RNA–Protein interactions for RNA: ENST00000360467.5

COL4A2-201, Transcript of collagen type IV alpha 2 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A2, Length 6,281 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-201ENST00000360467 LORP23490 312 aaPredicted RBP7.38□□□□□ -1.23
COL4A2-201ENST00000360467 KRTAP8-1Q8IUC2 63 aa7.28□□□□□ -1.24
COL4A2-201ENST00000360467 DNAH9Q9NYC9 4486 aa7.27□□□□□ -1.25
COL4A2-201ENST00000360467 KRTAP10-5P60370 271 aa7.18□□□□□ -1.26
COL4A2-201ENST00000360467 ZNF469Q96JG9 3925 aaPredicted RBP7.16□□□□□ -1.26
COL4A2-201ENST00000360467 DNAH1Q9P2D7 4330 aa7.15□□□□□ -1.26
COL4A2-201ENST00000360467 INE1O15225 51 aa7.14□□□□□ -1.27
COL4A2-201ENST00000360467 KRTAP4-1Q9BYQ7 146 aa7.05□□□□□ -1.28
COL4A2-201ENST00000360467 MT1HP80294 61 aa7.02□□□□□ -1.29
COL4A2-201ENST00000360467 DNAH5Q8TE73 4624 aa7.01□□□□□ -1.29
COL4A2-201ENST00000360467 DNAH10Q8IVF4 4471 aa6.94□□□□□ -1.3
COL4A2-201ENST00000360467 PLECQ15149 4684 aaKnown RBP6.92□□□□□ -1.3
COL4A2-201ENST00000360467 DNAH2Q9P225 4427 aa6.91□□□□□ -1.3
COL4A2-201ENST00000360467 DNAH3Q8TD57 4116 aa6.87□□□□□ -1.31
COL4A2-201ENST00000360467 KRTAP23-1A1A580 65 aa6.86□□□□□ -1.31
COL4A2-201ENST00000360467 SPRR2FQ96RM1 72 aa6.84□□□□□ -1.31
COL4A2-201ENST00000360467 MT2AP02795 61 aa6.81□□□□□ -1.32
COL4A2-201ENST00000360467 DNAH11Q96DT5 4516 aa6.79□□□□□ -1.32
COL4A2-201ENST00000360467 FAT2Q9NYQ8 4349 aa6.78□□□□□ -1.32
COL4A2-201ENST00000360467 ANK2Q01484 3957 aa6.77□□□□□ -1.33
COL4A2-201ENST00000360467 DNAH17Q9UFH2 4485 aa6.74□□□□□ -1.33
COL4A2-201ENST00000360467 VPS13DQ5THJ4 4388 aa6.73□□□□□ -1.33
COL4A2-201ENST00000360467 MT1FP04733 61 aa6.72□□□□□ -1.33
COL4A2-201ENST00000360467 LRP1BQ9NZR2 4599 aa6.69□□□□□ -1.34
COL4A2-201ENST00000360467 STARD9Q9P2P6 4700 aa6.68□□□□□ -1.34
COL4A2-201ENST00000360467 KRTAP19-5Q3LI72 72 aa6.68□□□□□ -1.34
COL4A2-201ENST00000360467 KRTAP10-7P60409 375 aaPredicted RBP6.67□□□□□ -1.34
COL4A2-201ENST00000360467 KMT2AQ03164 3969 aa6.66□□□□□ -1.34
COL4A2-201ENST00000360467 DNAH8Q96JB1 4490 aa6.65□□□□□ -1.35
COL4A2-201ENST00000360467 FRAS1Q86XX4 4008 aa6.63□□□□□ -1.35
COL4A2-201ENST00000360467 VPS13BQ7Z7G8 4022 aa6.61□□□□□ -1.35
COL4A2-201ENST00000360467 DYNC2H1Q8NCM8 4307 aaKnown RBP6.61□□□□□ -1.35
COL4A2-201ENST00000360467 DYNC1H1Q14204 4646 aaKnown RBP6.58□□□□□ -1.36
COL4A2-201ENST00000360467 SPRR2GQ9BYE4 73 aa6.58□□□□□ -1.36
COL4A2-201ENST00000360467 PRKDCP78527 4128 aaKnown RBP6.55□□□□□ -1.36
COL4A2-201ENST00000360467 CMYA5Q8N3K9 4069 aa6.54□□□□□ -1.36
COL4A2-201ENST00000360467 FAT1Q14517 4588 aa6.52□□□□□ -1.37
COL4A2-201ENST00000360467 DNAH7Q8WXX0 4024 aa6.52□□□□□ -1.37
COL4A2-201ENST00000360467 SACSQ9NZJ4 4579 aa6.52□□□□□ -1.37
COL4A2-201ENST00000360467 SPRR2EP22531 72 aa6.5□□□□□ -1.37
COL4A2-201ENST00000360467 SPRR2BP35325 72 aa6.5□□□□□ -1.37
COL4A2-201ENST00000360467 SPRR2AP35326 72 aa6.5□□□□□ -1.37
COL4A2-201ENST00000360467 DNHD1Q96M86 4753 aa6.48□□□□□ -1.37
COL4A2-201ENST00000360467 LCE3CQ5T5A8 94 aa6.44□□□□□ -1.38
COL4A2-201ENST00000360467 LYSTQ99698 3801 aa6.41□□□□□ -1.38
COL4A2-201ENST00000360467 RYR1P21817 5038 aa6.35□□□□□ -1.39
COL4A2-201ENST00000360467 DNAH6Q9C0G6 4158 aa6.32□□□□□ -1.4
COL4A2-201ENST00000360467 APOBP04114 4563 aaKnown RBP6.32□□□□□ -1.4
COL4A2-201ENST00000360467 KRTAP17-1Q9BYP8 105 aa6.31□□□□□ -1.4
COL4A2-201ENST00000360467 LCE3BQ5TA77 95 aa6.29□□□□□ -1.4
COL4A2-201ENST00000360467 SPRR2DP22532 72 aa6.27□□□□□ -1.41
COL4A2-201ENST00000360467 MT1GP13640 62 aa6.2□□□□□ -1.42
COL4A2-201ENST00000360467 FAT3Q8TDW7 4589 aa6.18□□□□□ -1.42
COL4A2-201ENST00000360467 HECTD4Q9Y4D8 3996 aa6.14□□□□□ -1.43
COL4A2-201ENST00000360467 LCE2BO14633 110 aa6.13□□□□□ -1.43
COL4A2-201ENST00000360467 RYR3Q15413 4870 aa6.12□□□□□ -1.43
COL4A2-201ENST00000360467 KRTAP4-8A0A0G2JLE6 195 aa6.08□□□□□ -1.44
COL4A2-201ENST00000360467 KRTAP4-8Q9BYQ9 185 aa6.08□□□□□ -1.44
COL4A2-201ENST00000360467 KRTAP19-1Q8IUB9 90 aa6.07□□□□□ -1.44
COL4A2-201ENST00000360467 MT1XP80297 61 aa6.06□□□□□ -1.44
COL4A2-201ENST00000360467 KRTAP19-8Q3LI54 63 aa6.01□□□□□ -1.45
COL4A2-201ENST00000360467 HSPG2P98160 4391 aa5.99□□□□□ -1.45
COL4A2-201ENST00000360467 LPAP08519 4548 aa5.99□□□□□ -1.45
COL4A2-201ENST00000360467 MYCBP2O75592 4640 aa5.96□□□□□ -1.46
COL4A2-201ENST00000360467 LRP1Q07954 4544 aaKnown RBP5.96□□□□□ -1.46
COL4A2-201ENST00000360467 MT1BP07438 61 aa5.95□□□□□ -1.46
COL4A2-201ENST00000360467 KRTAP9-8Q9BYQ0 159 aa5.94□□□□□ -1.46
COL4A2-201ENST00000360467 KRTAP12-4P60329 112 aa5.92□□□□□ -1.46
COL4A2-201ENST00000360467 PKHD1L1Q86WI1 4243 aa5.91□□□□□ -1.46
COL4A2-201ENST00000360467 PKD1P98161 4303 aa5.82□□□□□ -1.48
COL4A2-201ENST00000360467 KRTAP9-3Q9BYQ3 159 aa5.82□□□□□ -1.48
COL4A2-201ENST00000360467 LCE2CQ5TA81 110 aa5.76□□□□□ -1.49
COL4A2-201ENST00000360467 KRTAP19-4Q3LI73 84 aa5.75□□□□□ -1.49
COL4A2-201ENST00000360467 KRTAP4-7Q9BYR0 210 aa5.75□□□□□ -1.49
COL4A2-201ENST00000360467 PKHD1P08F94 4074 aa5.75□□□□□ -1.49
COL4A2-201ENST00000360467 HYDINQ4G0P3 5121 aa5.72□□□□□ -1.49
COL4A2-201ENST00000360467 LCE2DQ5TA82 110 aaPredicted RBP5.72□□□□□ -1.49
COL4A2-201ENST00000360467 MT4P47944 62 aa5.7□□□□□ -1.5
COL4A2-201ENST00000360467 LCE3DQ9BYE3 92 aa5.68□□□□□ -1.5
COL4A2-201ENST00000360467 TNXBP22105 4242 aa5.67□□□□□ -1.5
COL4A2-201ENST00000360467 RYR2Q92736 4967 aa5.65□□□□□ -1.5
COL4A2-201ENST00000360467 HERC1Q15751 4861 aa5.62□□□□□ -1.51
COL4A2-201ENST00000360467 KRTAP19-3Q7Z4W3 81 aa5.6□□□□□ -1.51
COL4A2-201ENST00000360467 KIAA1109Q2LD37 5005 aa5.54□□□□□ -1.52
COL4A2-201ENST00000360467 LRP2P98164 4655 aa5.53□□□□□ -1.52
COL4A2-201ENST00000360467 KRTAP9-2Q9BYQ4 174 aa5.53□□□□□ -1.52
COL4A2-201ENST00000360467 LCE3EQ5T5B0 92 aa5.52□□□□□ -1.53
COL4A2-201ENST00000360467 MT1LQ93083 61 aa5.5□□□□□ -1.53
COL4A2-201ENST00000360467 LOC100996750A0A140TA64 210 aa5.49□□□□□ -1.53
COL4A2-201ENST00000360467 HERC2O95714 4834 aa5.48□□□□□ -1.53
COL4A2-201ENST00000360467 MT1EP04732 61 aa5.46□□□□□ -1.54
COL4A2-201ENST00000360467 BIRC6Q9NR09 4857 aa5.43□□□□□ -1.54
COL4A2-201ENST00000360467 KRTAP4-3Q9BYR4 195 aa5.43□□□□□ -1.54
COL4A2-201ENST00000360467 MUC17Q685J3 4493 aa5.43□□□□□ -1.54
COL4A2-201ENST00000360467 LCE1BQ5T7P3 118 aa5.38□□□□□ -1.55
COL4A2-201ENST00000360467 SPRR5A0A1B0GTR4 108 aa5.37□□□□□ -1.55
COL4A2-201ENST00000360467 MT1MQ8N339 61 aa5.34□□□□□ -1.55
COL4A2-201ENST00000360467 LCE1DQ5T752 114 aa5.33□□□□□ -1.56
COL4A2-201ENST00000360467 KRTAP19-2Q3LHN2 52 aa5.33□□□□□ -1.56
COL4A2-201ENST00000360467 PCLOQ9Y6V0 5065 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms