RNA–Protein interactions for RNA: ENST00000368299.7

LMNA-205, Transcript of lamin A/C, humanhuman

TSL 1 (best) BASIC

Gene LMNA, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-205ENST00000368299 RBM12B-AS1Q9P1G2 102 aa9.21□□□□□ -0.93
LMNA-205ENST00000368299 MIR22HGQ0VDD5 57 aa9.21□□□□□ -0.94
LMNA-205ENST00000368299 KRTAP3-1Q9BYR8 98 aa9.17□□□□□ -0.94
LMNA-205ENST00000368299 COX6B2Q6YFQ2 88 aa9.16□□□□□ -0.94
LMNA-205ENST00000368299 TPRXLQ17RH7 258 aa9.12□□□□□ -0.95
LMNA-205ENST00000368299 KRTAP4-5Q9BYR2 181 aa9.1□□□□□ -0.95
LMNA-205ENST00000368299 PRAC1Q96KF2 57 aa9□□□□□ -0.97
LMNA-205ENST00000368299 ADM2Q7Z4H4 148 aa8.98□□□□□ -0.97
LMNA-205ENST00000368299 J3QL48 77 aa8.92□□□□□ -0.98
LMNA-205ENST00000368299 H0YAA0 97 aa8.92□□□□□ -0.98
LMNA-205ENST00000368299 A0A1B0GU33 70 aa8.87□□□□□ -0.99
LMNA-205ENST00000368299 ABCA13Q86UQ4 5058 aa8.86□□□□□ -0.99
LMNA-205ENST00000368299 S4R3F8 94 aa8.85□□□□□ -0.99
LMNA-205ENST00000368299 H1FX-AS1Q4G0G2 97 aa8.84□□□□□ -0.99
LMNA-205ENST00000368299 LRP2P98164 4655 aa8.83□□□□□ -1
LMNA-205ENST00000368299 A0A0A0MQY5 61 aa8.83□□□□□ -1
LMNA-205ENST00000368299 BIRC6Q9NR09 4857 aa8.83□□□□□ -1
LMNA-205ENST00000368299 KRTAP3-3Q9BYR6 98 aa8.82□□□□□ -1
LMNA-205ENST00000368299 HERC2O95714 4834 aa8.8□□□□□ -1
LMNA-205ENST00000368299 SEC61BP60468 96 aaKnown RBP8.8□□□□□ -1
LMNA-205ENST00000368299 LINC01554Q52M75 96 aa8.77□□□□□ -1.01
LMNA-205ENST00000368299 LPAP08519 4548 aa8.76□□□□□ -1.01
LMNA-205ENST00000368299 CSAG1Q6PB30 78 aa8.76□□□□□ -1.01
LMNA-205ENST00000368299 KRTAP10-6P60371 365 aaPredicted RBP8.64□□□□□ -1.03
LMNA-205ENST00000368299 K7ERS5 55 aa8.61□□□□□ -1.03
LMNA-205ENST00000368299 KRTAP3-2Q9BYR7 98 aa8.6□□□□□ -1.03
LMNA-205ENST00000368299 KRTAP25-1Q3LHN0 102 aa8.55□□□□□ -1.04
LMNA-205ENST00000368299 KRTAP4-1Q9BYQ7 146 aa8.52□□□□□ -1.04
LMNA-205ENST00000368299 MUC17Q685J3 4493 aa8.5□□□□□ -1.05
LMNA-205ENST00000368299 PCLOQ9Y6V0 5065 aa8.5□□□□□ -1.05
LMNA-205ENST00000368299 P0C880 135 aa8.5□□□□□ -1.05
LMNA-205ENST00000368299 KRTAP13-4Q3LI77 160 aa8.49□□□□□ -1.05
LMNA-205ENST00000368299 ROMO1P60602 79 aa8.42□□□□□ -1.06
LMNA-205ENST00000368299 A0A0D9SG42 100 aa8.4□□□□□ -1.07
LMNA-205ENST00000368299 KRTAP19-2Q3LHN2 52 aa8.37□□□□□ -1.07
LMNA-205ENST00000368299 M0QZ58 72 aa8.36□□□□□ -1.07
LMNA-205ENST00000368299 CRIPTQ9P021 101 aa8.34□□□□□ -1.07
LMNA-205ENST00000368299 HMCN2Q8NDA2 5059 aa8.31□□□□□ -1.08
LMNA-205ENST00000368299 HERC1Q15751 4861 aa8.31□□□□□ -1.08
LMNA-205ENST00000368299 KRTAP12-2P59991 146 aa8.22□□□□□ -1.09
LMNA-205ENST00000368299 R4GN34 69 aa8.19□□□□□ -1.1
LMNA-205ENST00000368299 KRTAP12-1P59990 96 aa8.18□□□□□ -1.1
LMNA-205ENST00000368299 MUC2Q02817 5179 aa8.17□□□□□ -1.1
LMNA-205ENST00000368299 FLGP20930 4061 aaPredicted RBP8.14□□□□□ -1.11
LMNA-205ENST00000368299 SPINT4Q6UDR6 99 aa8.12□□□□□ -1.11
LMNA-205ENST00000368299 C10orf95Q9H7T3 257 aa8.07□□□□□ -1.12
LMNA-205ENST00000368299 LORP23490 312 aaPredicted RBP8.06□□□□□ -1.12
LMNA-205ENST00000368299 LCE2CQ5TA81 110 aa8.02□□□□□ -1.13
LMNA-205ENST00000368299 RNF213Q63HN8 5207 aa7.89□□□□□ -1.15
LMNA-205ENST00000368299 UBR4Q5T4S7 5183 aa7.88□□□□□ -1.15
LMNA-205ENST00000368299 M0R2T5 61 aa7.85□□□□□ -1.15
LMNA-205ENST00000368299 MT1HP80294 61 aa7.85□□□□□ -1.15
LMNA-205ENST00000368299 FAT4Q6V0I7 4981 aa7.8□□□□□ -1.16
LMNA-205ENST00000368299 KRTAP15-1Q3LI76 137 aa7.8□□□□□ -1.16
LMNA-205ENST00000368299 CAMK2N1Q7Z7J9 78 aa7.72□□□□□ -1.17
LMNA-205ENST00000368299 SPRR2GQ9BYE4 73 aa7.69□□□□□ -1.18
LMNA-205ENST00000368299 MT2AP02795 61 aa7.62□□□□□ -1.19
LMNA-205ENST00000368299 KRTAP19-1Q8IUB9 90 aa7.61□□□□□ -1.19
LMNA-205ENST00000368299 KRTAP9-8Q9BYQ0 159 aa7.61□□□□□ -1.19
LMNA-205ENST00000368299 KRTAP10-10P60014 251 aa7.61□□□□□ -1.19
LMNA-205ENST00000368299 MT1FP04733 61 aa7.59□□□□□ -1.19
LMNA-205ENST00000368299 NDUFAF8A1L188 74 aa7.57□□□□□ -1.2
LMNA-205ENST00000368299 PLAC4Q8WY50 150 aa7.54□□□□□ -1.2
LMNA-205ENST00000368299 PP632Q6XCG6 107 aa7.48□□□□□ -1.21
LMNA-205ENST00000368299 TNP1P09430 55 aa7.41□□□□□ -1.22
LMNA-205ENST00000368299 KRTAP19-8Q3LI54 63 aa7.41□□□□□ -1.22
LMNA-205ENST00000368299 LUZP6Q538Z0 58 aa7.41□□□□□ -1.22
LMNA-205ENST00000368299 KRTAP9-3Q9BYQ3 159 aa7.32□□□□□ -1.24
LMNA-205ENST00000368299 KRTAP23-1A1A580 65 aa7.32□□□□□ -1.24
LMNA-205ENST00000368299 MT1BP07438 61 aa7.27□□□□□ -1.24
LMNA-205ENST00000368299 LCE2AQ5TA79 106 aaPredicted RBP7.26□□□□□ -1.25
LMNA-205ENST00000368299 KRTAP10-5P60370 271 aa7.13□□□□□ -1.27
LMNA-205ENST00000368299 MT1XP80297 61 aa7.13□□□□□ -1.27
LMNA-205ENST00000368299 PRO2289Q9P1D8 64 aa7.05□□□□□ -1.28
LMNA-205ENST00000368299 LCE2BO14633 110 aa7.04□□□□□ -1.28
LMNA-205ENST00000368299 SPRR5A0A1B0GTR4 108 aa6.99□□□□□ -1.29
LMNA-205ENST00000368299 LCE3AQ5TA76 89 aa6.99□□□□□ -1.29
LMNA-205ENST00000368299 KRTAP10-12P60413 245 aa6.91□□□□□ -1.3
LMNA-205ENST00000368299 KRTAP8-1Q8IUC2 63 aa6.89□□□□□ -1.31
LMNA-205ENST00000368299 KRTAP10-7P60409 375 aaPredicted RBP6.86□□□□□ -1.31
LMNA-205ENST00000368299 USH2AO75445 5202 aa6.75□□□□□ -1.33
LMNA-205ENST00000368299 KRTAP12-3P60328 96 aa6.73□□□□□ -1.33
LMNA-205ENST00000368299 FSIP2Q5CZC0 6907 aa6.54□□□□□ -1.36
LMNA-205ENST00000368299 KRTAP19-6Q3LI70 58 aa6.53□□□□□ -1.36
LMNA-205ENST00000368299 KRTAP19-5Q3LI72 72 aa6.53□□□□□ -1.36
LMNA-205ENST00000368299 SSPOA2VEC9 5147 aa6.51□□□□□ -1.37
LMNA-205ENST00000368299 KRTAP4-8A0A0G2JLE6 195 aa6.49□□□□□ -1.37
LMNA-205ENST00000368299 KRTAP4-8Q9BYQ9 185 aa6.49□□□□□ -1.37
LMNA-205ENST00000368299 LCE2DQ5TA82 110 aaPredicted RBP6.45□□□□□ -1.38
LMNA-205ENST00000368299 KMT2DO14686 5537 aa6.41□□□□□ -1.38
LMNA-205ENST00000368299 KRTAP9-2Q9BYQ4 174 aa6.39□□□□□ -1.39
LMNA-205ENST00000368299 KRTAP19-7Q3SYF9 63 aa6.36□□□□□ -1.39
LMNA-205ENST00000368299 LCE3CQ5T5A8 94 aa6.3□□□□□ -1.4
LMNA-205ENST00000368299 KRTAP19-4Q3LI73 84 aa6.28□□□□□ -1.4
LMNA-205ENST00000368299 MT1EP04732 61 aa6.22□□□□□ -1.41
LMNA-205ENST00000368299 INE1O15225 51 aa6.16□□□□□ -1.42
LMNA-205ENST00000368299 MT1LQ93083 61 aa6.16□□□□□ -1.42
LMNA-205ENST00000368299 FCGBPQ9Y6R7 5405 aaPredicted RBP6.13□□□□□ -1.43
LMNA-205ENST00000368299 CRCT1Q9UGL9 99 aa6.08□□□□□ -1.44
LMNA-205ENST00000368299 KRTAP9-6A0A140TA67 174 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms