□□□ -1.75
TPM3-209ENST00000368527 CRCT1Q9UGL9 99 aa4.13□□□□□ -1.75
TPM3-209ENST00000368527 LCE3AQ5TA76 89 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 130.6 ms