RNA–Protein interactions for RNA: ENST00000354192.7

APP-203, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-203ENST00000354192 COX6B2Q6YFQ2 88 aa9.5□□□□□ -0.89
APP-203ENST00000354192 TNXBP22105 4242 aa9.5□□□□□ -0.89
APP-203ENST00000354192 LRP2P98164 4655 aa9.44□□□□□ -0.9
APP-203ENST00000354192 A0A1B0GU33 70 aa9.44□□□□□ -0.9
APP-203ENST00000354192 RPL37P61927 97 aaKnown RBP9.43□□□□□ -0.9
APP-203ENST00000354192 KRTAP4-5Q9BYR2 181 aa9.43□□□□□ -0.9
APP-203ENST00000354192 LPAP08519 4548 aa9.41□□□□□ -0.9
APP-203ENST00000354192 MT1HL1P0DM35 61 aa9.4□□□□□ -0.9
APP-203ENST00000354192 ABCA13Q86UQ4 5058 aa9.39□□□□□ -0.91
APP-203ENST00000354192 A0A0D9SG42 100 aa9.38□□□□□ -0.91
APP-203ENST00000354192 H0YAA0 97 aa9.36□□□□□ -0.91
APP-203ENST00000354192 RBM12B-AS1Q9P1G2 102 aa9.34□□□□□ -0.91
APP-203ENST00000354192 H1FX-AS1Q4G0G2 97 aa9.3□□□□□ -0.92
APP-203ENST00000354192 S4R3F8 94 aa9.29□□□□□ -0.92
APP-203ENST00000354192 CRIPTQ9P021 101 aa9.28□□□□□ -0.92
APP-203ENST00000354192 J3QL48 77 aa9.25□□□□□ -0.93
APP-203ENST00000354192 HERC2O95714 4834 aa9.24□□□□□ -0.93
APP-203ENST00000354192 CSAG1Q6PB30 78 aa9.18□□□□□ -0.94
APP-203ENST00000354192 KRTAP3-3Q9BYR6 98 aa9.18□□□□□ -0.94
APP-203ENST00000354192 P0C880 135 aa9.16□□□□□ -0.94
APP-203ENST00000354192 K7ERS5 55 aa9.13□□□□□ -0.95
APP-203ENST00000354192 KRTAP13-4Q3LI77 160 aa9.09□□□□□ -0.95
APP-203ENST00000354192 LINC01554Q52M75 96 aa9.07□□□□□ -0.96
APP-203ENST00000354192 KRTAP10-6P60371 365 aaPredicted RBP9.06□□□□□ -0.96
APP-203ENST00000354192 TPRXLQ17RH7 258 aa9.06□□□□□ -0.96
APP-203ENST00000354192 HERC1Q15751 4861 aa9.05□□□□□ -0.96
APP-203ENST00000354192 MUC2Q02817 5179 aa9.05□□□□□ -0.96
APP-203ENST00000354192 SPINT4Q6UDR6 99 aa9.04□□□□□ -0.96
APP-203ENST00000354192 PCLOQ9Y6V0 5065 aa8.99□□□□□ -0.97
APP-203ENST00000354192 KRTAP3-2Q9BYR7 98 aa8.98□□□□□ -0.97
APP-203ENST00000354192 BIRC6Q9NR09 4857 aa8.95□□□□□ -0.98
APP-203ENST00000354192 SEC61BP60468 96 aaKnown RBP8.88□□□□□ -0.99
APP-203ENST00000354192 KRTAP4-1Q9BYQ7 146 aa8.83□□□□□ -1
APP-203ENST00000354192 M0QZ58 72 aa8.81□□□□□ -1
APP-203ENST00000354192 KRTAP12-2P59991 146 aa8.79□□□□□ -1
APP-203ENST00000354192 C10orf95Q9H7T3 257 aa8.77□□□□□ -1.01
APP-203ENST00000354192 R4GN34 69 aa8.77□□□□□ -1.01
APP-203ENST00000354192 ROMO1P60602 79 aa8.77□□□□□ -1.01
APP-203ENST00000354192 KRTAP25-1Q3LHN0 102 aa8.74□□□□□ -1.01
APP-203ENST00000354192 RNF213Q63HN8 5207 aa8.71□□□□□ -1.02
APP-203ENST00000354192 LORP23490 312 aaPredicted RBP8.65□□□□□ -1.02
APP-203ENST00000354192 KRTAP12-1P59990 96 aa8.64□□□□□ -1.03
APP-203ENST00000354192 UBR4Q5T4S7 5183 aa8.59□□□□□ -1.03
APP-203ENST00000354192 FAT4Q6V0I7 4981 aa8.58□□□□□ -1.04
APP-203ENST00000354192 MUC17Q685J3 4493 aa8.57□□□□□ -1.04
APP-203ENST00000354192 HMCN2Q8NDA2 5059 aa8.5□□□□□ -1.05
APP-203ENST00000354192 M0R2T5 61 aa8.42□□□□□ -1.06
APP-203ENST00000354192 CAMK2N1Q7Z7J9 78 aa8.41□□□□□ -1.06
APP-203ENST00000354192 KRTAP19-2Q3LHN2 52 aa8.29□□□□□ -1.08
APP-203ENST00000354192 FLGP20930 4061 aaPredicted RBP8.21□□□□□ -1.1
APP-203ENST00000354192 H3BS24 57 aa8.02□□□□□ -1.13
APP-203ENST00000354192 KRTAP10-10P60014 251 aa8.01□□□□□ -1.13
APP-203ENST00000354192 LCE2CQ5TA81 110 aa8□□□□□ -1.13
APP-203ENST00000354192 NDUFAF8A1L188 74 aa7.94□□□□□ -1.14
APP-203ENST00000354192 PLAC4Q8WY50 150 aa7.92□□□□□ -1.14
APP-203ENST00000354192 MT1HP80294 61 aa7.91□□□□□ -1.14
APP-203ENST00000354192 TNP1P09430 55 aa7.83□□□□□ -1.16
APP-203ENST00000354192 KRTAP15-1Q3LI76 137 aa7.81□□□□□ -1.16
APP-203ENST00000354192 MT1FP04733 61 aa7.79□□□□□ -1.16
APP-203ENST00000354192 KRTAP19-1Q8IUB9 90 aa7.77□□□□□ -1.17
APP-203ENST00000354192 MT2AP02795 61 aa7.75□□□□□ -1.17
APP-203ENST00000354192 SPRR2GQ9BYE4 73 aa7.65□□□□□ -1.18
APP-203ENST00000354192 USH2AO75445 5202 aa7.63□□□□□ -1.19
APP-203ENST00000354192 KRTAP9-8Q9BYQ0 159 aa7.63□□□□□ -1.19
APP-203ENST00000354192 PP632Q6XCG6 107 aa7.62□□□□□ -1.19
APP-203ENST00000354192 FSIP2Q5CZC0 6907 aa7.59□□□□□ -1.19
APP-203ENST00000354192 LUZP6Q538Z0 58 aa7.51□□□□□ -1.21
APP-203ENST00000354192 LCE3AQ5TA76 89 aa7.48□□□□□ -1.21
APP-203ENST00000354192 MT1BP07438 61 aa7.38□□□□□ -1.23
APP-203ENST00000354192 KMT2DO14686 5537 aa7.34□□□□□ -1.23
APP-203ENST00000354192 MT1XP80297 61 aa7.3□□□□□ -1.24
APP-203ENST00000354192 KRTAP10-5P60370 271 aa7.29□□□□□ -1.24
APP-203ENST00000354192 KRTAP9-3Q9BYQ3 159 aa7.29□□□□□ -1.24
APP-203ENST00000354192 KRTAP19-8Q3LI54 63 aa7.28□□□□□ -1.24
APP-203ENST00000354192 KRTAP10-7P60409 375 aaPredicted RBP7.24□□□□□ -1.25
APP-203ENST00000354192 KRTAP10-12P60413 245 aa7.21□□□□□ -1.25
APP-203ENST00000354192 LCE2BO14633 110 aa7.16□□□□□ -1.26
APP-203ENST00000354192 KRTAP23-1A1A580 65 aa7.12□□□□□ -1.27
APP-203ENST00000354192 PRO2289Q9P1D8 64 aa7.12□□□□□ -1.27
APP-203ENST00000354192 KRTAP12-3P60328 96 aa7.09□□□□□ -1.27
APP-203ENST00000354192 LCE2AQ5TA79 106 aaPredicted RBP7.08□□□□□ -1.28
APP-203ENST00000354192 KRTAP8-1Q8IUC2 63 aa7□□□□□ -1.29
APP-203ENST00000354192 KRTAP4-8A0A0G2JLE6 195 aa6.99□□□□□ -1.29
APP-203ENST00000354192 KRTAP4-8Q9BYQ9 185 aa6.99□□□□□ -1.29
APP-203ENST00000354192 KRTAP19-5Q3LI72 72 aa6.89□□□□□ -1.31
APP-203ENST00000354192 SSPOA2VEC9 5147 aa6.89□□□□□ -1.31
APP-203ENST00000354192 A0A0A0MQY5 61 aa6.88□□□□□ -1.31
APP-203ENST00000354192 SPRR5A0A1B0GTR4 108 aa6.85□□□□□ -1.31
APP-203ENST00000354192 KRTAP4-7Q9BYR0 210 aa6.65□□□□□ -1.34
APP-203ENST00000354192 DSTQ03001 7570 aaKnown RBP6.57□□□□□ -1.36
APP-203ENST00000354192 LCE3CQ5T5A8 94 aa6.56□□□□□ -1.36
APP-203ENST00000354192 MUC12Q9UKN1 5478 aa6.54□□□□□ -1.36
APP-203ENST00000354192 FCGBPQ9Y6R7 5405 aaPredicted RBP6.52□□□□□ -1.37
APP-203ENST00000354192 KRTAP19-7Q3SYF9 63 aa6.48□□□□□ -1.37
APP-203ENST00000354192 MACF1Q9UPN3 7388 aaKnown RBP6.39□□□□□ -1.39
APP-203ENST00000354192 SYNE2Q8WXH0 6885 aaKnown RBP6.39□□□□□ -1.39
APP-203ENST00000354192 KRTAP9-6A8MVA2 160 aa6.38□□□□□ -1.39
APP-203ENST00000354192 CRCT1Q9UGL9 99 aa6.37□□□□□ -1.39
APP-203ENST00000354192 MT1EP04732 61 aa6.31□□□□□ -1.4
APP-203ENST00000354192 MT1LQ93083 61 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms