RNA–Protein interactions for RNA: ENST00000349721.7

SMARCA2-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5 BASIC

Gene SMARCA2, Length 5,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-203ENST00000349721 DNAH2Q9P225 4427 aa5.48□□□□□ -1.53
SMARCA2-203ENST00000349721 RELNP78509 3460 aa5.42□□□□□ -1.54
SMARCA2-203ENST00000349721 MT1FP04733 61 aa5.4□□□□□ -1.54
SMARCA2-203ENST00000349721 KRTAP12-4P60329 112 aa5.39□□□□□ -1.55
SMARCA2-203ENST00000349721 SPRR2EP22531 72 aa5.37□□□□□ -1.55
SMARCA2-203ENST00000349721 SPRR2BP35325 72 aa5.37□□□□□ -1.55
SMARCA2-203ENST00000349721 SPRR2AP35326 72 aa5.37□□□□□ -1.55
SMARCA2-203ENST00000349721 NBPF19A0A087WUL8 3843 aa5.37□□□□□ -1.55
SMARCA2-203ENST00000349721 FBN1P35555 2871 aaKnown RBP5.37□□□□□ -1.55
SMARCA2-203ENST00000349721 ZFHX3Q15911 3703 aa5.35□□□□□ -1.55
SMARCA2-203ENST00000349721 OTOGQ6ZRI0 2925 aa5.35□□□□□ -1.55
SMARCA2-203ENST00000349721 DNAH11Q96DT5 4516 aa5.33□□□□□ -1.56
SMARCA2-203ENST00000349721 LCE3BQ5TA77 95 aa5.33□□□□□ -1.56
SMARCA2-203ENST00000349721 BSNQ9UPA5 3926 aa5.31□□□□□ -1.56
SMARCA2-203ENST00000349721 DNAH10Q8IVF4 4471 aa5.31□□□□□ -1.56
SMARCA2-203ENST00000349721 CSMD1Q96PZ7 3565 aa5.25□□□□□ -1.57
SMARCA2-203ENST00000349721 DNAH1Q9P2D7 4330 aa5.23□□□□□ -1.57
SMARCA2-203ENST00000349721 SPRR2DP22532 72 aa5.22□□□□□ -1.57
SMARCA2-203ENST00000349721 SPRR5A0A1B0GTR4 108 aa5.22□□□□□ -1.57
SMARCA2-203ENST00000349721 CSMD2Q7Z408 3487 aa5.21□□□□□ -1.58
SMARCA2-203ENST00000349721 KRTAP19-8Q3LI54 63 aa5.19□□□□□ -1.58
SMARCA2-203ENST00000349721 LCE3DQ9BYE3 92 aa5.17□□□□□ -1.58
SMARCA2-203ENST00000349721 SVEP1Q4LDE5 3571 aa5.17□□□□□ -1.58
SMARCA2-203ENST00000349721 LCE2BO14633 110 aa5.17□□□□□ -1.58
SMARCA2-203ENST00000349721 DNAH5Q8TE73 4624 aa5.16□□□□□ -1.58
SMARCA2-203ENST00000349721 VPS13CQ709C8 3753 aa5.16□□□□□ -1.58
SMARCA2-203ENST00000349721 MT1GP13640 62 aa5.15□□□□□ -1.59
SMARCA2-203ENST00000349721 LCE3EQ5T5B0 92 aa5.13□□□□□ -1.59
SMARCA2-203ENST00000349721 FAT1Q14517 4588 aa5.11□□□□□ -1.59
SMARCA2-203ENST00000349721 PLECQ15149 4684 aaKnown RBP5.1□□□□□ -1.59
SMARCA2-203ENST00000349721 TRRAPQ9Y4A5 3859 aa5.08□□□□□ -1.6
SMARCA2-203ENST00000349721 DNAH8Q96JB1 4490 aa5.07□□□□□ -1.6
SMARCA2-203ENST00000349721 CUBNO60494 3623 aa5.07□□□□□ -1.6
SMARCA2-203ENST00000349721 MT1XP80297 61 aa5.06□□□□□ -1.6
SMARCA2-203ENST00000349721 KRTAP19-1Q8IUB9 90 aa5.05□□□□□ -1.6
SMARCA2-203ENST00000349721 DNAH17Q9UFH2 4485 aa5.03□□□□□ -1.6
SMARCA2-203ENST00000349721 DNAH9Q9NYC9 4486 aa4.99□□□□□ -1.61
SMARCA2-203ENST00000349721 LRP1Q07954 4544 aaKnown RBP4.92□□□□□ -1.62
SMARCA2-203ENST00000349721 ZNF469Q96JG9 3925 aaPredicted RBP4.91□□□□□ -1.62
SMARCA2-203ENST00000349721 MT1BP07438 61 aa4.9□□□□□ -1.63
SMARCA2-203ENST00000349721 SACSQ9NZJ4 4579 aa4.88□□□□□ -1.63
SMARCA2-203ENST00000349721 LCE2CQ5TA81 110 aa4.86□□□□□ -1.63
SMARCA2-203ENST00000349721 DYNC1H1Q14204 4646 aaKnown RBP4.85□□□□□ -1.63
SMARCA2-203ENST00000349721 AKAP9Q99996 3911 aa4.83□□□□□ -1.64
SMARCA2-203ENST00000349721 HERC1Q15751 4861 aa4.83□□□□□ -1.64
SMARCA2-203ENST00000349721 KRTAP4-8A0A0G2JLE6 195 aa4.8□□□□□ -1.64
SMARCA2-203ENST00000349721 KRTAP4-8Q9BYQ9 185 aa4.8□□□□□ -1.64
SMARCA2-203ENST00000349721 LCE2DQ5TA82 110 aaPredicted RBP4.79□□□□□ -1.64
SMARCA2-203ENST00000349721 VPS13DQ5THJ4 4388 aa4.79□□□□□ -1.64
SMARCA2-203ENST00000349721 MT1LQ93083 61 aa4.79□□□□□ -1.64
SMARCA2-203ENST00000349721 APOBP04114 4563 aaKnown RBP4.78□□□□□ -1.64
SMARCA2-203ENST00000349721 FAT2Q9NYQ8 4349 aa4.78□□□□□ -1.64
SMARCA2-203ENST00000349721 PRM1P04553 51 aa4.77□□□□□ -1.65
SMARCA2-203ENST00000349721 CMYA5Q8N3K9 4069 aa4.77□□□□□ -1.65
SMARCA2-203ENST00000349721 FAT3Q8TDW7 4589 aa4.77□□□□□ -1.65
SMARCA2-203ENST00000349721 DNAH3Q8TD57 4116 aa4.75□□□□□ -1.65
SMARCA2-203ENST00000349721 KRTAP19-3Q7Z4W3 81 aa4.75□□□□□ -1.65
SMARCA2-203ENST00000349721 CSMD3Q7Z407 3707 aa4.75□□□□□ -1.65
SMARCA2-203ENST00000349721 DYNC2H1Q8NCM8 4307 aaKnown RBP4.73□□□□□ -1.65
SMARCA2-203ENST00000349721 KRTAP9-8Q9BYQ0 159 aa4.71□□□□□ -1.65
SMARCA2-203ENST00000349721 LRP1BQ9NZR2 4599 aa4.7□□□□□ -1.66
SMARCA2-203ENST00000349721 MT3P25713 68 aa4.67□□□□□ -1.66
SMARCA2-203ENST00000349721 KRTAP9-3Q9BYQ3 159 aa4.67□□□□□ -1.66
SMARCA2-203ENST00000349721 DNAH6Q9C0G6 4158 aa4.65□□□□□ -1.67
SMARCA2-203ENST00000349721 RYR1P21817 5038 aa4.63□□□□□ -1.67
SMARCA2-203ENST00000349721 MT1EP04732 61 aa4.61□□□□□ -1.67
SMARCA2-203ENST00000349721 HSPG2P98160 4391 aa4.6□□□□□ -1.67
SMARCA2-203ENST00000349721 KRTAP4-7Q9BYR0 210 aa4.6□□□□□ -1.67
SMARCA2-203ENST00000349721 MYCBP2O75592 4640 aa4.56□□□□□ -1.68
SMARCA2-203ENST00000349721 MT4P47944 62 aa4.55□□□□□ -1.68
SMARCA2-203ENST00000349721 LCE1BQ5T7P3 118 aa4.5□□□□□ -1.69
SMARCA2-203ENST00000349721 ANK2Q01484 3957 aa4.5□□□□□ -1.69
SMARCA2-203ENST00000349721 MT1MQ8N339 61 aa4.49□□□□□ -1.69
SMARCA2-203ENST00000349721 RYR3Q15413 4870 aa4.48□□□□□ -1.69
SMARCA2-203ENST00000349721 DNHD1Q96M86 4753 aa4.47□□□□□ -1.69
SMARCA2-203ENST00000349721 DNAH7Q8WXX0 4024 aa4.46□□□□□ -1.7
SMARCA2-203ENST00000349721 LCE1DQ5T752 114 aa4.46□□□□□ -1.7
SMARCA2-203ENST00000349721 STARD9Q9P2P6 4700 aa4.41□□□□□ -1.7
SMARCA2-203ENST00000349721 VPS13BQ7Z7G8 4022 aa4.41□□□□□ -1.7
SMARCA2-203ENST00000349721 PRKDCP78527 4128 aaKnown RBP4.41□□□□□ -1.7
SMARCA2-203ENST00000349721 PKD1P98161 4303 aa4.37□□□□□ -1.71
SMARCA2-203ENST00000349721 LOC100996750A0A140TA64 210 aa4.36□□□□□ -1.71
SMARCA2-203ENST00000349721 KRTAP17-1Q9BYP8 105 aa4.33□□□□□ -1.72
SMARCA2-203ENST00000349721 KRTAP19-6Q3LI70 58 aa4.31□□□□□ -1.72
SMARCA2-203ENST00000349721 PKHD1L1Q86WI1 4243 aa4.3□□□□□ -1.72
SMARCA2-203ENST00000349721 FRAS1Q86XX4 4008 aa4.3□□□□□ -1.72
SMARCA2-203ENST00000349721 MT1AP04731 61 aa4.3□□□□□ -1.72
SMARCA2-203ENST00000349721 KRTAP2-3P0C7H8 128 aa4.29□□□□□ -1.72
SMARCA2-203ENST00000349721 KRTAP2-4Q9BYR9 128 aa4.29□□□□□ -1.72
SMARCA2-203ENST00000349721 KRTAP2-1Q9BYU5 128 aa4.29□□□□□ -1.72
SMARCA2-203ENST00000349721 RYR2Q92736 4967 aa4.28□□□□□ -1.72
SMARCA2-203ENST00000349721 LCE5AQ5TCM9 118 aa4.27□□□□□ -1.73
SMARCA2-203ENST00000349721 KRTAP4-3Q9BYR4 195 aa4.23□□□□□ -1.73
SMARCA2-203ENST00000349721 HERC2O95714 4834 aa4.22□□□□□ -1.73
SMARCA2-203ENST00000349721 KRTAP9-2Q9BYQ4 174 aa4.21□□□□□ -1.74
SMARCA2-203ENST00000349721 KMT2AQ03164 3969 aa4.21□□□□□ -1.74
SMARCA2-203ENST00000349721 LYSTQ99698 3801 aa4.17□□□□□ -1.74
SMARCA2-203ENST00000349721 BIRC6Q9NR09 4857 aa4.16□□□□□ -1.74
SMARCA2-203ENST00000349721 LRP2P98164 4655 aa4.14□□□□□ -1.75
SMARCA2-203ENST00000349721 KRTAP20-1Q3LI63 56 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms