RNA–Protein interactions for RNA: ENST00000355947.6

TRIM4-203, Transcript of tripartite motif containing 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM4, Length 3,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-203ENST00000355947 S4R3F8 94 aa7.04□□□□□ -1.28
TRIM4-203ENST00000355947 KRTAP10-8P60410 259 aa7.01□□□□□ -1.29
TRIM4-203ENST00000355947 KMT2CQ8NEZ4 4911 aaKnown RBP7□□□□□ -1.29
TRIM4-203ENST00000355947 DYNC1H1Q14204 4646 aaKnown RBP7□□□□□ -1.29
TRIM4-203ENST00000355947 RPS29P62273 56 aaKnown RBP6.99□□□□□ -1.29
TRIM4-203ENST00000355947 KRTAP10-6P60371 365 aaPredicted RBP6.99□□□□□ -1.29
TRIM4-203ENST00000355947 LRP1Q07954 4544 aaKnown RBP6.94□□□□□ -1.3
TRIM4-203ENST00000355947 KRTAP12-2P59991 146 aa6.92□□□□□ -1.3
TRIM4-203ENST00000355947 KRTAP3-3Q9BYR6 98 aa6.92□□□□□ -1.3
TRIM4-203ENST00000355947 KRTAP21-3Q3LHN1 58 aa6.88□□□□□ -1.31
TRIM4-203ENST00000355947 KRTAP3-2Q9BYR7 98 aa6.88□□□□□ -1.31
TRIM4-203ENST00000355947 RYR2Q92736 4967 aa6.86□□□□□ -1.31
TRIM4-203ENST00000355947 XP32Q5T750 250 aa6.85□□□□□ -1.31
TRIM4-203ENST00000355947 APOBP04114 4563 aaKnown RBP6.84□□□□□ -1.31
TRIM4-203ENST00000355947 FAT3Q8TDW7 4589 aa6.82□□□□□ -1.32
TRIM4-203ENST00000355947 Q5VSD8 79 aa6.82□□□□□ -1.32
TRIM4-203ENST00000355947 A0A1B0GVY2 172 aa6.8□□□□□ -1.32
TRIM4-203ENST00000355947 HSPG2P98160 4391 aa6.8□□□□□ -1.32
TRIM4-203ENST00000355947 KRTAP10-4P60372 401 aaPredicted RBP6.79□□□□□ -1.32
TRIM4-203ENST00000355947 M0QZ58 72 aa6.77□□□□□ -1.33
TRIM4-203ENST00000355947 KRTAP12-1P59990 96 aa6.76□□□□□ -1.33
TRIM4-203ENST00000355947 RYR3Q15413 4870 aa6.76□□□□□ -1.33
TRIM4-203ENST00000355947 R4GN34 69 aa6.71□□□□□ -1.33
TRIM4-203ENST00000355947 KRTAP15-1Q3LI76 137 aa6.67□□□□□ -1.34
TRIM4-203ENST00000355947 KIAA1109Q2LD37 5005 aa6.67□□□□□ -1.34
TRIM4-203ENST00000355947 PKHD1L1Q86WI1 4243 aa6.66□□□□□ -1.34
TRIM4-203ENST00000355947 LRP2P98164 4655 aa6.64□□□□□ -1.35
TRIM4-203ENST00000355947 LPAP08519 4548 aa6.63□□□□□ -1.35
TRIM4-203ENST00000355947 KRTAP17-1Q9BYP8 105 aa6.62□□□□□ -1.35
TRIM4-203ENST00000355947 EPPK1P58107 5090 aaKnown RBP6.54□□□□□ -1.36
TRIM4-203ENST00000355947 RYR1P21817 5038 aa6.54□□□□□ -1.36
TRIM4-203ENST00000355947 CAMK2N1Q7Z7J9 78 aa6.53□□□□□ -1.36
TRIM4-203ENST00000355947 TNXBP22105 4242 aa6.51□□□□□ -1.37
TRIM4-203ENST00000355947 PLAC4Q8WY50 150 aa6.49□□□□□ -1.37
TRIM4-203ENST00000355947 LORP23490 312 aaPredicted RBP6.48□□□□□ -1.37
TRIM4-203ENST00000355947 LUZP6Q538Z0 58 aa6.42□□□□□ -1.38
TRIM4-203ENST00000355947 MT1HL1P0DM35 61 aa6.41□□□□□ -1.38
TRIM4-203ENST00000355947 ABCA13Q86UQ4 5058 aa6.37□□□□□ -1.39
TRIM4-203ENST00000355947 KRTAP4-5Q9BYR2 181 aa6.35□□□□□ -1.39
TRIM4-203ENST00000355947 J3QL48 77 aa6.28□□□□□ -1.4
TRIM4-203ENST00000355947 A0A0A0MQY5 61 aa6.27□□□□□ -1.41
TRIM4-203ENST00000355947 SEC61BP60468 96 aaKnown RBP6.25□□□□□ -1.41
TRIM4-203ENST00000355947 MUC2Q02817 5179 aa6.22□□□□□ -1.41
TRIM4-203ENST00000355947 KRTAP4-1Q9BYQ7 146 aa6.18□□□□□ -1.42
TRIM4-203ENST00000355947 HERC2O95714 4834 aa6.15□□□□□ -1.42
TRIM4-203ENST00000355947 TNP1P09430 55 aa6.07□□□□□ -1.44
TRIM4-203ENST00000355947 PP632Q6XCG6 107 aa6.05□□□□□ -1.44
TRIM4-203ENST00000355947 M0R2T5 61 aa6□□□□□ -1.45
TRIM4-203ENST00000355947 HERC1Q15751 4861 aa5.99□□□□□ -1.45
TRIM4-203ENST00000355947 PCLOQ9Y6V0 5065 aa5.93□□□□□ -1.46
TRIM4-203ENST00000355947 FAT4Q6V0I7 4981 aa5.91□□□□□ -1.46
TRIM4-203ENST00000355947 BIRC6Q9NR09 4857 aa5.91□□□□□ -1.46
TRIM4-203ENST00000355947 MUC17Q685J3 4493 aa5.88□□□□□ -1.47
TRIM4-203ENST00000355947 RNF213Q63HN8 5207 aa5.77□□□□□ -1.49
TRIM4-203ENST00000355947 KRTAP19-2Q3LHN2 52 aa5.73□□□□□ -1.49
TRIM4-203ENST00000355947 LCE3AQ5TA76 89 aa5.72□□□□□ -1.49
TRIM4-203ENST00000355947 HMCN2Q8NDA2 5059 aa5.72□□□□□ -1.49
TRIM4-203ENST00000355947 KRTAP10-10P60014 251 aa5.7□□□□□ -1.5
TRIM4-203ENST00000355947 UBR4Q5T4S7 5183 aa5.69□□□□□ -1.5
TRIM4-203ENST00000355947 FLGP20930 4061 aaPredicted RBP5.63□□□□□ -1.51
TRIM4-203ENST00000355947 KRTAP19-1Q8IUB9 90 aa5.54□□□□□ -1.52
TRIM4-203ENST00000355947 SPRR5A0A1B0GTR4 108 aa5.53□□□□□ -1.52
TRIM4-203ENST00000355947 KRTAP23-1A1A580 65 aa5.46□□□□□ -1.53
TRIM4-203ENST00000355947 MT1FP04733 61 aa5.44□□□□□ -1.54
TRIM4-203ENST00000355947 LCE2CQ5TA81 110 aa5.44□□□□□ -1.54
TRIM4-203ENST00000355947 SPRR2GQ9BYE4 73 aa5.44□□□□□ -1.54
TRIM4-203ENST00000355947 KRTAP12-3P60328 96 aa5.41□□□□□ -1.54
TRIM4-203ENST00000355947 MT2AP02795 61 aa5.38□□□□□ -1.55
TRIM4-203ENST00000355947 KRTAP10-12P60413 245 aa5.38□□□□□ -1.55
TRIM4-203ENST00000355947 MT1HP80294 61 aa5.37□□□□□ -1.55
TRIM4-203ENST00000355947 PRO2289Q9P1D8 64 aa5.37□□□□□ -1.55
TRIM4-203ENST00000355947 KMT2DO14686 5537 aa5.29□□□□□ -1.56
TRIM4-203ENST00000355947 KRTAP10-7P60409 375 aaPredicted RBP5.29□□□□□ -1.56
TRIM4-203ENST00000355947 KRTAP8-1Q8IUC2 63 aa5.29□□□□□ -1.56
TRIM4-203ENST00000355947 USH2AO75445 5202 aa5.27□□□□□ -1.57
TRIM4-203ENST00000355947 KRTAP10-5P60370 271 aa5.24□□□□□ -1.57
TRIM4-203ENST00000355947 MT1XP80297 61 aa5.24□□□□□ -1.57
TRIM4-203ENST00000355947 INE1O15225 51 aa5.22□□□□□ -1.57
TRIM4-203ENST00000355947 KRTAP9-8Q9BYQ0 159 aa5.21□□□□□ -1.58
TRIM4-203ENST00000355947 MT1BP07438 61 aa5.21□□□□□ -1.58
TRIM4-203ENST00000355947 KRTAP19-5Q3LI72 72 aa5.12□□□□□ -1.59
TRIM4-203ENST00000355947 KRTAP19-8Q3LI54 63 aa5.1□□□□□ -1.59
TRIM4-203ENST00000355947 KRTAP4-8A0A0G2JLE6 195 aa5.05□□□□□ -1.6
TRIM4-203ENST00000355947 KRTAP4-8Q9BYQ9 185 aa5.05□□□□□ -1.6
TRIM4-203ENST00000355947 FSIP2Q5CZC0 6907 aa5.03□□□□□ -1.6
TRIM4-203ENST00000355947 KRTAP4-7Q9BYR0 210 aa5.01□□□□□ -1.61
TRIM4-203ENST00000355947 LCE3CQ5T5A8 94 aa4.99□□□□□ -1.61
TRIM4-203ENST00000355947 KRTAP9-3Q9BYQ3 159 aa4.95□□□□□ -1.62
TRIM4-203ENST00000355947 KRTAP9-6A8MVA2 160 aa4.88□□□□□ -1.63
TRIM4-203ENST00000355947 CRCT1Q9UGL9 99 aa4.87□□□□□ -1.63
TRIM4-203ENST00000355947 LCE2BO14633 110 aa4.85□□□□□ -1.63
TRIM4-203ENST00000355947 DSTQ03001 7570 aaKnown RBP4.79□□□□□ -1.64
TRIM4-203ENST00000355947 LCE2AQ5TA79 106 aaPredicted RBP4.76□□□□□ -1.65
TRIM4-203ENST00000355947 OBSCNQ5VST9 7968 aa4.73□□□□□ -1.65
TRIM4-203ENST00000355947 SYNE1Q8NF91 8797 aaKnown RBP4.73□□□□□ -1.65
TRIM4-203ENST00000355947 FCGBPQ9Y6R7 5405 aaPredicted RBP4.73□□□□□ -1.65
TRIM4-203ENST00000355947 KRTAP19-7Q3SYF9 63 aa4.64□□□□□ -1.67
TRIM4-203ENST00000355947 LOC100996750A0A140TA64 210 aa4.64□□□□□ -1.67
TRIM4-203ENST00000355947 LCE2DQ5TA82 110 aaPredicted RBP4.64□□□□□ -1.67
TRIM4-203ENST00000355947 KRTAP4-3Q9BYR4 195 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 173.3 ms