RNA–Protein interactions for RNA: ENST00000349995.9

COG3-201, Transcript of component of oligomeric golgi complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COG3, Length 4,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COG3-201ENST00000349995 KRTAP10-4P60372 401 aaPredicted RBP7.28□□□□□ -1.24
COG3-201ENST00000349995 KMT2AQ03164 3969 aa7.27□□□□□ -1.24
COG3-201ENST00000349995 FAT1Q14517 4588 aa7.27□□□□□ -1.25
COG3-201ENST00000349995 KRTAP3-2Q9BYR7 98 aa7.25□□□□□ -1.25
COG3-201ENST00000349995 LYSTQ99698 3801 aa7.25□□□□□ -1.25
COG3-201ENST00000349995 LRP1BQ9NZR2 4599 aa7.21□□□□□ -1.25
COG3-201ENST00000349995 DNAH17Q9UFH2 4485 aa7.21□□□□□ -1.25
COG3-201ENST00000349995 MT1HL1P0DM35 61 aa7.18□□□□□ -1.26
COG3-201ENST00000349995 CMYA5Q8N3K9 4069 aa7.16□□□□□ -1.26
COG3-201ENST00000349995 DNAH8Q96JB1 4490 aa7.16□□□□□ -1.26
COG3-201ENST00000349995 DNAH2Q9P225 4427 aa7.16□□□□□ -1.26
COG3-201ENST00000349995 KRTAP3-3Q9BYR6 98 aa7.15□□□□□ -1.26
COG3-201ENST00000349995 DNAH3Q8TD57 4116 aa7.14□□□□□ -1.27
COG3-201ENST00000349995 DYNC1H1Q14204 4646 aaKnown RBP7.13□□□□□ -1.27
COG3-201ENST00000349995 KRTAP4-5Q9BYR2 181 aa7.12□□□□□ -1.27
COG3-201ENST00000349995 PRO2289Q9P1D8 64 aa7.1□□□□□ -1.27
COG3-201ENST00000349995 DNAH7Q8WXX0 4024 aa7.07□□□□□ -1.28
COG3-201ENST00000349995 ALMS1Q8TCU4 4167 aa7.06□□□□□ -1.28
COG3-201ENST00000349995 DYNC2H1Q8NCM8 4307 aaKnown RBP6.99□□□□□ -1.29
COG3-201ENST00000349995 INE1O15225 51 aa6.98□□□□□ -1.29
COG3-201ENST00000349995 DNAH6Q9C0G6 4158 aa6.97□□□□□ -1.29
COG3-201ENST00000349995 MYCBP2O75592 4640 aa6.96□□□□□ -1.3
COG3-201ENST00000349995 FRAS1Q86XX4 4008 aa6.95□□□□□ -1.3
COG3-201ENST00000349995 VPS13BQ7Z7G8 4022 aa6.94□□□□□ -1.3
COG3-201ENST00000349995 KIAA1109Q2LD37 5005 aa6.94□□□□□ -1.3
COG3-201ENST00000349995 RYR1P21817 5038 aa6.93□□□□□ -1.3
COG3-201ENST00000349995 KRTAP10-10P60014 251 aa6.89□□□□□ -1.31
COG3-201ENST00000349995 SACSQ9NZJ4 4579 aa6.88□□□□□ -1.31
COG3-201ENST00000349995 HECTD4Q9Y4D8 3996 aa6.86□□□□□ -1.31
COG3-201ENST00000349995 HYDINQ4G0P3 5121 aa6.85□□□□□ -1.31
COG3-201ENST00000349995 FAT2Q9NYQ8 4349 aa6.83□□□□□ -1.32
COG3-201ENST00000349995 LRP1Q07954 4544 aaKnown RBP6.82□□□□□ -1.32
COG3-201ENST00000349995 RYR3Q15413 4870 aa6.8□□□□□ -1.32
COG3-201ENST00000349995 APOBP04114 4563 aaKnown RBP6.8□□□□□ -1.32
COG3-201ENST00000349995 FAT3Q8TDW7 4589 aa6.77□□□□□ -1.33
COG3-201ENST00000349995 PKHD1P08F94 4074 aa6.76□□□□□ -1.33
COG3-201ENST00000349995 KRTAP17-1Q9BYP8 105 aa6.67□□□□□ -1.34
COG3-201ENST00000349995 LORP23490 312 aaPredicted RBP6.65□□□□□ -1.34
COG3-201ENST00000349995 KMT2CQ8NEZ4 4911 aaKnown RBP6.62□□□□□ -1.35
COG3-201ENST00000349995 RYR2Q92736 4967 aa6.61□□□□□ -1.35
COG3-201ENST00000349995 KRTAP4-1Q9BYQ7 146 aa6.55□□□□□ -1.36
COG3-201ENST00000349995 PKD1P98161 4303 aa6.48□□□□□ -1.37
COG3-201ENST00000349995 LRP2P98164 4655 aa6.48□□□□□ -1.37
COG3-201ENST00000349995 LCE3AQ5TA76 89 aa6.44□□□□□ -1.38
COG3-201ENST00000349995 HERC2O95714 4834 aa6.41□□□□□ -1.38
COG3-201ENST00000349995 HSPG2P98160 4391 aa6.39□□□□□ -1.39
COG3-201ENST00000349995 KRTAP23-1A1A580 65 aa6.39□□□□□ -1.39
COG3-201ENST00000349995 KRTAP12-3P60328 96 aa6.35□□□□□ -1.39
COG3-201ENST00000349995 KRTAP10-12P60413 245 aa6.29□□□□□ -1.4
COG3-201ENST00000349995 LPAP08519 4548 aa6.23□□□□□ -1.41
COG3-201ENST00000349995 EPPK1P58107 5090 aaKnown RBP6.22□□□□□ -1.41
COG3-201ENST00000349995 MT1HP80294 61 aa6.1□□□□□ -1.43
COG3-201ENST00000349995 PKHD1L1Q86WI1 4243 aa6.09□□□□□ -1.43
COG3-201ENST00000349995 CRCT1Q9UGL9 99 aa6.07□□□□□ -1.44
COG3-201ENST00000349995 ABCA13Q86UQ4 5058 aa6.06□□□□□ -1.44
COG3-201ENST00000349995 BIRC6Q9NR09 4857 aa6.06□□□□□ -1.44
COG3-201ENST00000349995 TNXBP22105 4242 aa6.06□□□□□ -1.44
COG3-201ENST00000349995 MT2AP02795 61 aa6.02□□□□□ -1.45
COG3-201ENST00000349995 MT1FP04733 61 aa5.98□□□□□ -1.45
COG3-201ENST00000349995 KRTAP10-5P60370 271 aa5.93□□□□□ -1.46
COG3-201ENST00000349995 SPRR2GQ9BYE4 73 aa5.93□□□□□ -1.46
COG3-201ENST00000349995 PCLOQ9Y6V0 5065 aa5.93□□□□□ -1.46
COG3-201ENST00000349995 SPRR5A0A1B0GTR4 108 aa5.92□□□□□ -1.46
COG3-201ENST00000349995 HERC1Q15751 4861 aa5.9□□□□□ -1.46
COG3-201ENST00000349995 MUC2Q02817 5179 aa5.83□□□□□ -1.48
COG3-201ENST00000349995 KRTAP19-1Q8IUB9 90 aa5.83□□□□□ -1.48
COG3-201ENST00000349995 KRTAP8-1Q8IUC2 63 aa5.8□□□□□ -1.48
COG3-201ENST00000349995 LCE2CQ5TA81 110 aa5.79□□□□□ -1.48
COG3-201ENST00000349995 KRTAP19-2Q3LHN2 52 aa5.74□□□□□ -1.49
COG3-201ENST00000349995 RNF213Q63HN8 5207 aa5.74□□□□□ -1.49
COG3-201ENST00000349995 MUC17Q685J3 4493 aa5.73□□□□□ -1.49
COG3-201ENST00000349995 FAT4Q6V0I7 4981 aa5.69□□□□□ -1.5
COG3-201ENST00000349995 KRTAP9-8Q9BYQ0 159 aa5.67□□□□□ -1.5
COG3-201ENST00000349995 LCE3CQ5T5A8 94 aa5.64□□□□□ -1.51
COG3-201ENST00000349995 FLGP20930 4061 aaPredicted RBP5.63□□□□□ -1.51
COG3-201ENST00000349995 UBR4Q5T4S7 5183 aa5.63□□□□□ -1.51
COG3-201ENST00000349995 KRTAP19-8Q3LI54 63 aa5.59□□□□□ -1.51
COG3-201ENST00000349995 KRTAP19-5Q3LI72 72 aa5.59□□□□□ -1.51
COG3-201ENST00000349995 MT1BP07438 61 aa5.56□□□□□ -1.52
COG3-201ENST00000349995 KRTAP10-7P60409 375 aaPredicted RBP5.55□□□□□ -1.52
COG3-201ENST00000349995 FSIP2Q5CZC0 6907 aa5.53□□□□□ -1.52
COG3-201ENST00000349995 MT1XP80297 61 aa5.52□□□□□ -1.53
COG3-201ENST00000349995 HMCN2Q8NDA2 5059 aa5.52□□□□□ -1.53
COG3-201ENST00000349995 KRTAP9-3Q9BYQ3 159 aa5.47□□□□□ -1.53
COG3-201ENST00000349995 KRTAP12-4P60329 112 aa5.46□□□□□ -1.54
COG3-201ENST00000349995 SYNE1Q8NF91 8797 aaKnown RBP5.41□□□□□ -1.54
COG3-201ENST00000349995 KRTAP4-8A0A0G2JLE6 195 aa5.36□□□□□ -1.55
COG3-201ENST00000349995 KRTAP4-8Q9BYQ9 185 aa5.36□□□□□ -1.55
COG3-201ENST00000349995 LCE2BO14633 110 aa5.33□□□□□ -1.56
COG3-201ENST00000349995 SPRR2FQ96RM1 72 aa5.22□□□□□ -1.57
COG3-201ENST00000349995 LCE3BQ5TA77 95 aa5.14□□□□□ -1.59
COG3-201ENST00000349995 KRTAP4-7Q9BYR0 210 aa5.13□□□□□ -1.59
COG3-201ENST00000349995 OBSCNQ5VST9 7968 aa5.1□□□□□ -1.59
COG3-201ENST00000349995 LCE2AQ5TA79 106 aaPredicted RBP5.07□□□□□ -1.6
COG3-201ENST00000349995 MT1GP13640 62 aa5.06□□□□□ -1.6
COG3-201ENST00000349995 USH2AO75445 5202 aa5.05□□□□□ -1.6
COG3-201ENST00000349995 KRTAP19-4Q3LI73 84 aa4.96□□□□□ -1.62
COG3-201ENST00000349995 LCE3DQ9BYE3 92 aa4.91□□□□□ -1.62
COG3-201ENST00000349995 MT1LQ93083 61 aa4.88□□□□□ -1.63
COG3-201ENST00000349995 MT1EP04732 61 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms