RNA–Protein interactions for RNA: ENST00000359785.9

PTPN22-201, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN22, Length 3,654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-201ENST00000359785 TYMSOSQ8TAI1 123 aa2.34□□□□□ -2.03
PTPN22-201ENST00000359785 TLN2Q9Y4G6 2542 aa2.34□□□□□ -2.03
PTPN22-201ENST00000359785 RPL37P61927 97 aaKnown RBP2.33□□□□□ -2.04
PTPN22-201ENST00000359785 SONP18583 2426 aaKnown RBP2.33□□□□□ -2.04
PTPN22-201ENST00000359785 PRB2P02812 416 aaPredicted RBP2.33□□□□□ -2.04
PTPN22-201ENST00000359785 TPRXLQ17RH7 258 aa2.33□□□□□ -2.04
PTPN22-201ENST00000359785 K7ERS5 55 aa2.32□□□□□ -2.04
PTPN22-201ENST00000359785 HECTD1Q9ULT8 2610 aa2.31□□□□□ -2.04
PTPN22-201ENST00000359785 TENM1Q9UKZ4 2725 aa2.3□□□□□ -2.04
PTPN22-201ENST00000359785 ACANP16112 2415 aa2.3□□□□□ -2.04
PTPN22-201ENST00000359785 A0A0A0MQY5 61 aa2.3□□□□□ -2.04
PTPN22-201ENST00000359785 MUC17Q685J3 4493 aa2.3□□□□□ -2.04
PTPN22-201ENST00000359785 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.29□□□□□ -2.04
PTPN22-201ENST00000359785 M0QZ58 72 aa2.29□□□□□ -2.04
PTPN22-201ENST00000359785 KRTAP10-1P60331 282 aa2.28□□□□□ -2.04
PTPN22-201ENST00000359785 CIRBP-AS1Q8TBR5 109 aa2.28□□□□□ -2.04
PTPN22-201ENST00000359785 DNHD1Q96M86 4753 aa2.27□□□□□ -2.05
PTPN22-201ENST00000359785 KRTAP13-4Q3LI77 160 aa2.27□□□□□ -2.05
PTPN22-201ENST00000359785 KRTAP12-1P59990 96 aa2.27□□□□□ -2.05
PTPN22-201ENST00000359785 KRTAP10-2P60368 255 aa2.27□□□□□ -2.05
PTPN22-201ENST00000359785 PP632Q6XCG6 107 aa2.27□□□□□ -2.05
PTPN22-201ENST00000359785 LRP1BQ9NZR2 4599 aa2.27□□□□□ -2.05
PTPN22-201ENST00000359785 CCDC168Q8NDH2 2452 aa2.26□□□□□ -2.05
PTPN22-201ENST00000359785 MEGF8Q7Z7M0 2845 aa2.26□□□□□ -2.05
PTPN22-201ENST00000359785 S4R3F8 94 aa2.24□□□□□ -2.05
PTPN22-201ENST00000359785 KRTAP10-8P60410 259 aa2.24□□□□□ -2.05
PTPN22-201ENST00000359785 ATRQ13535 2644 aa2.24□□□□□ -2.05
PTPN22-201ENST00000359785 TENM3Q9P273 2699 aa2.24□□□□□ -2.05
PTPN22-201ENST00000359785 FLNBO75369 2602 aaKnown RBP2.23□□□□□ -2.05
PTPN22-201ENST00000359785 MTORP42345 2549 aa2.23□□□□□ -2.05
PTPN22-201ENST00000359785 LCE5AQ5TCM9 118 aa2.22□□□□□ -2.05
PTPN22-201ENST00000359785 Q8N1X5 172 aa2.22□□□□□ -2.05
PTPN22-201ENST00000359785 COL7A1Q02388 2944 aa2.21□□□□□ -2.06
PTPN22-201ENST00000359785 KRTAP12-2P59991 146 aa2.2□□□□□ -2.06
PTPN22-201ENST00000359785 RYR2Q92736 4967 aa2.19□□□□□ -2.06
PTPN22-201ENST00000359785 PKD1L1Q8TDX9 2849 aa2.18□□□□□ -2.06
PTPN22-201ENST00000359785 STAB1Q9NY15 2570 aa2.17□□□□□ -2.06
PTPN22-201ENST00000359785 JMJD1CQ15652 2540 aa2.17□□□□□ -2.06
PTPN22-201ENST00000359785 CRIPTQ9P021 101 aa2.15□□□□□ -2.06
PTPN22-201ENST00000359785 SRRM2Q9UQ35 2752 aaKnown RBP2.15□□□□□ -2.06
PTPN22-201ENST00000359785 Q5VSD8 79 aa2.14□□□□□ -2.07
PTPN22-201ENST00000359785 COL6A5A8TX70 2615 aa2.14□□□□□ -2.07
PTPN22-201ENST00000359785 HERC1Q15751 4861 aa2.14□□□□□ -2.07
PTPN22-201ENST00000359785 MT1HL1P0DM35 61 aa2.13□□□□□ -2.07
PTPN22-201ENST00000359785 PLAC4Q8WY50 150 aa2.13□□□□□ -2.07
PTPN22-201ENST00000359785 KRTAP19-2Q3LHN2 52 aa2.13□□□□□ -2.07
PTPN22-201ENST00000359785 NBEAL1Q6ZS30 2694 aa2.13□□□□□ -2.07
PTPN22-201ENST00000359785 SEC61BP60468 96 aaKnown RBP2.12□□□□□ -2.07
PTPN22-201ENST00000359785 NBEAL2Q6ZNJ1 2754 aa2.12□□□□□ -2.07
PTPN22-201ENST00000359785 NDUFAF8A1L188 74 aa2.12□□□□□ -2.07
PTPN22-201ENST00000359785 LCE4AQ5TA78 99 aa2.11□□□□□ -2.07
PTPN22-201ENST00000359785 INE1O15225 51 aa2.11□□□□□ -2.07
PTPN22-201ENST00000359785 SETD2Q9BYW2 2564 aaPredicted RBP2.1□□□□□ -2.07
PTPN22-201ENST00000359785 SPINT4Q6UDR6 99 aa2.1□□□□□ -2.07
PTPN22-201ENST00000359785 C10orf95Q9H7T3 257 aa2.1□□□□□ -2.07
PTPN22-201ENST00000359785 STAB2Q8WWQ8 2551 aa2.09□□□□□ -2.08
PTPN22-201ENST00000359785 KRTAP5-9P26371 169 aa2.09□□□□□ -2.08
PTPN22-201ENST00000359785 HYDINQ4G0P3 5121 aa2.09□□□□□ -2.08
PTPN22-201ENST00000359785 KRTAP19-4Q3LI73 84 aa2.09□□□□□ -2.08
PTPN22-201ENST00000359785 CAMK2N1Q7Z7J9 78 aa2.09□□□□□ -2.08
PTPN22-201ENST00000359785 PRO2289Q9P1D8 64 aa2.09□□□□□ -2.08
PTPN22-201ENST00000359785 RYR1P21817 5038 aa2.08□□□□□ -2.08
PTPN22-201ENST00000359785 TGP01266 2768 aa2.08□□□□□ -2.08
PTPN22-201ENST00000359785 C9orf92A6NGG3 77 aa2.07□□□□□ -2.08
PTPN22-201ENST00000359785 MGAM2Q2M2H8 2515 aa2.06□□□□□ -2.08
PTPN22-201ENST00000359785 LUZP6Q538Z0 58 aa2.05□□□□□ -2.08
PTPN22-201ENST00000359785 RYR3Q15413 4870 aa2.05□□□□□ -2.08
PTPN22-201ENST00000359785 BIRC6Q9NR09 4857 aa2.04□□□□□ -2.08
PTPN22-201ENST00000359785 NOTCH1P46531 2555 aa2.03□□□□□ -2.08
PTPN22-201ENST00000359785 KRTAP9-7A8MTY7 169 aa2.01□□□□□ -2.09
PTPN22-201ENST00000359785 SMR3BP02814 79 aaPredicted RBP2.01□□□□□ -2.09
PTPN22-201ENST00000359785 HERC2O95714 4834 aa2□□□□□ -2.09
PTPN22-201ENST00000359785 FLG2Q5D862 2391 aaPredicted RBP1.99□□□□□ -2.09
PTPN22-201ENST00000359785 SPRR2GQ9BYE4 73 aa1.97□□□□□ -2.09
PTPN22-201ENST00000359785 KRTAP8-1Q8IUC2 63 aa1.96□□□□□ -2.1
PTPN22-201ENST00000359785 TNP1P09430 55 aa1.94□□□□□ -2.1
PTPN22-201ENST00000359785 LRP2P98164 4655 aa1.93□□□□□ -2.1
PTPN22-201ENST00000359785 A0A0D9SG42 100 aa1.92□□□□□ -2.1
PTPN22-201ENST00000359785 LPAP08519 4548 aa1.92□□□□□ -2.1
PTPN22-201ENST00000359785 KMT2CQ8NEZ4 4911 aaKnown RBP1.91□□□□□ -2.1
PTPN22-201ENST00000359785 KRTAP19-8Q3LI54 63 aa1.91□□□□□ -2.1
PTPN22-201ENST00000359785 KRTAP5-4Q6L8H1 288 aa1.9□□□□□ -2.11
PTPN22-201ENST00000359785 KRTAP9-3Q9BYQ3 159 aa1.89□□□□□ -2.11
PTPN22-201ENST00000359785 HMCN1Q96RW7 5635 aa1.89□□□□□ -2.11
PTPN22-201ENST00000359785 R4GN34 69 aa1.89□□□□□ -2.11
PTPN22-201ENST00000359785 KRTAP10-5P60370 271 aa1.88□□□□□ -2.11
PTPN22-201ENST00000359785 KRTAP10-12P60413 245 aa1.87□□□□□ -2.11
PTPN22-201ENST00000359785 PCLOQ9Y6V0 5065 aa1.87□□□□□ -2.11
PTPN22-201ENST00000359785 HMCN2Q8NDA2 5059 aa1.86□□□□□ -2.11
PTPN22-201ENST00000359785 KIAA1109Q2LD37 5005 aa1.84□□□□□ -2.11
PTPN22-201ENST00000359785 ABCA13Q86UQ4 5058 aa1.84□□□□□ -2.11
PTPN22-201ENST00000359785 KRTAP2-3P0C7H8 128 aa1.83□□□□□ -2.12
PTPN22-201ENST00000359785 KRTAP2-4Q9BYR9 128 aa1.83□□□□□ -2.12
PTPN22-201ENST00000359785 KRTAP2-1Q9BYU5 128 aa1.83□□□□□ -2.12
PTPN22-201ENST00000359785 EPPK1P58107 5090 aaKnown RBP1.83□□□□□ -2.12
PTPN22-201ENST00000359785 KRTAP4-1Q9BYQ7 146 aa1.82□□□□□ -2.12
PTPN22-201ENST00000359785 KRTAP10-10P60014 251 aa1.82□□□□□ -2.12
PTPN22-201ENST00000359785 MT1HP80294 61 aa1.77□□□□□ -2.13
PTPN22-201ENST00000359785 LCE3AQ5TA76 89 aa1.74□□□□□ -2.13
PTPN22-201ENST00000359785 MT1XP80297 61 aa1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms