RNA–Protein interactions for RNA: ENST00000353855.6

DNMT3B-204, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 5 BASIC

Gene DNMT3B, Length 4,237 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-204ENST00000353855 FRAS1Q86XX4 4008 aa6.77□□□□□ -1.33
DNMT3B-204ENST00000353855 DNHD1Q96M86 4753 aa6.76□□□□□ -1.33
DNMT3B-204ENST00000353855 STARD9Q9P2P6 4700 aa6.74□□□□□ -1.33
DNMT3B-204ENST00000353855 VPS13DQ5THJ4 4388 aa6.73□□□□□ -1.33
DNMT3B-204ENST00000353855 LRP1BQ9NZR2 4599 aa6.69□□□□□ -1.34
DNMT3B-204ENST00000353855 KRTAP10-4P60372 401 aaPredicted RBP6.69□□□□□ -1.34
DNMT3B-204ENST00000353855 DNAH17Q9UFH2 4485 aa6.69□□□□□ -1.34
DNMT3B-204ENST00000353855 DNAH2Q9P225 4427 aa6.66□□□□□ -1.34
DNMT3B-204ENST00000353855 DNAH5Q8TE73 4624 aa6.64□□□□□ -1.35
DNMT3B-204ENST00000353855 KMT2AQ03164 3969 aa6.63□□□□□ -1.35
DNMT3B-204ENST00000353855 PRKDCP78527 4128 aaKnown RBP6.61□□□□□ -1.35
DNMT3B-204ENST00000353855 DNAH3Q8TD57 4116 aa6.6□□□□□ -1.35
DNMT3B-204ENST00000353855 FAT1Q14517 4588 aa6.58□□□□□ -1.36
DNMT3B-204ENST00000353855 CMYA5Q8N3K9 4069 aa6.55□□□□□ -1.36
DNMT3B-204ENST00000353855 DNAH7Q8WXX0 4024 aa6.54□□□□□ -1.36
DNMT3B-204ENST00000353855 MT1HL1P0DM35 61 aa6.5□□□□□ -1.37
DNMT3B-204ENST00000353855 MYCBP2O75592 4640 aa6.5□□□□□ -1.37
DNMT3B-204ENST00000353855 LORP23490 312 aaPredicted RBP6.48□□□□□ -1.37
DNMT3B-204ENST00000353855 VPS13BQ7Z7G8 4022 aa6.47□□□□□ -1.37
DNMT3B-204ENST00000353855 DNAH6Q9C0G6 4158 aa6.45□□□□□ -1.38
DNMT3B-204ENST00000353855 HECTD4Q9Y4D8 3996 aa6.44□□□□□ -1.38
DNMT3B-204ENST00000353855 DYNC1H1Q14204 4646 aaKnown RBP6.42□□□□□ -1.38
DNMT3B-204ENST00000353855 DYNC2H1Q8NCM8 4307 aaKnown RBP6.38□□□□□ -1.39
DNMT3B-204ENST00000353855 APOBP04114 4563 aaKnown RBP6.33□□□□□ -1.4
DNMT3B-204ENST00000353855 KRTAP10-10P60014 251 aa6.31□□□□□ -1.4
DNMT3B-204ENST00000353855 SACSQ9NZJ4 4579 aa6.28□□□□□ -1.4
DNMT3B-204ENST00000353855 KRTAP4-5Q9BYR2 181 aa6.24□□□□□ -1.41
DNMT3B-204ENST00000353855 FAT2Q9NYQ8 4349 aa6.19□□□□□ -1.42
DNMT3B-204ENST00000353855 LRP1Q07954 4544 aaKnown RBP6.19□□□□□ -1.42
DNMT3B-204ENST00000353855 PRO2289Q9P1D8 64 aa6.17□□□□□ -1.42
DNMT3B-204ENST00000353855 FAT3Q8TDW7 4589 aa6.15□□□□□ -1.42
DNMT3B-204ENST00000353855 HYDINQ4G0P3 5121 aa6.14□□□□□ -1.43
DNMT3B-204ENST00000353855 RYR1P21817 5038 aa6.1□□□□□ -1.43
DNMT3B-204ENST00000353855 INE1O15225 51 aa6.08□□□□□ -1.44
DNMT3B-204ENST00000353855 PKHD1P08F94 4074 aa6.08□□□□□ -1.44
DNMT3B-204ENST00000353855 KIAA1109Q2LD37 5005 aa6.08□□□□□ -1.44
DNMT3B-204ENST00000353855 LCE3AQ5TA76 89 aa6.05□□□□□ -1.44
DNMT3B-204ENST00000353855 KRTAP4-1Q9BYQ7 146 aa6□□□□□ -1.45
DNMT3B-204ENST00000353855 LRP2P98164 4655 aa5.99□□□□□ -1.45
DNMT3B-204ENST00000353855 KRTAP23-1A1A580 65 aa5.97□□□□□ -1.45
DNMT3B-204ENST00000353855 KRTAP17-1Q9BYP8 105 aa5.96□□□□□ -1.46
DNMT3B-204ENST00000353855 RYR3Q15413 4870 aa5.94□□□□□ -1.46
DNMT3B-204ENST00000353855 PKD1P98161 4303 aa5.92□□□□□ -1.46
DNMT3B-204ENST00000353855 KRTAP12-3P60328 96 aa5.88□□□□□ -1.47
DNMT3B-204ENST00000353855 HSPG2P98160 4391 aa5.87□□□□□ -1.47
DNMT3B-204ENST00000353855 KRTAP10-12P60413 245 aa5.86□□□□□ -1.47
DNMT3B-204ENST00000353855 RYR2Q92736 4967 aa5.86□□□□□ -1.47
DNMT3B-204ENST00000353855 KMT2CQ8NEZ4 4911 aaKnown RBP5.8□□□□□ -1.48
DNMT3B-204ENST00000353855 LPAP08519 4548 aa5.68□□□□□ -1.5
DNMT3B-204ENST00000353855 PKHD1L1Q86WI1 4243 aa5.65□□□□□ -1.51
DNMT3B-204ENST00000353855 SPRR5A0A1B0GTR4 108 aa5.64□□□□□ -1.51
DNMT3B-204ENST00000353855 HERC2O95714 4834 aa5.6□□□□□ -1.51
DNMT3B-204ENST00000353855 TNXBP22105 4242 aa5.58□□□□□ -1.52
DNMT3B-204ENST00000353855 SPRR2GQ9BYE4 73 aa5.58□□□□□ -1.52
DNMT3B-204ENST00000353855 KRTAP8-1Q8IUC2 63 aa5.53□□□□□ -1.52
DNMT3B-204ENST00000353855 PCLOQ9Y6V0 5065 aa5.53□□□□□ -1.52
DNMT3B-204ENST00000353855 MT1HP80294 61 aa5.5□□□□□ -1.53
DNMT3B-204ENST00000353855 EPPK1P58107 5090 aaKnown RBP5.49□□□□□ -1.53
DNMT3B-204ENST00000353855 MT2AP02795 61 aa5.48□□□□□ -1.53
DNMT3B-204ENST00000353855 KRTAP19-1Q8IUB9 90 aa5.48□□□□□ -1.53
DNMT3B-204ENST00000353855 CRCT1Q9UGL9 99 aa5.47□□□□□ -1.53
DNMT3B-204ENST00000353855 MT1FP04733 61 aa5.45□□□□□ -1.54
DNMT3B-204ENST00000353855 KRTAP19-2Q3LHN2 52 aa5.35□□□□□ -1.55
DNMT3B-204ENST00000353855 KRTAP19-5Q3LI72 72 aa5.34□□□□□ -1.55
DNMT3B-204ENST00000353855 BIRC6Q9NR09 4857 aa5.33□□□□□ -1.56
DNMT3B-204ENST00000353855 KRTAP10-7P60409 375 aaPredicted RBP5.33□□□□□ -1.56
DNMT3B-204ENST00000353855 LCE3CQ5T5A8 94 aa5.31□□□□□ -1.56
DNMT3B-204ENST00000353855 FSIP2Q5CZC0 6907 aa5.3□□□□□ -1.56
DNMT3B-204ENST00000353855 ABCA13Q86UQ4 5058 aa5.29□□□□□ -1.56
DNMT3B-204ENST00000353855 KRTAP10-5P60370 271 aa5.28□□□□□ -1.56
DNMT3B-204ENST00000353855 LCE2CQ5TA81 110 aa5.27□□□□□ -1.57
DNMT3B-204ENST00000353855 MUC17Q685J3 4493 aa5.27□□□□□ -1.57
DNMT3B-204ENST00000353855 MUC2Q02817 5179 aa5.27□□□□□ -1.57
DNMT3B-204ENST00000353855 MT1XP80297 61 aa5.24□□□□□ -1.57
DNMT3B-204ENST00000353855 HERC1Q15751 4861 aa5.24□□□□□ -1.57
DNMT3B-204ENST00000353855 RNF213Q63HN8 5207 aa5.22□□□□□ -1.57
DNMT3B-204ENST00000353855 KRTAP19-8Q3LI54 63 aa5.2□□□□□ -1.58
DNMT3B-204ENST00000353855 FLGP20930 4061 aaPredicted RBP5.18□□□□□ -1.58
DNMT3B-204ENST00000353855 KRTAP9-8Q9BYQ0 159 aa5.16□□□□□ -1.58
DNMT3B-204ENST00000353855 MT1BP07438 61 aa5.16□□□□□ -1.58
DNMT3B-204ENST00000353855 UBR4Q5T4S7 5183 aa5.11□□□□□ -1.59
DNMT3B-204ENST00000353855 FAT4Q6V0I7 4981 aa5.09□□□□□ -1.59
DNMT3B-204ENST00000353855 KRTAP4-8A0A0G2JLE6 195 aa5.04□□□□□ -1.6
DNMT3B-204ENST00000353855 KRTAP4-8Q9BYQ9 185 aa5.04□□□□□ -1.6
DNMT3B-204ENST00000353855 KRTAP4-7Q9BYR0 210 aa4.99□□□□□ -1.61
DNMT3B-204ENST00000353855 HMCN2Q8NDA2 5059 aa4.98□□□□□ -1.61
DNMT3B-204ENST00000353855 KRTAP9-3Q9BYQ3 159 aa4.97□□□□□ -1.61
DNMT3B-204ENST00000353855 KRTAP12-4P60329 112 aa4.92□□□□□ -1.62
DNMT3B-204ENST00000353855 SYNE1Q8NF91 8797 aaKnown RBP4.87□□□□□ -1.63
DNMT3B-204ENST00000353855 MT1GP13640 62 aa4.79□□□□□ -1.64
DNMT3B-204ENST00000353855 LCE2BO14633 110 aa4.79□□□□□ -1.64
DNMT3B-204ENST00000353855 OBSCNQ5VST9 7968 aa4.74□□□□□ -1.65
DNMT3B-204ENST00000353855 LCE3BQ5TA77 95 aa4.74□□□□□ -1.65
DNMT3B-204ENST00000353855 KRTAP9-6A8MVA2 160 aa4.7□□□□□ -1.66
DNMT3B-204ENST00000353855 KRTAP19-4Q3LI73 84 aa4.68□□□□□ -1.66
DNMT3B-204ENST00000353855 KMT2DO14686 5537 aa4.66□□□□□ -1.66
DNMT3B-204ENST00000353855 MT1LQ93083 61 aa4.65□□□□□ -1.66
DNMT3B-204ENST00000353855 LOC100996750A0A140TA64 210 aa4.62□□□□□ -1.67
DNMT3B-204ENST00000353855 KRTAP2-3P0C7H8 128 aa4.61□□□□□ -1.67
DNMT3B-204ENST00000353855 SPRR2FQ96RM1 72 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms