RNA–Protein interactions for RNA: ENST00000360439.8

SIN3A-201, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 5,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-201ENST00000360439 STARD9Q9P2P6 4700 aa4.93□□□□□ -1.62
SIN3A-201ENST00000360439 DNAH10Q8IVF4 4471 aa4.93□□□□□ -1.62
SIN3A-201ENST00000360439 KRTAP23-1A1A580 65 aa4.93□□□□□ -1.62
SIN3A-201ENST00000360439 DNAH17Q9UFH2 4485 aa4.9□□□□□ -1.62
SIN3A-201ENST00000360439 VPS13DQ5THJ4 4388 aa4.9□□□□□ -1.62
SIN3A-201ENST00000360439 KRTAP10-10P60014 251 aa4.9□□□□□ -1.63
SIN3A-201ENST00000360439 INE1O15225 51 aa4.88□□□□□ -1.63
SIN3A-201ENST00000360439 KRTAP13-4Q3LI77 160 aa4.85□□□□□ -1.63
SIN3A-201ENST00000360439 DNAH11Q96DT5 4516 aa4.85□□□□□ -1.63
SIN3A-201ENST00000360439 DNAH6Q9C0G6 4158 aa4.83□□□□□ -1.64
SIN3A-201ENST00000360439 KRTAP12-1P59990 96 aa4.82□□□□□ -1.64
SIN3A-201ENST00000360439 KRTAP10-6P60371 365 aaPredicted RBP4.81□□□□□ -1.64
SIN3A-201ENST00000360439 DYNC1H1Q14204 4646 aaKnown RBP4.8□□□□□ -1.64
SIN3A-201ENST00000360439 TNP1P09430 55 aa4.79□□□□□ -1.64
SIN3A-201ENST00000360439 DNAH8Q96JB1 4490 aa4.78□□□□□ -1.64
SIN3A-201ENST00000360439 KIAA1109Q2LD37 5005 aa4.77□□□□□ -1.65
SIN3A-201ENST00000360439 RYR1P21817 5038 aa4.76□□□□□ -1.65
SIN3A-201ENST00000360439 FAT1Q14517 4588 aa4.76□□□□□ -1.65
SIN3A-201ENST00000360439 LRP1BQ9NZR2 4599 aa4.76□□□□□ -1.65
SIN3A-201ENST00000360439 KMT2AQ03164 3969 aa4.76□□□□□ -1.65
SIN3A-201ENST00000360439 DNAH2Q9P225 4427 aa4.76□□□□□ -1.65
SIN3A-201ENST00000360439 RYR3Q15413 4870 aa4.74□□□□□ -1.65
SIN3A-201ENST00000360439 KRTAP3-3Q9BYR6 98 aa4.74□□□□□ -1.65
SIN3A-201ENST00000360439 KRTAP3-2Q9BYR7 98 aa4.73□□□□□ -1.65
SIN3A-201ENST00000360439 LYSTQ99698 3801 aa4.69□□□□□ -1.66
SIN3A-201ENST00000360439 HECTD4Q9Y4D8 3996 aa4.68□□□□□ -1.66
SIN3A-201ENST00000360439 DNAH7Q8WXX0 4024 aa4.68□□□□□ -1.66
SIN3A-201ENST00000360439 RYR2Q92736 4967 aa4.66□□□□□ -1.66
SIN3A-201ENST00000360439 SACSQ9NZJ4 4579 aa4.65□□□□□ -1.66
SIN3A-201ENST00000360439 FAT2Q9NYQ8 4349 aa4.63□□□□□ -1.67
SIN3A-201ENST00000360439 KMT2CQ8NEZ4 4911 aaKnown RBP4.59□□□□□ -1.67
SIN3A-201ENST00000360439 FRAS1Q86XX4 4008 aa4.59□□□□□ -1.67
SIN3A-201ENST00000360439 BIRC6Q9NR09 4857 aa4.59□□□□□ -1.67
SIN3A-201ENST00000360439 KRTAP17-1Q9BYP8 105 aa4.58□□□□□ -1.68
SIN3A-201ENST00000360439 HYDINQ4G0P3 5121 aa4.58□□□□□ -1.68
SIN3A-201ENST00000360439 VPS13BQ7Z7G8 4022 aa4.55□□□□□ -1.68
SIN3A-201ENST00000360439 HERC2O95714 4834 aa4.55□□□□□ -1.68
SIN3A-201ENST00000360439 APOBP04114 4563 aaKnown RBP4.54□□□□□ -1.68
SIN3A-201ENST00000360439 LRP1Q07954 4544 aaKnown RBP4.45□□□□□ -1.7
SIN3A-201ENST00000360439 PKHD1P08F94 4074 aa4.44□□□□□ -1.7
SIN3A-201ENST00000360439 KRTAP4-1Q9BYQ7 146 aa4.42□□□□□ -1.7
SIN3A-201ENST00000360439 EPPK1P58107 5090 aaKnown RBP4.41□□□□□ -1.7
SIN3A-201ENST00000360439 MYCBP2O75592 4640 aa4.4□□□□□ -1.7
SIN3A-201ENST00000360439 PKHD1L1Q86WI1 4243 aa4.4□□□□□ -1.7
SIN3A-201ENST00000360439 FAT3Q8TDW7 4589 aa4.4□□□□□ -1.71
SIN3A-201ENST00000360439 HSPG2P98160 4391 aa4.38□□□□□ -1.71
SIN3A-201ENST00000360439 PKD1P98161 4303 aa4.38□□□□□ -1.71
SIN3A-201ENST00000360439 MT1HP80294 61 aa4.31□□□□□ -1.72
SIN3A-201ENST00000360439 PCLOQ9Y6V0 5065 aa4.27□□□□□ -1.73
SIN3A-201ENST00000360439 ABCA13Q86UQ4 5058 aa4.26□□□□□ -1.73
SIN3A-201ENST00000360439 LRP2P98164 4655 aa4.25□□□□□ -1.73
SIN3A-201ENST00000360439 LORP23490 312 aaPredicted RBP4.23□□□□□ -1.73
SIN3A-201ENST00000360439 TNXBP22105 4242 aa4.19□□□□□ -1.74
SIN3A-201ENST00000360439 HERC1Q15751 4861 aa4.19□□□□□ -1.74
SIN3A-201ENST00000360439 MT2AP02795 61 aa4.16□□□□□ -1.74
SIN3A-201ENST00000360439 MT1FP04733 61 aa4.1□□□□□ -1.75
SIN3A-201ENST00000360439 LPAP08519 4548 aa4.09□□□□□ -1.75
SIN3A-201ENST00000360439 KRTAP10-12P60413 245 aa4.04□□□□□ -1.76
SIN3A-201ENST00000360439 SPRR2GQ9BYE4 73 aa4.03□□□□□ -1.76
SIN3A-201ENST00000360439 LCE3AQ5TA76 89 aa4□□□□□ -1.77
SIN3A-201ENST00000360439 KRTAP8-1Q8IUC2 63 aa3.97□□□□□ -1.77
SIN3A-201ENST00000360439 LCE2CQ5TA81 110 aa3.96□□□□□ -1.78
SIN3A-201ENST00000360439 UBR4Q5T4S7 5183 aa3.95□□□□□ -1.78
SIN3A-201ENST00000360439 KRTAP12-3P60328 96 aa3.93□□□□□ -1.78
SIN3A-201ENST00000360439 SPRR5A0A1B0GTR4 108 aa3.92□□□□□ -1.78
SIN3A-201ENST00000360439 RNF213Q63HN8 5207 aa3.92□□□□□ -1.78
SIN3A-201ENST00000360439 MUC17Q685J3 4493 aa3.92□□□□□ -1.78
SIN3A-201ENST00000360439 FSIP2Q5CZC0 6907 aa3.91□□□□□ -1.78
SIN3A-201ENST00000360439 KRTAP9-8Q9BYQ0 159 aa3.89□□□□□ -1.79
SIN3A-201ENST00000360439 CRCT1Q9UGL9 99 aa3.87□□□□□ -1.79
SIN3A-201ENST00000360439 HMCN2Q8NDA2 5059 aa3.87□□□□□ -1.79
SIN3A-201ENST00000360439 KRTAP19-2Q3LHN2 52 aa3.87□□□□□ -1.79
SIN3A-201ENST00000360439 FAT4Q6V0I7 4981 aa3.84□□□□□ -1.79
SIN3A-201ENST00000360439 KRTAP19-1Q8IUB9 90 aa3.83□□□□□ -1.8
SIN3A-201ENST00000360439 SPRR2FQ96RM1 72 aa3.82□□□□□ -1.8
SIN3A-201ENST00000360439 KRTAP19-8Q3LI54 63 aa3.8□□□□□ -1.8
SIN3A-201ENST00000360439 KRTAP9-2Q9BYQ4 174 aa3.8□□□□□ -1.8
SIN3A-201ENST00000360439 KRTAP10-5P60370 271 aa3.8□□□□□ -1.8
SIN3A-201ENST00000360439 KRTAP9-3Q9BYQ3 159 aa3.79□□□□□ -1.8
SIN3A-201ENST00000360439 MUC2Q02817 5179 aa3.76□□□□□ -1.81
SIN3A-201ENST00000360439 LCE2AQ5TA79 106 aaPredicted RBP3.75□□□□□ -1.81
SIN3A-201ENST00000360439 MT1BP07438 61 aa3.72□□□□□ -1.81
SIN3A-201ENST00000360439 FLGP20930 4061 aaPredicted RBP3.72□□□□□ -1.81
SIN3A-201ENST00000360439 KRTAP19-4Q3LI73 84 aa3.71□□□□□ -1.82
SIN3A-201ENST00000360439 LCE2BO14633 110 aa3.7□□□□□ -1.82
SIN3A-201ENST00000360439 MT1XP80297 61 aa3.66□□□□□ -1.82
SIN3A-201ENST00000360439 KRTAP10-7P60409 375 aaPredicted RBP3.65□□□□□ -1.83
SIN3A-201ENST00000360439 LCE3CQ5T5A8 94 aa3.63□□□□□ -1.83
SIN3A-201ENST00000360439 SPRR2EP22531 72 aa3.62□□□□□ -1.83
SIN3A-201ENST00000360439 SPRR2BP35325 72 aa3.62□□□□□ -1.83
SIN3A-201ENST00000360439 SPRR2AP35326 72 aa3.62□□□□□ -1.83
SIN3A-201ENST00000360439 KRTAP19-5Q3LI72 72 aa3.62□□□□□ -1.83
SIN3A-201ENST00000360439 KRTAP9-6A0A140TA67 174 aa3.62□□□□□ -1.83
SIN3A-201ENST00000360439 LCE2DQ5TA82 110 aaPredicted RBP3.61□□□□□ -1.83
SIN3A-201ENST00000360439 KRTAP12-4P60329 112 aa3.61□□□□□ -1.83
SIN3A-201ENST00000360439 KRTAP4-8A0A0G2JLE6 195 aa3.57□□□□□ -1.84
SIN3A-201ENST00000360439 KRTAP4-8Q9BYQ9 185 aa3.57□□□□□ -1.84
SIN3A-201ENST00000360439 KRTAP19-6Q3LI70 58 aa3.51□□□□□ -1.85
SIN3A-201ENST00000360439 SPRR2DP22532 72 aa3.5□□□□□ -1.85
SIN3A-201ENST00000360439 SYNE1Q8NF91 8797 aaKnown RBP3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 150.1 ms