RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 MROH1Q8NDA8 1641 aa-1.31□□□□□ -2.62
RNU6-28P-201ENST00000362378 DUOX2Q9NRD8 1548 aa-1.31□□□□□ -2.62
RNU6-28P-201ENST00000362378 CENPEQ02224 2701 aa-1.32□□□□□ -2.62
RNU6-28P-201ENST00000362378 ASXL1Q8IXJ9 1541 aa-1.32□□□□□ -2.62
RNU6-28P-201ENST00000362378 SPENQ96T58 3664 aaKnown RBP-1.32□□□□□ -2.62
RNU6-28P-201ENST00000362378 TLN2Q9Y4G6 2542 aa-1.32□□□□□ -2.62
RNU6-28P-201ENST00000362378 FCER1GP30273 86 aa-1.33□□□□□ -2.62
RNU6-28P-201ENST00000362378 LY75O60449 1722 aa-1.33□□□□□ -2.62
RNU6-28P-201ENST00000362378 ADGRG4Q8IZF6 3080 aa-1.34□□□□□ -2.62
RNU6-28P-201ENST00000362378 SMG1Q96Q15 3661 aaKnown RBP-1.34□□□□□ -2.62
RNU6-28P-201ENST00000362378 CLASP1Q7Z460 1538 aa-1.34□□□□□ -2.62
RNU6-28P-201ENST00000362378 BOD1L1Q8NFC6 3051 aa-1.34□□□□□ -2.62
RNU6-28P-201ENST00000362378 TNP1P09430 55 aa-1.34□□□□□ -2.62
RNU6-28P-201ENST00000362378 DEFB1P60022 68 aa-1.34□□□□□ -2.62
RNU6-28P-201ENST00000362378 TLN1Q9Y490 2541 aaKnown RBP-1.35□□□□□ -2.63
RNU6-28P-201ENST00000362378 FRYQ5TBA9 3013 aa-1.35□□□□□ -2.63
RNU6-28P-201ENST00000362378 SMCO4Q9NRQ5 59 aa-1.36□□□□□ -2.63
RNU6-28P-201ENST00000362378 GNG13Q9P2W3 67 aa-1.36□□□□□ -2.63
RNU6-28P-201ENST00000362378 CSMD1Q96PZ7 3565 aa-1.36□□□□□ -2.63
RNU6-28P-201ENST00000362378 SMR3BP02814 79 aaPredicted RBP-1.37□□□□□ -2.63
RNU6-28P-201ENST00000362378 SFTA3P0C7M3 94 aa-1.37□□□□□ -2.63
RNU6-28P-201ENST00000362378 NOP10Q9NPE3 64 aaKnown RBP-1.37□□□□□ -2.63
RNU6-28P-201ENST00000362378 DYNC1H1Q14204 4646 aaKnown RBP-1.37□□□□□ -2.63
RNU6-28P-201ENST00000362378 DNAH5Q8TE73 4624 aa-1.38□□□□□ -2.63
RNU6-28P-201ENST00000362378 MADDQ8WXG6 1647 aa-1.39□□□□□ -2.63
RNU6-28P-201ENST00000362378 PDCD5O14737 125 aa-1.39□□□□□ -2.63
RNU6-28P-201ENST00000362378 MT1LQ93083 61 aa-1.39□□□□□ -2.63
RNU6-28P-201ENST00000362378 LRBAP50851 2863 aa-1.39□□□□□ -2.63
RNU6-28P-201ENST00000362378 MT1EP04732 61 aa-1.4□□□□□ -2.63
RNU6-28P-201ENST00000362378 CLPSL2Q6UWE3 100 aa-1.4□□□□□ -2.63
RNU6-28P-201ENST00000362378 SPTBN5Q9NRC6 3674 aaKnown RBP-1.4□□□□□ -2.63
RNU6-28P-201ENST00000362378 MGAQ8IWI9 3026 aa-1.41□□□□□ -2.63
RNU6-28P-201ENST00000362378 C5orf42Q9H799 3197 aa-1.41□□□□□ -2.64
RNU6-28P-201ENST00000362378 PRUNE2Q8WUY3 3088 aa-1.41□□□□□ -2.64
RNU6-28P-201ENST00000362378 FREM2Q5SZK8 3169 aa-1.42□□□□□ -2.64
RNU6-28P-201ENST00000362378 LOC400499M0QZD8 3231 aa-1.42□□□□□ -2.64
RNU6-28P-201ENST00000362378 K7EMI3 77 aa-1.44□□□□□ -2.64
RNU6-28P-201ENST00000362378 TIAM1Q13009 1591 aa-1.44□□□□□ -2.64
RNU6-28P-201ENST00000362378 CDC42BPAQ5VT25 1732 aa-1.44□□□□□ -2.64
RNU6-28P-201ENST00000362378 SPEGQ15772 3267 aa-1.44□□□□□ -2.64
RNU6-28P-201ENST00000362378 MAST1Q9Y2H9 1570 aa-1.45□□□□□ -2.64
RNU6-28P-201ENST00000362378 LINC01549A6NIU2 74 aa-1.45□□□□□ -2.64
RNU6-28P-201ENST00000362378 EP400Q96L91 3159 aa-1.47□□□□□ -2.64
RNU6-28P-201ENST00000362378 CROCC2H7BZ55 1655 aa-1.47□□□□□ -2.64
RNU6-28P-201ENST00000362378 ATMQ13315 3056 aa-1.47□□□□□ -2.65
RNU6-28P-201ENST00000362378 TRRAPQ9Y4A5 3859 aa-1.47□□□□□ -2.65
RNU6-28P-201ENST00000362378 DNAH17Q9UFH2 4485 aa-1.48□□□□□ -2.65
RNU6-28P-201ENST00000362378 UNC80Q8N2C7 3258 aa-1.49□□□□□ -2.65
RNU6-28P-201ENST00000362378 DCHS1Q96JQ0 3298 aa-1.5□□□□□ -2.65
RNU6-28P-201ENST00000362378 GLI2P10070 1586 aa-1.51□□□□□ -2.65
RNU6-28P-201ENST00000362378 RPS29P62273 56 aaKnown RBP-1.52□□□□□ -2.65
RNU6-28P-201ENST00000362378 ABCA6Q8N139 1617 aa-1.52□□□□□ -2.65
RNU6-28P-201ENST00000362378 SZT2Q5T011 3432 aa-1.53□□□□□ -2.65
RNU6-28P-201ENST00000362378 EFCAB5A4FU69 1503 aa-1.53□□□□□ -2.65
RNU6-28P-201ENST00000362378 M0QY20 66 aa-1.53□□□□□ -2.65
RNU6-28P-201ENST00000362378 M0R1W7 72 aa-1.55□□□□□ -2.66
RNU6-28P-201ENST00000362378 WDFY4Q6ZS81 3184 aa-1.55□□□□□ -2.66
RNU6-28P-201ENST00000362378 CEP350Q5VT06 3117 aa-1.55□□□□□ -2.66
RNU6-28P-201ENST00000362378 DMDP11532 3685 aa-1.55□□□□□ -2.66
RNU6-28P-201ENST00000362378 DNAH10Q8IVF4 4471 aa-1.56□□□□□ -2.66
RNU6-28P-201ENST00000362378 M0QZ58 72 aa-1.56□□□□□ -2.66
RNU6-28P-201ENST00000362378 VCANP13611 3396 aa-1.57□□□□□ -2.66
RNU6-28P-201ENST00000362378 MUC3AQ02505 3323 aa-1.58□□□□□ -2.66
RNU6-28P-201ENST00000362378 SERF2P84101 59 aa-1.58□□□□□ -2.66
RNU6-28P-201ENST00000362378 A0A1B0GUL6 1792 aa-1.58□□□□□ -2.66
RNU6-28P-201ENST00000362378 SPTAN1Q13813 2472 aaKnown RBP-1.58□□□□□ -2.66
RNU6-28P-201ENST00000362378 A8MTW9 85 aa-1.59□□□□□ -2.66
RNU6-28P-201ENST00000362378 CRYBG3Q68DQ2 2970 aa-1.59□□□□□ -2.66
RNU6-28P-201ENST00000362378 ALS2Q96Q42 1657 aa-1.6□□□□□ -2.67
RNU6-28P-201ENST00000362378 DEFB4AO15263 64 aa-1.6□□□□□ -2.67
RNU6-28P-201ENST00000362378 TMEM167BQ9NRX6 74 aa-1.6□□□□□ -2.67
RNU6-28P-201ENST00000362378 NMES1Q9C002 83 aa-1.61□□□□□ -2.67
RNU6-28P-201ENST00000362378 ABRACLQ9P1F3 81 aa-1.61□□□□□ -2.67
RNU6-28P-201ENST00000362378 EEA1Q15075 1411 aa-1.61□□□□□ -2.67
RNU6-28P-201ENST00000362378 LINC00308Q8TCZ7 52 aa-1.62□□□□□ -2.67
RNU6-28P-201ENST00000362378 CCDC180Q9P1Z9 1646 aa-1.62□□□□□ -2.67
RNU6-28P-201ENST00000362378 IGIPA6NJ69 53 aa-1.63□□□□□ -2.67
RNU6-28P-201ENST00000362378 KAAG1Q9UBP8 84 aa-1.63□□□□□ -2.67
RNU6-28P-201ENST00000362378 USP34Q70CQ2 3546 aa-1.63□□□□□ -2.67
RNU6-28P-201ENST00000362378 FAM208AQ9UK61 1670 aaKnown RBP-1.64□□□□□ -2.67
RNU6-28P-201ENST00000362378 MKI67P46013 3256 aaKnown RBP-1.64□□□□□ -2.67
RNU6-28P-201ENST00000362378 WDFY3Q8IZQ1 3526 aa-1.65□□□□□ -2.67
RNU6-28P-201ENST00000362378 A0A087WWC5 75 aa-1.66□□□□□ -2.68
RNU6-28P-201ENST00000362378 CFAP54Q96N23 3096 aa-1.68□□□□□ -2.68
RNU6-28P-201ENST00000362378 VPS13CQ709C8 3753 aa-1.68□□□□□ -2.68
RNU6-28P-201ENST00000362378 PREX2Q70Z35 1606 aa-1.69□□□□□ -2.68
RNU6-28P-201ENST00000362378 SMIM27A0A1W2PRY6 76 aa-1.69□□□□□ -2.68
RNU6-28P-201ENST00000362378 KRTAP19-2Q3LHN2 52 aa-1.69□□□□□ -2.68
RNU6-28P-201ENST00000362378 LINC01546A6NGU7 62 aa-1.71□□□□□ -2.68
RNU6-28P-201ENST00000362378 KIF21BO75037 1637 aa-1.71□□□□□ -2.68
RNU6-28P-201ENST00000362378 EFCAB6Q5THR3 1501 aa-1.72□□□□□ -2.69
RNU6-28P-201ENST00000362378 ABCA10Q8WWZ4 1543 aa-1.72□□□□□ -2.69
RNU6-28P-201ENST00000362378 DNAH14Q0VDD8 3507 aa-1.73□□□□□ -2.69
RNU6-28P-201ENST00000362378 DNAH12Q6ZR08 3092 aa-1.73□□□□□ -2.69
RNU6-28P-201ENST00000362378 FRYLO94915 3013 aa-1.74□□□□□ -2.69
RNU6-28P-201ENST00000362378 UGGT1Q9NYU2 1555 aa-1.75□□□□□ -2.69
RNU6-28P-201ENST00000362378 WFDC10BQ8IUB3 73 aa-1.75□□□□□ -2.69
RNU6-28P-201ENST00000362378 H0YGX0 51 aa-1.76□□□□□ -2.69
RNU6-28P-201ENST00000362378 PCNTO95613 3336 aa-1.77□□□□□ -2.69
RNU6-28P-201ENST00000362378 CDH23Q9H251 3354 aa-1.78□□□□□ -2.69
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms