RNA–Protein interactions for RNA: ENST00000359863.8

TRRAP-202, Transcript of transformation/transcription domain associated protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRRAP, Length 12,677 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRRAP-202ENST00000359863 KRTAP10-6P60371 365 aaPredicted RBP3.29□□□□□ -1.88
TRRAP-202ENST00000359863 CMYA5Q8N3K9 4069 aa3.28□□□□□ -1.88
TRRAP-202ENST00000359863 DNAH17Q9UFH2 4485 aa3.27□□□□□ -1.89
TRRAP-202ENST00000359863 DNAH7Q8WXX0 4024 aa3.27□□□□□ -1.89
TRRAP-202ENST00000359863 MT1HL1P0DM35 61 aa3.27□□□□□ -1.89
TRRAP-202ENST00000359863 KRTAP12-3P60328 96 aa3.25□□□□□ -1.89
TRRAP-202ENST00000359863 VPS13DQ5THJ4 4388 aa3.24□□□□□ -1.89
TRRAP-202ENST00000359863 DNHD1Q96M86 4753 aa3.23□□□□□ -1.89
TRRAP-202ENST00000359863 FRAS1Q86XX4 4008 aa3.23□□□□□ -1.89
TRRAP-202ENST00000359863 HECTD4Q9Y4D8 3996 aa3.22□□□□□ -1.89
TRRAP-202ENST00000359863 PLECQ15149 4684 aaKnown RBP3.22□□□□□ -1.89
TRRAP-202ENST00000359863 DNAH2Q9P225 4427 aa3.21□□□□□ -1.9
TRRAP-202ENST00000359863 LYSTQ99698 3801 aa3.21□□□□□ -1.9
TRRAP-202ENST00000359863 DNAH8Q96JB1 4490 aa3.21□□□□□ -1.9
TRRAP-202ENST00000359863 KRTAP10-4P60372 401 aaPredicted RBP3.2□□□□□ -1.9
TRRAP-202ENST00000359863 DNAH11Q96DT5 4516 aa3.18□□□□□ -1.9
TRRAP-202ENST00000359863 KRTAP3-3Q9BYR6 98 aa3.17□□□□□ -1.9
TRRAP-202ENST00000359863 DNAH6Q9C0G6 4158 aa3.17□□□□□ -1.9
TRRAP-202ENST00000359863 KRTAP4-5Q9BYR2 181 aa3.15□□□□□ -1.9
TRRAP-202ENST00000359863 KRTAP3-2Q9BYR7 98 aa3.15□□□□□ -1.91
TRRAP-202ENST00000359863 MT3P25713 68 aa3.13□□□□□ -1.91
TRRAP-202ENST00000359863 SACSQ9NZJ4 4579 aa3.12□□□□□ -1.91
TRRAP-202ENST00000359863 KMT2AQ03164 3969 aa3.11□□□□□ -1.91
TRRAP-202ENST00000359863 HYDINQ4G0P3 5121 aa3.1□□□□□ -1.91
TRRAP-202ENST00000359863 VPS13BQ7Z7G8 4022 aa3.08□□□□□ -1.92
TRRAP-202ENST00000359863 DNAH5Q8TE73 4624 aa3.05□□□□□ -1.92
TRRAP-202ENST00000359863 PRKDCP78527 4128 aaKnown RBP3.05□□□□□ -1.92
TRRAP-202ENST00000359863 DYNC2H1Q8NCM8 4307 aaKnown RBP3.04□□□□□ -1.92
TRRAP-202ENST00000359863 CRCT1Q9UGL9 99 aa3.03□□□□□ -1.92
TRRAP-202ENST00000359863 STARD9Q9P2P6 4700 aa3.01□□□□□ -1.93
TRRAP-202ENST00000359863 LCE3AQ5TA76 89 aa3.01□□□□□ -1.93
TRRAP-202ENST00000359863 FAT1Q14517 4588 aa3□□□□□ -1.93
TRRAP-202ENST00000359863 FAT2Q9NYQ8 4349 aa2.99□□□□□ -1.93
TRRAP-202ENST00000359863 LRP1BQ9NZR2 4599 aa2.99□□□□□ -1.93
TRRAP-202ENST00000359863 KRTAP8-1Q8IUC2 63 aa2.98□□□□□ -1.93
TRRAP-202ENST00000359863 KRTAP10-5P60370 271 aa2.97□□□□□ -1.93
TRRAP-202ENST00000359863 LORP23490 312 aaPredicted RBP2.95□□□□□ -1.94
TRRAP-202ENST00000359863 LPAP08519 4548 aa2.92□□□□□ -1.94
TRRAP-202ENST00000359863 KRTAP10-7P60409 375 aaPredicted RBP2.92□□□□□ -1.94
TRRAP-202ENST00000359863 FLGP20930 4061 aaPredicted RBP2.91□□□□□ -1.94
TRRAP-202ENST00000359863 DYNC1H1Q14204 4646 aaKnown RBP2.89□□□□□ -1.95
TRRAP-202ENST00000359863 MT1HP80294 61 aa2.89□□□□□ -1.95
TRRAP-202ENST00000359863 SPRR2GQ9BYE4 73 aa2.88□□□□□ -1.95
TRRAP-202ENST00000359863 APOBP04114 4563 aaKnown RBP2.86□□□□□ -1.95
TRRAP-202ENST00000359863 KRTAP4-1Q9BYQ7 146 aa2.86□□□□□ -1.95
TRRAP-202ENST00000359863 FAT3Q8TDW7 4589 aa2.84□□□□□ -1.95
TRRAP-202ENST00000359863 PKHD1L1Q86WI1 4243 aa2.84□□□□□ -1.95
TRRAP-202ENST00000359863 LCE3CQ5T5A8 94 aa2.83□□□□□ -1.96
TRRAP-202ENST00000359863 RYR3Q15413 4870 aa2.81□□□□□ -1.96
TRRAP-202ENST00000359863 MT2AP02795 61 aa2.8□□□□□ -1.96
TRRAP-202ENST00000359863 PKHD1P08F94 4074 aa2.79□□□□□ -1.96
TRRAP-202ENST00000359863 MYCBP2O75592 4640 aa2.77□□□□□ -1.97
TRRAP-202ENST00000359863 KMT2CQ8NEZ4 4911 aaKnown RBP2.75□□□□□ -1.97
TRRAP-202ENST00000359863 HSPG2P98160 4391 aa2.75□□□□□ -1.97
TRRAP-202ENST00000359863 MT1FP04733 61 aa2.75□□□□□ -1.97
TRRAP-202ENST00000359863 PKD1P98161 4303 aa2.74□□□□□ -1.97
TRRAP-202ENST00000359863 SPRR2FQ96RM1 72 aa2.72□□□□□ -1.97
TRRAP-202ENST00000359863 KRTAP19-5Q3LI72 72 aa2.72□□□□□ -1.97
TRRAP-202ENST00000359863 LRP1Q07954 4544 aaKnown RBP2.7□□□□□ -1.98
TRRAP-202ENST00000359863 KRTAP12-4P60329 112 aa2.69□□□□□ -1.98
TRRAP-202ENST00000359863 RYR2Q92736 4967 aa2.68□□□□□ -1.98
TRRAP-202ENST00000359863 EPPK1P58107 5090 aaKnown RBP2.66□□□□□ -1.98
TRRAP-202ENST00000359863 TNXBP22105 4242 aa2.63□□□□□ -1.99
TRRAP-202ENST00000359863 SPRR5A0A1B0GTR4 108 aa2.62□□□□□ -1.99
TRRAP-202ENST00000359863 RYR1P21817 5038 aa2.61□□□□□ -1.99
TRRAP-202ENST00000359863 KRTAP19-8Q3LI54 63 aa2.6□□□□□ -1.99
TRRAP-202ENST00000359863 SPRR2EP22531 72 aa2.58□□□□□ -2
TRRAP-202ENST00000359863 SPRR2BP35325 72 aa2.58□□□□□ -2
TRRAP-202ENST00000359863 SPRR2AP35326 72 aa2.58□□□□□ -2
TRRAP-202ENST00000359863 LCE3DQ9BYE3 92 aa2.56□□□□□ -2
TRRAP-202ENST00000359863 MT1GP13640 62 aa2.55□□□□□ -2
TRRAP-202ENST00000359863 KRTAP19-1Q8IUB9 90 aa2.55□□□□□ -2
TRRAP-202ENST00000359863 MT1XP80297 61 aa2.55□□□□□ -2
TRRAP-202ENST00000359863 LCE3EQ5T5B0 92 aa2.55□□□□□ -2
TRRAP-202ENST00000359863 KRTAP17-1Q9BYP8 105 aa2.53□□□□□ -2
TRRAP-202ENST00000359863 SPRR2DP22532 72 aa2.51□□□□□ -2.01
TRRAP-202ENST00000359863 ABCA13Q86UQ4 5058 aa2.51□□□□□ -2.01
TRRAP-202ENST00000359863 LRP2P98164 4655 aa2.5□□□□□ -2.01
TRRAP-202ENST00000359863 MUC17Q685J3 4493 aa2.5□□□□□ -2.01
TRRAP-202ENST00000359863 LCE2BO14633 110 aa2.5□□□□□ -2.01
TRRAP-202ENST00000359863 KRTAP9-8Q9BYQ0 159 aa2.49□□□□□ -2.01
TRRAP-202ENST00000359863 LCE3BQ5TA77 95 aa2.48□□□□□ -2.01
TRRAP-202ENST00000359863 MT1BP07438 61 aa2.47□□□□□ -2.01
TRRAP-202ENST00000359863 MT1LQ93083 61 aa2.46□□□□□ -2.02
TRRAP-202ENST00000359863 KIAA1109Q2LD37 5005 aa2.45□□□□□ -2.02
TRRAP-202ENST00000359863 KRTAP9-3Q9BYQ3 159 aa2.45□□□□□ -2.02
TRRAP-202ENST00000359863 HERC1Q15751 4861 aa2.44□□□□□ -2.02
TRRAP-202ENST00000359863 LCE2CQ5TA81 110 aa2.42□□□□□ -2.02
TRRAP-202ENST00000359863 MUC2Q02817 5179 aa2.42□□□□□ -2.02
TRRAP-202ENST00000359863 FAT4Q6V0I7 4981 aa2.42□□□□□ -2.02
TRRAP-202ENST00000359863 HERC2O95714 4834 aa2.41□□□□□ -2.02
TRRAP-202ENST00000359863 BIRC6Q9NR09 4857 aa2.39□□□□□ -2.03
TRRAP-202ENST00000359863 KRTAP4-8A0A0G2JLE6 195 aa2.39□□□□□ -2.03
TRRAP-202ENST00000359863 KRTAP4-8Q9BYQ9 185 aa2.39□□□□□ -2.03
TRRAP-202ENST00000359863 UBR4Q5T4S7 5183 aa2.37□□□□□ -2.03
TRRAP-202ENST00000359863 PCLOQ9Y6V0 5065 aa2.36□□□□□ -2.03
TRRAP-202ENST00000359863 MT1EP04732 61 aa2.35□□□□□ -2.03
TRRAP-202ENST00000359863 KRTAP19-3Q7Z4W3 81 aa2.35□□□□□ -2.03
TRRAP-202ENST00000359863 KRTAP19-2Q3LHN2 52 aa2.31□□□□□ -2.04
TRRAP-202ENST00000359863 HMCN2Q8NDA2 5059 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 259 ms