RNA–Protein interactions for RNA: ENST00000361034.7

GRAMD4-201, Transcript of GRAM domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GRAMD4, Length 4,315 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD4-201ENST00000361034 DNAH1Q9P2D7 4330 aa6.4□□□□□ -1.38
GRAMD4-201ENST00000361034 KRTAP10-6P60371 365 aaPredicted RBP6.37□□□□□ -1.39
GRAMD4-201ENST00000361034 DNAH6Q9C0G6 4158 aa6.33□□□□□ -1.4
GRAMD4-201ENST00000361034 VPS13DQ5THJ4 4388 aa6.33□□□□□ -1.4
GRAMD4-201ENST00000361034 DNAH11Q96DT5 4516 aa6.31□□□□□ -1.4
GRAMD4-201ENST00000361034 DNAH2Q9P225 4427 aa6.31□□□□□ -1.4
GRAMD4-201ENST00000361034 HYDINQ4G0P3 5121 aa6.28□□□□□ -1.4
GRAMD4-201ENST00000361034 KRTAP10-4P60372 401 aaPredicted RBP6.26□□□□□ -1.41
GRAMD4-201ENST00000361034 DNAH8Q96JB1 4490 aa6.23□□□□□ -1.41
GRAMD4-201ENST00000361034 DNAH17Q9UFH2 4485 aa6.22□□□□□ -1.41
GRAMD4-201ENST00000361034 HECTD4Q9Y4D8 3996 aa6.21□□□□□ -1.42
GRAMD4-201ENST00000361034 MT1HL1P0DM35 61 aa6.2□□□□□ -1.42
GRAMD4-201ENST00000361034 KRTAP10-10P60014 251 aa6.18□□□□□ -1.42
GRAMD4-201ENST00000361034 KRTAP3-2Q9BYR7 98 aa6.16□□□□□ -1.42
GRAMD4-201ENST00000361034 PKHD1P08F94 4074 aa6.15□□□□□ -1.42
GRAMD4-201ENST00000361034 LRP1BQ9NZR2 4599 aa6.15□□□□□ -1.42
GRAMD4-201ENST00000361034 KRTAP15-1Q3LI76 137 aa6.14□□□□□ -1.43
GRAMD4-201ENST00000361034 KRTAP3-3Q9BYR6 98 aa6.14□□□□□ -1.43
GRAMD4-201ENST00000361034 FAT1Q14517 4588 aa6.11□□□□□ -1.43
GRAMD4-201ENST00000361034 DNAH5Q8TE73 4624 aa6.1□□□□□ -1.43
GRAMD4-201ENST00000361034 FAT2Q9NYQ8 4349 aa6.09□□□□□ -1.43
GRAMD4-201ENST00000361034 DYNC2H1Q8NCM8 4307 aaKnown RBP6.08□□□□□ -1.44
GRAMD4-201ENST00000361034 ALMS1Q8TCU4 4167 aa6.04□□□□□ -1.44
GRAMD4-201ENST00000361034 VPS13BQ7Z7G8 4022 aa6.04□□□□□ -1.44
GRAMD4-201ENST00000361034 KRTAP4-5Q9BYR2 181 aa6.03□□□□□ -1.44
GRAMD4-201ENST00000361034 KMT2CQ8NEZ4 4911 aaKnown RBP6.02□□□□□ -1.45
GRAMD4-201ENST00000361034 MYCBP2O75592 4640 aa5.95□□□□□ -1.46
GRAMD4-201ENST00000361034 SACSQ9NZJ4 4579 aa5.94□□□□□ -1.46
GRAMD4-201ENST00000361034 DYNC1H1Q14204 4646 aaKnown RBP5.91□□□□□ -1.46
GRAMD4-201ENST00000361034 KIAA1109Q2LD37 5005 aa5.89□□□□□ -1.47
GRAMD4-201ENST00000361034 LRP1Q07954 4544 aaKnown RBP5.88□□□□□ -1.47
GRAMD4-201ENST00000361034 PKD1P98161 4303 aa5.87□□□□□ -1.47
GRAMD4-201ENST00000361034 PRO2289Q9P1D8 64 aa5.87□□□□□ -1.47
GRAMD4-201ENST00000361034 RYR1P21817 5038 aa5.84□□□□□ -1.48
GRAMD4-201ENST00000361034 FAT3Q8TDW7 4589 aa5.83□□□□□ -1.48
GRAMD4-201ENST00000361034 APOBP04114 4563 aaKnown RBP5.81□□□□□ -1.48
GRAMD4-201ENST00000361034 LORP23490 312 aaPredicted RBP5.8□□□□□ -1.48
GRAMD4-201ENST00000361034 RYR3Q15413 4870 aa5.76□□□□□ -1.49
GRAMD4-201ENST00000361034 RYR2Q92736 4967 aa5.71□□□□□ -1.49
GRAMD4-201ENST00000361034 EPPK1P58107 5090 aaKnown RBP5.63□□□□□ -1.51
GRAMD4-201ENST00000361034 KRTAP17-1Q9BYP8 105 aa5.58□□□□□ -1.52
GRAMD4-201ENST00000361034 KRTAP4-1Q9BYQ7 146 aa5.57□□□□□ -1.52
GRAMD4-201ENST00000361034 HSPG2P98160 4391 aa5.57□□□□□ -1.52
GRAMD4-201ENST00000361034 INE1O15225 51 aa5.57□□□□□ -1.52
GRAMD4-201ENST00000361034 PKHD1L1Q86WI1 4243 aa5.55□□□□□ -1.52
GRAMD4-201ENST00000361034 LCE3AQ5TA76 89 aa5.54□□□□□ -1.52
GRAMD4-201ENST00000361034 LPAP08519 4548 aa5.53□□□□□ -1.52
GRAMD4-201ENST00000361034 KRTAP10-12P60413 245 aa5.52□□□□□ -1.53
GRAMD4-201ENST00000361034 LRP2P98164 4655 aa5.5□□□□□ -1.53
GRAMD4-201ENST00000361034 ABCA13Q86UQ4 5058 aa5.5□□□□□ -1.53
GRAMD4-201ENST00000361034 KRTAP12-3P60328 96 aa5.5□□□□□ -1.53
GRAMD4-201ENST00000361034 MUC2Q02817 5179 aa5.46□□□□□ -1.54
GRAMD4-201ENST00000361034 HERC2O95714 4834 aa5.45□□□□□ -1.54
GRAMD4-201ENST00000361034 KRTAP23-1A1A580 65 aa5.39□□□□□ -1.55
GRAMD4-201ENST00000361034 CRCT1Q9UGL9 99 aa5.38□□□□□ -1.55
GRAMD4-201ENST00000361034 TNXBP22105 4242 aa5.38□□□□□ -1.55
GRAMD4-201ENST00000361034 MT1HP80294 61 aa5.28□□□□□ -1.56
GRAMD4-201ENST00000361034 HERC1Q15751 4861 aa5.26□□□□□ -1.57
GRAMD4-201ENST00000361034 RNF213Q63HN8 5207 aa5.22□□□□□ -1.57
GRAMD4-201ENST00000361034 MT2AP02795 61 aa5.21□□□□□ -1.58
GRAMD4-201ENST00000361034 SPRR2GQ9BYE4 73 aa5.19□□□□□ -1.58
GRAMD4-201ENST00000361034 BIRC6Q9NR09 4857 aa5.18□□□□□ -1.58
GRAMD4-201ENST00000361034 FAT4Q6V0I7 4981 aa5.16□□□□□ -1.58
GRAMD4-201ENST00000361034 MT1FP04733 61 aa5.14□□□□□ -1.59
GRAMD4-201ENST00000361034 PCLOQ9Y6V0 5065 aa5.13□□□□□ -1.59
GRAMD4-201ENST00000361034 KRTAP10-5P60370 271 aa5.08□□□□□ -1.6
GRAMD4-201ENST00000361034 UBR4Q5T4S7 5183 aa5.07□□□□□ -1.6
GRAMD4-201ENST00000361034 KRTAP19-1Q8IUB9 90 aa5.01□□□□□ -1.61
GRAMD4-201ENST00000361034 KRTAP8-1Q8IUC2 63 aa4.99□□□□□ -1.61
GRAMD4-201ENST00000361034 LCE2CQ5TA81 110 aa4.93□□□□□ -1.62
GRAMD4-201ENST00000361034 KRTAP19-5Q3LI72 72 aa4.92□□□□□ -1.62
GRAMD4-201ENST00000361034 KRTAP19-8Q3LI54 63 aa4.89□□□□□ -1.63
GRAMD4-201ENST00000361034 HMCN2Q8NDA2 5059 aa4.88□□□□□ -1.63
GRAMD4-201ENST00000361034 FSIP2Q5CZC0 6907 aa4.87□□□□□ -1.63
GRAMD4-201ENST00000361034 KRTAP19-2Q3LHN2 52 aa4.87□□□□□ -1.63
GRAMD4-201ENST00000361034 KRTAP9-8Q9BYQ0 159 aa4.87□□□□□ -1.63
GRAMD4-201ENST00000361034 LCE3CQ5T5A8 94 aa4.84□□□□□ -1.63
GRAMD4-201ENST00000361034 MUC17Q685J3 4493 aa4.84□□□□□ -1.63
GRAMD4-201ENST00000361034 KRTAP10-7P60409 375 aaPredicted RBP4.82□□□□□ -1.64
GRAMD4-201ENST00000361034 SPRR5A0A1B0GTR4 108 aa4.79□□□□□ -1.64
GRAMD4-201ENST00000361034 SYNE1Q8NF91 8797 aaKnown RBP4.79□□□□□ -1.64
GRAMD4-201ENST00000361034 MT1BP07438 61 aa4.79□□□□□ -1.64
GRAMD4-201ENST00000361034 MT1XP80297 61 aa4.76□□□□□ -1.65
GRAMD4-201ENST00000361034 OBSCNQ5VST9 7968 aa4.74□□□□□ -1.65
GRAMD4-201ENST00000361034 KRTAP9-3Q9BYQ3 159 aa4.71□□□□□ -1.66
GRAMD4-201ENST00000361034 FLGP20930 4061 aaPredicted RBP4.69□□□□□ -1.66
GRAMD4-201ENST00000361034 USH2AO75445 5202 aa4.67□□□□□ -1.66
GRAMD4-201ENST00000361034 KRTAP4-8A0A0G2JLE6 195 aa4.61□□□□□ -1.67
GRAMD4-201ENST00000361034 KRTAP4-8Q9BYQ9 185 aa4.61□□□□□ -1.67
GRAMD4-201ENST00000361034 SPRR2FQ96RM1 72 aa4.55□□□□□ -1.68
GRAMD4-201ENST00000361034 KRTAP12-4P60329 112 aa4.54□□□□□ -1.68
GRAMD4-201ENST00000361034 LCE2BO14633 110 aa4.53□□□□□ -1.68
GRAMD4-201ENST00000361034 KRTAP19-4Q3LI73 84 aa4.5□□□□□ -1.69
GRAMD4-201ENST00000361034 KMT2DO14686 5537 aa4.49□□□□□ -1.69
GRAMD4-201ENST00000361034 KRTAP4-7Q9BYR0 210 aa4.48□□□□□ -1.69
GRAMD4-201ENST00000361034 LCE3BQ5TA77 95 aa4.47□□□□□ -1.69
GRAMD4-201ENST00000361034 MT1GP13640 62 aa4.47□□□□□ -1.69
GRAMD4-201ENST00000361034 LCE2AQ5TA79 106 aaPredicted RBP4.35□□□□□ -1.71
GRAMD4-201ENST00000361034 MT1LQ93083 61 aa4.24□□□□□ -1.73
GRAMD4-201ENST00000361034 MT1EP04732 61 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms