RNA–Protein interactions for RNA: ENST00000349780.8

CDK5RAP2-201, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDK5RAP2, Length 6,228 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-201ENST00000349780 AKAP9Q99996 3911 aa4.88□□□□□ -1.63
CDK5RAP2-201ENST00000349780 KRTAP10-4P60372 401 aaPredicted RBP4.85□□□□□ -1.63
CDK5RAP2-201ENST00000349780 DNAH8Q96JB1 4490 aa4.79□□□□□ -1.64
CDK5RAP2-201ENST00000349780 CRCT1Q9UGL9 99 aa4.77□□□□□ -1.65
CDK5RAP2-201ENST00000349780 DNAH10Q8IVF4 4471 aa4.74□□□□□ -1.65
CDK5RAP2-201ENST00000349780 KRTAP10-5P60370 271 aa4.71□□□□□ -1.65
CDK5RAP2-201ENST00000349780 DNAH2Q9P225 4427 aa4.7□□□□□ -1.66
CDK5RAP2-201ENST00000349780 DNAH11Q96DT5 4516 aa4.7□□□□□ -1.66
CDK5RAP2-201ENST00000349780 DNAH1Q9P2D7 4330 aa4.68□□□□□ -1.66
CDK5RAP2-201ENST00000349780 SPRR5A0A1B0GTR4 108 aa4.65□□□□□ -1.67
CDK5RAP2-201ENST00000349780 DNAH3Q8TD57 4116 aa4.58□□□□□ -1.68
CDK5RAP2-201ENST00000349780 DNAH17Q9UFH2 4485 aa4.58□□□□□ -1.68
CDK5RAP2-201ENST00000349780 DNAH9Q9NYC9 4486 aa4.54□□□□□ -1.68
CDK5RAP2-201ENST00000349780 FRAS1Q86XX4 4008 aa4.51□□□□□ -1.69
CDK5RAP2-201ENST00000349780 ANK2Q01484 3957 aa4.49□□□□□ -1.69
CDK5RAP2-201ENST00000349780 LCE3CQ5T5A8 94 aa4.49□□□□□ -1.69
CDK5RAP2-201ENST00000349780 PLECQ15149 4684 aaKnown RBP4.49□□□□□ -1.69
CDK5RAP2-201ENST00000349780 KRTAP8-1Q8IUC2 63 aa4.49□□□□□ -1.69
CDK5RAP2-201ENST00000349780 ZNF469Q96JG9 3925 aaPredicted RBP4.48□□□□□ -1.69
CDK5RAP2-201ENST00000349780 MT1HP80294 61 aa4.44□□□□□ -1.7
CDK5RAP2-201ENST00000349780 KRTAP4-1Q9BYQ7 146 aa4.43□□□□□ -1.7
CDK5RAP2-201ENST00000349780 VPS13DQ5THJ4 4388 aa4.42□□□□□ -1.7
CDK5RAP2-201ENST00000349780 DNAH5Q8TE73 4624 aa4.42□□□□□ -1.7
CDK5RAP2-201ENST00000349780 SPRR2GQ9BYE4 73 aa4.41□□□□□ -1.7
CDK5RAP2-201ENST00000349780 KRTAP19-5Q3LI72 72 aa4.39□□□□□ -1.71
CDK5RAP2-201ENST00000349780 CMYA5Q8N3K9 4069 aa4.39□□□□□ -1.71
CDK5RAP2-201ENST00000349780 SACSQ9NZJ4 4579 aa4.36□□□□□ -1.71
CDK5RAP2-201ENST00000349780 DNAH6Q9C0G6 4158 aa4.34□□□□□ -1.71
CDK5RAP2-201ENST00000349780 FAT1Q14517 4588 aa4.3□□□□□ -1.72
CDK5RAP2-201ENST00000349780 MT2AP02795 61 aa4.3□□□□□ -1.72
CDK5RAP2-201ENST00000349780 LRP1BQ9NZR2 4599 aa4.29□□□□□ -1.72
CDK5RAP2-201ENST00000349780 VPS13BQ7Z7G8 4022 aa4.29□□□□□ -1.72
CDK5RAP2-201ENST00000349780 APOBP04114 4563 aaKnown RBP4.29□□□□□ -1.72
CDK5RAP2-201ENST00000349780 KRTAP12-4P60329 112 aa4.28□□□□□ -1.72
CDK5RAP2-201ENST00000349780 DNHD1Q96M86 4753 aa4.28□□□□□ -1.72
CDK5RAP2-201ENST00000349780 DYNC2H1Q8NCM8 4307 aaKnown RBP4.27□□□□□ -1.73
CDK5RAP2-201ENST00000349780 STARD9Q9P2P6 4700 aa4.24□□□□□ -1.73
CDK5RAP2-201ENST00000349780 LYSTQ99698 3801 aa4.23□□□□□ -1.73
CDK5RAP2-201ENST00000349780 DYNC1H1Q14204 4646 aaKnown RBP4.23□□□□□ -1.73
CDK5RAP2-201ENST00000349780 FAT2Q9NYQ8 4349 aa4.23□□□□□ -1.73
CDK5RAP2-201ENST00000349780 SPRR2FQ96RM1 72 aa4.2□□□□□ -1.74
CDK5RAP2-201ENST00000349780 HECTD4Q9Y4D8 3996 aa4.2□□□□□ -1.74
CDK5RAP2-201ENST00000349780 MT1FP04733 61 aa4.18□□□□□ -1.74
CDK5RAP2-201ENST00000349780 KRTAP10-7P60409 375 aaPredicted RBP4.18□□□□□ -1.74
CDK5RAP2-201ENST00000349780 KMT2AQ03164 3969 aa4.17□□□□□ -1.74
CDK5RAP2-201ENST00000349780 DNAH7Q8WXX0 4024 aa4.15□□□□□ -1.75
CDK5RAP2-201ENST00000349780 PRKDCP78527 4128 aaKnown RBP4.12□□□□□ -1.75
CDK5RAP2-201ENST00000349780 KRTAP19-4Q3LI73 84 aa4.11□□□□□ -1.75
CDK5RAP2-201ENST00000349780 KRTAP19-1Q8IUB9 90 aa4.1□□□□□ -1.75
CDK5RAP2-201ENST00000349780 RYR1P21817 5038 aa4.08□□□□□ -1.76
CDK5RAP2-201ENST00000349780 MT1XP80297 61 aa4.06□□□□□ -1.76
CDK5RAP2-201ENST00000349780 FAT3Q8TDW7 4589 aa4.06□□□□□ -1.76
CDK5RAP2-201ENST00000349780 SPRR2EP22531 72 aa4.04□□□□□ -1.76
CDK5RAP2-201ENST00000349780 SPRR2BP35325 72 aa4.04□□□□□ -1.76
CDK5RAP2-201ENST00000349780 SPRR2AP35326 72 aa4.04□□□□□ -1.76
CDK5RAP2-201ENST00000349780 LCE3BQ5TA77 95 aa4.04□□□□□ -1.76
CDK5RAP2-201ENST00000349780 KRTAP17-1Q9BYP8 105 aa4.02□□□□□ -1.77
CDK5RAP2-201ENST00000349780 KRTAP19-8Q3LI54 63 aa4.01□□□□□ -1.77
CDK5RAP2-201ENST00000349780 MYCBP2O75592 4640 aa3.99□□□□□ -1.77
CDK5RAP2-201ENST00000349780 RYR3Q15413 4870 aa3.99□□□□□ -1.77
CDK5RAP2-201ENST00000349780 LRP1Q07954 4544 aaKnown RBP3.95□□□□□ -1.78
CDK5RAP2-201ENST00000349780 MT1GP13640 62 aa3.94□□□□□ -1.78
CDK5RAP2-201ENST00000349780 SPRR2DP22532 72 aa3.92□□□□□ -1.78
CDK5RAP2-201ENST00000349780 LCE3DQ9BYE3 92 aa3.9□□□□□ -1.78
CDK5RAP2-201ENST00000349780 MT1BP07438 61 aa3.9□□□□□ -1.79
CDK5RAP2-201ENST00000349780 BIRC6Q9NR09 4857 aa3.88□□□□□ -1.79
CDK5RAP2-201ENST00000349780 LCE3EQ5T5B0 92 aa3.88□□□□□ -1.79
CDK5RAP2-201ENST00000349780 HERC1Q15751 4861 aa3.87□□□□□ -1.79
CDK5RAP2-201ENST00000349780 LCE2BO14633 110 aa3.86□□□□□ -1.79
CDK5RAP2-201ENST00000349780 RYR2Q92736 4967 aa3.85□□□□□ -1.79
CDK5RAP2-201ENST00000349780 PRM1P04553 51 aa3.85□□□□□ -1.79
CDK5RAP2-201ENST00000349780 KRTAP4-7Q9BYR0 210 aa3.84□□□□□ -1.79
CDK5RAP2-201ENST00000349780 PKHD1L1Q86WI1 4243 aa3.84□□□□□ -1.8
CDK5RAP2-201ENST00000349780 KRTAP4-8A0A0G2JLE6 195 aa3.83□□□□□ -1.8
CDK5RAP2-201ENST00000349780 KRTAP4-8Q9BYQ9 185 aa3.83□□□□□ -1.8
CDK5RAP2-201ENST00000349780 KRTAP9-8Q9BYQ0 159 aa3.82□□□□□ -1.8
CDK5RAP2-201ENST00000349780 PKD1P98161 4303 aa3.82□□□□□ -1.8
CDK5RAP2-201ENST00000349780 HSPG2P98160 4391 aa3.77□□□□□ -1.81
CDK5RAP2-201ENST00000349780 KRTAP9-3Q9BYQ3 159 aa3.76□□□□□ -1.81
CDK5RAP2-201ENST00000349780 LCE2CQ5TA81 110 aa3.75□□□□□ -1.81
CDK5RAP2-201ENST00000349780 KIAA1109Q2LD37 5005 aa3.75□□□□□ -1.81
CDK5RAP2-201ENST00000349780 KRTAP2-3P0C7H8 128 aa3.74□□□□□ -1.81
CDK5RAP2-201ENST00000349780 KRTAP2-4Q9BYR9 128 aa3.74□□□□□ -1.81
CDK5RAP2-201ENST00000349780 KRTAP2-1Q9BYU5 128 aa3.74□□□□□ -1.81
CDK5RAP2-201ENST00000349780 PKHD1P08F94 4074 aa3.73□□□□□ -1.81
CDK5RAP2-201ENST00000349780 KRTAP9-2Q9BYQ4 174 aa3.73□□□□□ -1.81
CDK5RAP2-201ENST00000349780 LRP2P98164 4655 aa3.71□□□□□ -1.82
CDK5RAP2-201ENST00000349780 HERC2O95714 4834 aa3.7□□□□□ -1.82
CDK5RAP2-201ENST00000349780 MT3P25713 68 aa3.69□□□□□ -1.82
CDK5RAP2-201ENST00000349780 MT1LQ93083 61 aa3.69□□□□□ -1.82
CDK5RAP2-201ENST00000349780 TNXBP22105 4242 aa3.66□□□□□ -1.82
CDK5RAP2-201ENST00000349780 LPAP08519 4548 aa3.65□□□□□ -1.82
CDK5RAP2-201ENST00000349780 KRTAP19-2Q3LHN2 52 aa3.63□□□□□ -1.83
CDK5RAP2-201ENST00000349780 FLGP20930 4061 aaPredicted RBP3.63□□□□□ -1.83
CDK5RAP2-201ENST00000349780 KRTAP9-6A0A140TA67 174 aa3.62□□□□□ -1.83
CDK5RAP2-201ENST00000349780 LCE2DQ5TA82 110 aaPredicted RBP3.61□□□□□ -1.83
CDK5RAP2-201ENST00000349780 LOC100996750A0A140TA64 210 aa3.61□□□□□ -1.83
CDK5RAP2-201ENST00000349780 PCLOQ9Y6V0 5065 aa3.6□□□□□ -1.83
CDK5RAP2-201ENST00000349780 MT1EP04732 61 aa3.58□□□□□ -1.84
CDK5RAP2-201ENST00000349780 KRTAP19-3Q7Z4W3 81 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms