RNA–Protein interactions for RNA: ENST00000359524.7

RUNX2-201, Transcript of runt related transcription factor 2, humanhuman

TSL 1 (best) BASIC

Gene RUNX2, Length 5,390 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX2-201ENST00000359524 VPS13DQ5THJ4 4388 aa7.87□□□□□ -1.15
RUNX2-201ENST00000359524 KRTAP10-6P60371 365 aaPredicted RBP7.84□□□□□ -1.15
RUNX2-201ENST00000359524 PRKDCP78527 4128 aaKnown RBP7.81□□□□□ -1.16
RUNX2-201ENST00000359524 DNAH3Q8TD57 4116 aa7.81□□□□□ -1.16
RUNX2-201ENST00000359524 CMYA5Q8N3K9 4069 aa7.79□□□□□ -1.16
RUNX2-201ENST00000359524 DNAH11Q96DT5 4516 aa7.79□□□□□ -1.16
RUNX2-201ENST00000359524 DNAH5Q8TE73 4624 aa7.76□□□□□ -1.17
RUNX2-201ENST00000359524 KRTAP23-1A1A580 65 aa7.76□□□□□ -1.17
RUNX2-201ENST00000359524 MT1HL1P0DM35 61 aa7.76□□□□□ -1.17
RUNX2-201ENST00000359524 DNAH17Q9UFH2 4485 aa7.74□□□□□ -1.17
RUNX2-201ENST00000359524 KMT2AQ03164 3969 aa7.64□□□□□ -1.19
RUNX2-201ENST00000359524 KRTAP10-12P60413 245 aa7.64□□□□□ -1.19
RUNX2-201ENST00000359524 KRTAP4-5Q9BYR2 181 aa7.6□□□□□ -1.19
RUNX2-201ENST00000359524 DNAH2Q9P225 4427 aa7.59□□□□□ -1.19
RUNX2-201ENST00000359524 LYSTQ99698 3801 aa7.54□□□□□ -1.2
RUNX2-201ENST00000359524 DYNC1H1Q14204 4646 aaKnown RBP7.54□□□□□ -1.2
RUNX2-201ENST00000359524 LRP1BQ9NZR2 4599 aa7.53□□□□□ -1.2
RUNX2-201ENST00000359524 DYNC2H1Q8NCM8 4307 aaKnown RBP7.52□□□□□ -1.21
RUNX2-201ENST00000359524 KRTAP3-2Q9BYR7 98 aa7.51□□□□□ -1.21
RUNX2-201ENST00000359524 DNAH8Q96JB1 4490 aa7.49□□□□□ -1.21
RUNX2-201ENST00000359524 FAT1Q14517 4588 aa7.47□□□□□ -1.21
RUNX2-201ENST00000359524 DNAH7Q8WXX0 4024 aa7.44□□□□□ -1.22
RUNX2-201ENST00000359524 KRTAP12-3P60328 96 aa7.44□□□□□ -1.22
RUNX2-201ENST00000359524 KRTAP3-3Q9BYR6 98 aa7.43□□□□□ -1.22
RUNX2-201ENST00000359524 FAT2Q9NYQ8 4349 aa7.36□□□□□ -1.23
RUNX2-201ENST00000359524 HECTD4Q9Y4D8 3996 aa7.34□□□□□ -1.23
RUNX2-201ENST00000359524 VPS13BQ7Z7G8 4022 aa7.33□□□□□ -1.24
RUNX2-201ENST00000359524 DNAH6Q9C0G6 4158 aa7.3□□□□□ -1.24
RUNX2-201ENST00000359524 SACSQ9NZJ4 4579 aa7.29□□□□□ -1.24
RUNX2-201ENST00000359524 FRAS1Q86XX4 4008 aa7.29□□□□□ -1.24
RUNX2-201ENST00000359524 CRCT1Q9UGL9 99 aa7.22□□□□□ -1.25
RUNX2-201ENST00000359524 HYDINQ4G0P3 5121 aa7.21□□□□□ -1.26
RUNX2-201ENST00000359524 RYR1P21817 5038 aa7.18□□□□□ -1.26
RUNX2-201ENST00000359524 LCE3AQ5TA76 89 aa7.18□□□□□ -1.26
RUNX2-201ENST00000359524 KIAA1109Q2LD37 5005 aa7.13□□□□□ -1.27
RUNX2-201ENST00000359524 APOBP04114 4563 aaKnown RBP7.11□□□□□ -1.27
RUNX2-201ENST00000359524 RYR2Q92736 4967 aa7.1□□□□□ -1.27
RUNX2-201ENST00000359524 RYR3Q15413 4870 aa7.09□□□□□ -1.27
RUNX2-201ENST00000359524 KRTAP17-1Q9BYP8 105 aa7.06□□□□□ -1.28
RUNX2-201ENST00000359524 PKHD1P08F94 4074 aa7.03□□□□□ -1.28
RUNX2-201ENST00000359524 LRP1Q07954 4544 aaKnown RBP7.01□□□□□ -1.29
RUNX2-201ENST00000359524 KRTAP4-1Q9BYQ7 146 aa6.99□□□□□ -1.29
RUNX2-201ENST00000359524 MYCBP2O75592 4640 aa6.98□□□□□ -1.29
RUNX2-201ENST00000359524 KRTAP8-1Q8IUC2 63 aa6.98□□□□□ -1.29
RUNX2-201ENST00000359524 PKD1P98161 4303 aa6.95□□□□□ -1.3
RUNX2-201ENST00000359524 KRTAP10-5P60370 271 aa6.94□□□□□ -1.3
RUNX2-201ENST00000359524 LORP23490 312 aaPredicted RBP6.94□□□□□ -1.3
RUNX2-201ENST00000359524 KRTAP19-4Q3LI73 84 aa6.94□□□□□ -1.3
RUNX2-201ENST00000359524 KMT2CQ8NEZ4 4911 aaKnown RBP6.85□□□□□ -1.31
RUNX2-201ENST00000359524 HSPG2P98160 4391 aa6.83□□□□□ -1.32
RUNX2-201ENST00000359524 FAT3Q8TDW7 4589 aa6.83□□□□□ -1.32
RUNX2-201ENST00000359524 HERC2O95714 4834 aa6.69□□□□□ -1.34
RUNX2-201ENST00000359524 SPRR2GQ9BYE4 73 aa6.66□□□□□ -1.34
RUNX2-201ENST00000359524 MT1HP80294 61 aa6.63□□□□□ -1.35
RUNX2-201ENST00000359524 LRP2P98164 4655 aa6.61□□□□□ -1.35
RUNX2-201ENST00000359524 KRTAP10-7P60409 375 aaPredicted RBP6.57□□□□□ -1.36
RUNX2-201ENST00000359524 BIRC6Q9NR09 4857 aa6.56□□□□□ -1.36
RUNX2-201ENST00000359524 PKHD1L1Q86WI1 4243 aa6.55□□□□□ -1.36
RUNX2-201ENST00000359524 TNXBP22105 4242 aa6.54□□□□□ -1.36
RUNX2-201ENST00000359524 EPPK1P58107 5090 aaKnown RBP6.51□□□□□ -1.37
RUNX2-201ENST00000359524 MT2AP02795 61 aa6.5□□□□□ -1.37
RUNX2-201ENST00000359524 LPAP08519 4548 aa6.47□□□□□ -1.37
RUNX2-201ENST00000359524 LCE3CQ5T5A8 94 aa6.46□□□□□ -1.38
RUNX2-201ENST00000359524 MT1FP04733 61 aa6.43□□□□□ -1.38
RUNX2-201ENST00000359524 KRTAP19-5Q3LI72 72 aa6.37□□□□□ -1.39
RUNX2-201ENST00000359524 ABCA13Q86UQ4 5058 aa6.36□□□□□ -1.39
RUNX2-201ENST00000359524 SPRR2FQ96RM1 72 aa6.33□□□□□ -1.4
RUNX2-201ENST00000359524 HERC1Q15751 4861 aa6.3□□□□□ -1.4
RUNX2-201ENST00000359524 LCE2CQ5TA81 110 aa6.24□□□□□ -1.41
RUNX2-201ENST00000359524 KRTAP19-1Q8IUB9 90 aa6.23□□□□□ -1.41
RUNX2-201ENST00000359524 PCLOQ9Y6V0 5065 aa6.19□□□□□ -1.42
RUNX2-201ENST00000359524 KRTAP19-2Q3LHN2 52 aa6.17□□□□□ -1.42
RUNX2-201ENST00000359524 KRTAP19-8Q3LI54 63 aa6.17□□□□□ -1.42
RUNX2-201ENST00000359524 KRTAP9-8Q9BYQ0 159 aa6.12□□□□□ -1.43
RUNX2-201ENST00000359524 FLGP20930 4061 aaPredicted RBP6.02□□□□□ -1.45
RUNX2-201ENST00000359524 MUC17Q685J3 4493 aa6.02□□□□□ -1.45
RUNX2-201ENST00000359524 SPRR5A0A1B0GTR4 108 aa5.99□□□□□ -1.45
RUNX2-201ENST00000359524 MT1BP07438 61 aa5.98□□□□□ -1.45
RUNX2-201ENST00000359524 SPRR2EP22531 72 aa5.97□□□□□ -1.45
RUNX2-201ENST00000359524 SPRR2BP35325 72 aa5.97□□□□□ -1.45
RUNX2-201ENST00000359524 SPRR2AP35326 72 aa5.97□□□□□ -1.45
RUNX2-201ENST00000359524 KRTAP12-4P60329 112 aa5.94□□□□□ -1.46
RUNX2-201ENST00000359524 MT1XP80297 61 aa5.94□□□□□ -1.46
RUNX2-201ENST00000359524 KRTAP9-3Q9BYQ3 159 aa5.92□□□□□ -1.46
RUNX2-201ENST00000359524 MT1GP13640 62 aa5.89□□□□□ -1.47
RUNX2-201ENST00000359524 RNF213Q63HN8 5207 aa5.86□□□□□ -1.47
RUNX2-201ENST00000359524 LCE3BQ5TA77 95 aa5.84□□□□□ -1.47
RUNX2-201ENST00000359524 HMCN2Q8NDA2 5059 aa5.84□□□□□ -1.47
RUNX2-201ENST00000359524 LCE2BO14633 110 aa5.84□□□□□ -1.48
RUNX2-201ENST00000359524 SPRR2DP22532 72 aa5.82□□□□□ -1.48
RUNX2-201ENST00000359524 MUC2Q02817 5179 aa5.81□□□□□ -1.48
RUNX2-201ENST00000359524 FAT4Q6V0I7 4981 aa5.81□□□□□ -1.48
RUNX2-201ENST00000359524 LCE3DQ9BYE3 92 aa5.78□□□□□ -1.48
RUNX2-201ENST00000359524 LCE3EQ5T5B0 92 aa5.75□□□□□ -1.49
RUNX2-201ENST00000359524 UBR4Q5T4S7 5183 aa5.72□□□□□ -1.49
RUNX2-201ENST00000359524 KRTAP4-8A0A0G2JLE6 195 aa5.64□□□□□ -1.51
RUNX2-201ENST00000359524 KRTAP4-8Q9BYQ9 185 aa5.64□□□□□ -1.51
RUNX2-201ENST00000359524 MT1LQ93083 61 aa5.57□□□□□ -1.52
RUNX2-201ENST00000359524 LCE2AQ5TA79 106 aaPredicted RBP5.54□□□□□ -1.52
RUNX2-201ENST00000359524 KRTAP19-3Q7Z4W3 81 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 193.3 ms