RNA–Protein interactions for RNA: ENST00000348332.7

NCOA1-202, Transcript of nuclear receptor coactivator 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene NCOA1, Length 6,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA1-202ENST00000348332 KRTAP16-1A8MUX0 517 aa2.23□□□□□ -2.05
NCOA1-202ENST00000348332 XP32Q5T750 250 aa2.23□□□□□ -2.05
NCOA1-202ENST00000348332 CRCT1Q9UGL9 99 aa2.23□□□□□ -2.05
NCOA1-202ENST00000348332 CMYA5Q8N3K9 4069 aa2.23□□□□□ -2.05
NCOA1-202ENST00000348332 MT1HL1P0DM35 61 aa2.22□□□□□ -2.05
NCOA1-202ENST00000348332 PRKDCP78527 4128 aaKnown RBP2.22□□□□□ -2.05
NCOA1-202ENST00000348332 DNAH11Q96DT5 4516 aa2.21□□□□□ -2.06
NCOA1-202ENST00000348332 VPS13DQ5THJ4 4388 aa2.21□□□□□ -2.06
NCOA1-202ENST00000348332 A6NN06 94 aa2.21□□□□□ -2.06
NCOA1-202ENST00000348332 KRTAP13-3Q3SY46 172 aa2.2□□□□□ -2.06
NCOA1-202ENST00000348332 DNAH10Q8IVF4 4471 aa2.2□□□□□ -2.06
NCOA1-202ENST00000348332 PLECQ15149 4684 aaKnown RBP2.2□□□□□ -2.06
NCOA1-202ENST00000348332 KIAA1109Q2LD37 5005 aa2.19□□□□□ -2.06
NCOA1-202ENST00000348332 SRRM2Q9UQ35 2752 aaKnown RBP2.19□□□□□ -2.06
NCOA1-202ENST00000348332 DNAH17Q9UFH2 4485 aa2.19□□□□□ -2.06
NCOA1-202ENST00000348332 KRTAP4-5Q9BYR2 181 aa2.18□□□□□ -2.06
NCOA1-202ENST00000348332 RNF213Q63HN8 5207 aa2.18□□□□□ -2.06
NCOA1-202ENST00000348332 HERC2O95714 4834 aa2.17□□□□□ -2.06
NCOA1-202ENST00000348332 DNAH7Q8WXX0 4024 aa2.16□□□□□ -2.06
NCOA1-202ENST00000348332 HMCN2Q8NDA2 5059 aa2.16□□□□□ -2.06
NCOA1-202ENST00000348332 PP632Q6XCG6 107 aa2.16□□□□□ -2.06
NCOA1-202ENST00000348332 H0YAA0 97 aa2.15□□□□□ -2.07
NCOA1-202ENST00000348332 KRTAP25-1Q3LHN0 102 aa2.15□□□□□ -2.07
NCOA1-202ENST00000348332 BIRC6Q9NR09 4857 aa2.13□□□□□ -2.07
NCOA1-202ENST00000348332 FAT2Q9NYQ8 4349 aa2.13□□□□□ -2.07
NCOA1-202ENST00000348332 STARD9Q9P2P6 4700 aa2.12□□□□□ -2.07
NCOA1-202ENST00000348332 DYNC1H1Q14204 4646 aaKnown RBP2.11□□□□□ -2.07
NCOA1-202ENST00000348332 LORP23490 312 aaPredicted RBP2.11□□□□□ -2.07
NCOA1-202ENST00000348332 HERC1Q15751 4861 aa2.11□□□□□ -2.07
NCOA1-202ENST00000348332 SACSQ9NZJ4 4579 aa2.1□□□□□ -2.07
NCOA1-202ENST00000348332 DNAH2Q9P225 4427 aa2.09□□□□□ -2.07
NCOA1-202ENST00000348332 FAT3Q8TDW7 4589 aa2.09□□□□□ -2.07
NCOA1-202ENST00000348332 KRTAP12-2P59991 146 aa2.08□□□□□ -2.08
NCOA1-202ENST00000348332 KRTAP15-1Q3LI76 137 aa2.08□□□□□ -2.08
NCOA1-202ENST00000348332 FRAS1Q86XX4 4008 aa2.08□□□□□ -2.08
NCOA1-202ENST00000348332 LRP1BQ9NZR2 4599 aa2.07□□□□□ -2.08
NCOA1-202ENST00000348332 DNAH5Q8TE73 4624 aa2.07□□□□□ -2.08
NCOA1-202ENST00000348332 DNAH8Q96JB1 4490 aa2.06□□□□□ -2.08
NCOA1-202ENST00000348332 KMT2AQ03164 3969 aa2.05□□□□□ -2.08
NCOA1-202ENST00000348332 PKD1P98161 4303 aa2.05□□□□□ -2.08
NCOA1-202ENST00000348332 KRTAP10-6P60371 365 aaPredicted RBP2.03□□□□□ -2.08
NCOA1-202ENST00000348332 KRTAP10-7P60409 375 aaPredicted RBP2.03□□□□□ -2.08
NCOA1-202ENST00000348332 HECTD4Q9Y4D8 3996 aa2.02□□□□□ -2.09
NCOA1-202ENST00000348332 VPS13BQ7Z7G8 4022 aa2.01□□□□□ -2.09
NCOA1-202ENST00000348332 MUC2Q02817 5179 aa1.99□□□□□ -2.09
NCOA1-202ENST00000348332 APOBP04114 4563 aaKnown RBP1.99□□□□□ -2.09
NCOA1-202ENST00000348332 PKHD1L1Q86WI1 4243 aa1.97□□□□□ -2.09
NCOA1-202ENST00000348332 HSPG2P98160 4391 aa1.97□□□□□ -2.09
NCOA1-202ENST00000348332 PKHD1P08F94 4074 aa1.97□□□□□ -2.09
NCOA1-202ENST00000348332 FAT4Q6V0I7 4981 aa1.97□□□□□ -2.09
NCOA1-202ENST00000348332 LCE2BO14633 110 aa1.96□□□□□ -2.1
NCOA1-202ENST00000348332 KRTAP8-1Q8IUC2 63 aa1.95□□□□□ -2.1
NCOA1-202ENST00000348332 KRTAP13-4Q3LI77 160 aa1.93□□□□□ -2.1
NCOA1-202ENST00000348332 KRTAP10-12P60413 245 aa1.93□□□□□ -2.1
NCOA1-202ENST00000348332 FAT1Q14517 4588 aa1.92□□□□□ -2.1
NCOA1-202ENST00000348332 KRTAP10-5P60370 271 aa1.91□□□□□ -2.1
NCOA1-202ENST00000348332 KRTAP23-1A1A580 65 aa1.9□□□□□ -2.1
NCOA1-202ENST00000348332 LCE2AQ5TA79 106 aaPredicted RBP1.9□□□□□ -2.11
NCOA1-202ENST00000348332 MT1HP80294 61 aa1.89□□□□□ -2.11
NCOA1-202ENST00000348332 MYCBP2O75592 4640 aa1.88□□□□□ -2.11
NCOA1-202ENST00000348332 KRTAP4-1Q9BYQ7 146 aa1.86□□□□□ -2.11
NCOA1-202ENST00000348332 SPRR2FQ96RM1 72 aa1.86□□□□□ -2.11
NCOA1-202ENST00000348332 KRTAP12-1P59990 96 aa1.85□□□□□ -2.11
NCOA1-202ENST00000348332 LCE2CQ5TA81 110 aa1.85□□□□□ -2.11
NCOA1-202ENST00000348332 USH2AO75445 5202 aa1.83□□□□□ -2.12
NCOA1-202ENST00000348332 MUC17Q685J3 4493 aa1.82□□□□□ -2.12
NCOA1-202ENST00000348332 KRTAP12-3P60328 96 aa1.82□□□□□ -2.12
NCOA1-202ENST00000348332 KRTAP3-1Q9BYR8 98 aa1.82□□□□□ -2.12
NCOA1-202ENST00000348332 SSPOA2VEC9 5147 aa1.81□□□□□ -2.12
NCOA1-202ENST00000348332 TNXBP22105 4242 aa1.81□□□□□ -2.12
NCOA1-202ENST00000348332 MT2AP02795 61 aa1.8□□□□□ -2.12
NCOA1-202ENST00000348332 SPRR5A0A1B0GTR4 108 aa1.8□□□□□ -2.12
NCOA1-202ENST00000348332 SPRR2EP22531 72 aa1.8□□□□□ -2.12
NCOA1-202ENST00000348332 SPRR2BP35325 72 aa1.8□□□□□ -2.12
NCOA1-202ENST00000348332 SPRR2AP35326 72 aa1.8□□□□□ -2.12
NCOA1-202ENST00000348332 LRP1Q07954 4544 aaKnown RBP1.79□□□□□ -2.12
NCOA1-202ENST00000348332 KRTAP9-2Q9BYQ4 174 aa1.77□□□□□ -2.13
NCOA1-202ENST00000348332 SPRR2GQ9BYE4 73 aa1.77□□□□□ -2.13
NCOA1-202ENST00000348332 KRTAP19-2Q3LHN2 52 aa1.77□□□□□ -2.13
NCOA1-202ENST00000348332 LCE3AQ5TA76 89 aa1.76□□□□□ -2.13
NCOA1-202ENST00000348332 KRTAP9-6A0A140TA67 174 aa1.75□□□□□ -2.13
NCOA1-202ENST00000348332 MT1FP04733 61 aa1.74□□□□□ -2.13
NCOA1-202ENST00000348332 KRTAP9-8Q9BYQ0 159 aa1.74□□□□□ -2.13
NCOA1-202ENST00000348332 SPRR2DP22532 72 aa1.74□□□□□ -2.13
NCOA1-202ENST00000348332 LRP2P98164 4655 aa1.74□□□□□ -2.13
NCOA1-202ENST00000348332 KRTAP19-8Q3LI54 63 aa1.73□□□□□ -2.13
NCOA1-202ENST00000348332 LOC100996750A0A140TA64 210 aa1.73□□□□□ -2.13
NCOA1-202ENST00000348332 KRTAP4-6Q9BYQ5 205 aa1.73□□□□□ -2.13
NCOA1-202ENST00000348332 KRTAP9-3Q9BYQ3 159 aa1.71□□□□□ -2.14
NCOA1-202ENST00000348332 INE1O15225 51 aa1.71□□□□□ -2.14
NCOA1-202ENST00000348332 KRTAP19-6Q3LI70 58 aa1.68□□□□□ -2.14
NCOA1-202ENST00000348332 FLGP20930 4061 aaPredicted RBP1.66□□□□□ -2.14
NCOA1-202ENST00000348332 KRTAP19-1Q8IUB9 90 aa1.66□□□□□ -2.14
NCOA1-202ENST00000348332 KRTAP19-4Q3LI73 84 aa1.66□□□□□ -2.14
NCOA1-202ENST00000348332 KRTAP12-4P60329 112 aa1.65□□□□□ -2.14
NCOA1-202ENST00000348332 LPAP08519 4548 aa1.64□□□□□ -2.15
NCOA1-202ENST00000348332 MT1BP07438 61 aa1.62□□□□□ -2.15
NCOA1-202ENST00000348332 LCE3BQ5TA77 95 aa1.61□□□□□ -2.15
NCOA1-202ENST00000348332 KRTAP6-3Q3LI67 103 aa1.6□□□□□ -2.15
NCOA1-202ENST00000348332 MT4P47944 62 aa1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms