RNA–Protein interactions for RNA: ENST00000349721.7

SMARCA2-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5 BASIC

Gene SMARCA2, Length 5,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-203ENST00000349721 DCAF8L2P0C7V8 631 aa24.61■■□□□ 1.53
SMARCA2-203ENST00000349721 PELP1Q8IZL8 1130 aaKnown RBP24.6■■□□□ 1.53
SMARCA2-203ENST00000349721 MYT1Q01538 1121 aa23.57■■□□□ 1.36
SMARCA2-203ENST00000349721 SUPT5HO00267 1087 aaKnown RBP23.56■■□□□ 1.36
SMARCA2-203ENST00000349721 ERICH6Q7L0X2 663 aa23.53■■□□□ 1.36
SMARCA2-203ENST00000349721 CCER1Q8TC90 406 aaPredicted RBP23.44■■□□□ 1.34
SMARCA2-203ENST00000349721 CENPBP07199 599 aaPredicted RBP23.24■■□□□ 1.31
SMARCA2-203ENST00000349721 APLP2Q06481 763 aa23.12■■□□□ 1.29
SMARCA2-203ENST00000349721 EHMT2Q96KQ7 1210 aa22.99■■□□□ 1.27
SMARCA2-203ENST00000349721 ZEB1P37275 1124 aaPredicted RBP22.88■■□□□ 1.25
SMARCA2-203ENST00000349721 FAM9AQ8IZU1 332 aaPredicted RBP22.84■■□□□ 1.25
SMARCA2-203ENST00000349721 NEFLP07196 543 aa22.72■■□□□ 1.23
SMARCA2-203ENST00000349721 PCGF6Q9BYE7 350 aa22.71■■□□□ 1.23
SMARCA2-203ENST00000349721 SHROOM4Q9ULL8 1493 aa22.67■■□□□ 1.22
SMARCA2-203ENST00000349721 TTBK1Q5TCY1 1321 aaPredicted RBP22.39■■□□□ 1.17
SMARCA2-203ENST00000349721 YTHDC1Q96MU7 727 aaKnown RBP22.38■■□□□ 1.17
SMARCA2-203ENST00000349721 DAXXQ9UER7 740 aaPredicted RBP22.28■■□□□ 1.16
SMARCA2-203ENST00000349721 NISCHQ9Y2I1 1504 aa21.95■■□□□ 1.1
SMARCA2-203ENST00000349721 RTL5Q5HYW3 569 aaPredicted RBP21.89■■□□□ 1.09
SMARCA2-203ENST00000349721 RANGAP1P46060 587 aaPredicted RBP21.88■■□□□ 1.09
SMARCA2-203ENST00000349721 ATP1B4Q9UN42 357 aaPredicted RBP21.87■■□□□ 1.09
SMARCA2-203ENST00000349721 TRIM41Q8WV44 630 aa21.86■■□□□ 1.09
SMARCA2-203ENST00000349721 UBTFP17480 764 aaKnown RBP21.73■■□□□ 1.07
SMARCA2-203ENST00000349721 ZNF316A6NFI3 1004 aaPredicted RBP21.71■■□□□ 1.07
SMARCA2-203ENST00000349721 TRIM26Q12899 539 aaPredicted RBP21.68■■□□□ 1.06
SMARCA2-203ENST00000349721 HRCP23327 699 aa21.67■■□□□ 1.06
SMARCA2-203ENST00000349721 CLSPNQ9HAW4 1339 aa21.44■■□□□ 1.02
SMARCA2-203ENST00000349721 POLR3GLQ9BT43 218 aa21.42■■□□□ 1.02
SMARCA2-203ENST00000349721 PPARGC1BQ86YN6 1023 aaKnown RBP21.33■■□□□ 1
SMARCA2-203ENST00000349721 MYT1LQ9UL68 1186 aa21.32■■□□□ 1
SMARCA2-203ENST00000349721 DIEXFQ68CQ4 756 aaKnown RBP21.23■□□□□ 0.99
SMARCA2-203ENST00000349721 CDK11AQ9UQ88 783 aaPredicted RBP21.17■□□□□ 0.98
SMARCA2-203ENST00000349721 ITGAEP38570 1179 aa21.16■□□□□ 0.98
SMARCA2-203ENST00000349721 CNGB1Q14028 1251 aaPredicted RBP21.11■□□□□ 0.97
SMARCA2-203ENST00000349721 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.08■□□□□ 0.97
SMARCA2-203ENST00000349721 HNRNPUL2Q1KMD3 747 aaKnown RBP21.08■□□□□ 0.97
SMARCA2-203ENST00000349721 GTF3C3Q9Y5Q9 886 aa21.04■□□□□ 0.96
SMARCA2-203ENST00000349721 GLIPR1L2Q4G1C9 344 aa21.02■□□□□ 0.96
SMARCA2-203ENST00000349721 SLC4A1APQ9BWU0 796 aaKnown RBP20.99■□□□□ 0.95
SMARCA2-203ENST00000349721 BCANQ96GW7 911 aa20.98■□□□□ 0.95
SMARCA2-203ENST00000349721 ZBTB47Q9UFB7 747 aaPredicted RBP20.97■□□□□ 0.95
SMARCA2-203ENST00000349721 EIF5BO60841 1220 aaKnown RBP20.91■□□□□ 0.94
SMARCA2-203ENST00000349721 ANP32AP39687 249 aaKnown RBP20.9■□□□□ 0.94
SMARCA2-203ENST00000349721 ANP32CO43423 234 aa20.83■□□□□ 0.93
SMARCA2-203ENST00000349721 ANP32BQ92688 251 aaKnown RBP20.82■□□□□ 0.92
SMARCA2-203ENST00000349721 CHIC1Q5VXU3 224 aa20.8■□□□□ 0.92
SMARCA2-203ENST00000349721 LOC105371045A0A1W2PR82 267 aa20.73■□□□□ 0.91
SMARCA2-203ENST00000349721 CANXP27824 592 aaKnown RBP20.7■□□□□ 0.9
SMARCA2-203ENST00000349721 ACIN1Q9UKV3 1341 aaKnown RBP20.68■□□□□ 0.9
SMARCA2-203ENST00000349721 TRIM52Q96A61 297 aa20.59■□□□□ 0.89
SMARCA2-203ENST00000349721 NEUROD1Q13562 356 aa20.57■□□□□ 0.88
SMARCA2-203ENST00000349721 FAM50AQ14320 339 aaKnown RBP20.57■□□□□ 0.88
SMARCA2-203ENST00000349721 NPM2Q86SE8 214 aaKnown RBP20.56■□□□□ 0.88
SMARCA2-203ENST00000349721 NEFMP07197 916 aa20.49■□□□□ 0.87
SMARCA2-203ENST00000349721 HSP90AA1P07900 732 aaKnown RBP20.46■□□□□ 0.87
SMARCA2-203ENST00000349721 UPF2Q9HAU5 1272 aaKnown RBP20.45■□□□□ 0.86
SMARCA2-203ENST00000349721 BCL11AQ9H165 835 aa20.41■□□□□ 0.86
SMARCA2-203ENST00000349721 ZNF326Q5BKZ1 582 aaKnown RBP20.38■□□□□ 0.85
SMARCA2-203ENST00000349721 SLC24A1O60721 1099 aa20.33■□□□□ 0.85
SMARCA2-203ENST00000349721 FKBP8Q14318 412 aa20.33■□□□□ 0.85
SMARCA2-203ENST00000349721 NBR1Q14596 966 aa20.25■□□□□ 0.83
SMARCA2-203ENST00000349721 TNNT2P45379 298 aaPredicted RBP20.23■□□□□ 0.83
SMARCA2-203ENST00000349721 ANP32EQ9BTT0 268 aa20.12■□□□□ 0.81
SMARCA2-203ENST00000349721 CCDC136Q96JN2 1154 aa20.1■□□□□ 0.81
SMARCA2-203ENST00000349721 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.1■□□□□ 0.81
SMARCA2-203ENST00000349721 TRIM44Q96DX7 344 aaPredicted RBP20.08■□□□□ 0.81
SMARCA2-203ENST00000349721 ARXQ96QS3 562 aa20.08■□□□□ 0.81
SMARCA2-203ENST00000349721 HNRNPUQ00839 825 aaKnown RBP eCLIP20.08■□□□□ 0.8
SMARCA2-203ENST00000349721 CDK11BP21127 795 aaKnown RBP20.06■□□□□ 0.8
SMARCA2-203ENST00000349721 DDRGK1Q96HY6 314 aa20.04■□□□□ 0.8
SMARCA2-203ENST00000349721 BECN1Q14457 450 aa19.97■□□□□ 0.79
SMARCA2-203ENST00000349721 NCLP19338 710 aaKnown RBP19.95■□□□□ 0.78
SMARCA2-203ENST00000349721 FAM9BQ8IZU0 186 aa19.94■□□□□ 0.78
SMARCA2-203ENST00000349721 ERICH6BQ5W0A0 696 aa19.94■□□□□ 0.78
SMARCA2-203ENST00000349721 GOLGA6L22H0YM25 854 aa19.92■□□□□ 0.78
SMARCA2-203ENST00000349721 TONSLQ96HA7 1378 aa19.9■□□□□ 0.78
SMARCA2-203ENST00000349721 ESF1Q9H501 851 aaKnown RBP19.88■□□□□ 0.77
SMARCA2-203ENST00000349721 FBLN2P98095 1184 aa19.87■□□□□ 0.77
SMARCA2-203ENST00000349721 TMC1Q8TDI8 760 aa19.83■□□□□ 0.76
SMARCA2-203ENST00000349721 MYH16Q9H6N6 1097 aa19.83■□□□□ 0.76
SMARCA2-203ENST00000349721 PTMAP06454 111 aaKnown RBP19.82■□□□□ 0.76
SMARCA2-203ENST00000349721 DDX10Q13206 875 aaKnown RBP19.82■□□□□ 0.76
SMARCA2-203ENST00000349721 PPM1GO15355 546 aaPredicted RBP19.81■□□□□ 0.76
SMARCA2-203ENST00000349721 SCAF1Q9H7N4 1312 aaKnown RBP19.81■□□□□ 0.76
SMARCA2-203ENST00000349721 NAP1L5Q96NT1 182 aaPredicted RBP19.8■□□□□ 0.76
SMARCA2-203ENST00000349721 DNTTIP2Q5QJE6 756 aaKnown RBP19.79■□□□□ 0.76
SMARCA2-203ENST00000349721 WDR43Q15061 677 aaKnown RBP eCLIP19.79■□□□□ 0.76
SMARCA2-203ENST00000349721 SALL2Q9Y467 1007 aaPredicted RBP19.76■□□□□ 0.75
SMARCA2-203ENST00000349721 STAG3Q9UJ98 1225 aa19.73■□□□□ 0.75
SMARCA2-203ENST00000349721 ZRSR1Q15695 479 aaKnown RBP19.72■□□□□ 0.75
SMARCA2-203ENST00000349721 MRS2Q9HD23 443 aa19.71■□□□□ 0.75
SMARCA2-203ENST00000349721 ZNF777Q9ULD5 760 aaPredicted RBP19.65■□□□□ 0.74
SMARCA2-203ENST00000349721 IRX6P78412 446 aaPredicted RBP19.64■□□□□ 0.73
SMARCA2-203ENST00000349721 GOLGA6L6A8MZA4 724 aa19.61■□□□□ 0.73
SMARCA2-203ENST00000349721 CHGAP10645 457 aaKnown RBP19.61■□□□□ 0.73
SMARCA2-203ENST00000349721 CASC1Q6TDU7 716 aa19.59■□□□□ 0.73
SMARCA2-203ENST00000349721 RTN4Q9NQC3 1192 aaKnown RBP19.57■□□□□ 0.72
SMARCA2-203ENST00000349721 CSRNP3Q8WYN3 585 aa19.56■□□□□ 0.72
SMARCA2-203ENST00000349721 MIER1Q8N108 512 aa19.55■□□□□ 0.72
SMARCA2-203ENST00000349721 DCAF1Q9Y4B6 1507 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 177 ms