RNA–Protein interactions for RNA: ENST00000348332.7

NCOA1-202, Transcript of nuclear receptor coactivator 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene NCOA1, Length 6,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA1-202ENST00000348332 NISCHQ9Y2I1 1504 aa8.65□□□□□ -1.03
NCOA1-202ENST00000348332 CCDC180Q9P1Z9 1646 aa7.72□□□□□ -1.17
NCOA1-202ENST00000348332 DCAF8L2P0C7V8 631 aa7.48□□□□□ -1.21
NCOA1-202ENST00000348332 ABCC9O60706 1549 aa7.44□□□□□ -1.22
NCOA1-202ENST00000348332 RB1CC1Q8TDY2 1594 aa7.33□□□□□ -1.24
NCOA1-202ENST00000348332 NACADO15069 1562 aa7.32□□□□□ -1.24
NCOA1-202ENST00000348332 MYO15BQ96JP2 1530 aa7.26□□□□□ -1.25
NCOA1-202ENST00000348332 DCAF1Q9Y4B6 1507 aa7.23□□□□□ -1.25
NCOA1-202ENST00000348332 ZCCHC6Q5VYS8 1495 aaKnown RBP7.19□□□□□ -1.26
NCOA1-202ENST00000348332 SHROOM4Q9ULL8 1493 aa7.11□□□□□ -1.27
NCOA1-202ENST00000348332 PABPN1Q86U42 306 aaKnown RBP eCLIP6.97□□□□□ -1.29
NCOA1-202ENST00000348332 SCRIBQ14160 1630 aa6.97□□□□□ -1.29
NCOA1-202ENST00000348332 BAZ1AQ9NRL2 1556 aaPredicted RBP6.81□□□□□ -1.32
NCOA1-202ENST00000348332 FAM9AQ8IZU1 332 aaPredicted RBP6.81□□□□□ -1.32
NCOA1-202ENST00000348332 SMARCA2P51531 1590 aa6.81□□□□□ -1.32
NCOA1-202ENST00000348332 EHMT2Q96KQ7 1210 aa6.8□□□□□ -1.32
NCOA1-202ENST00000348332 UNC13AQ9UPW8 1703 aa6.76□□□□□ -1.33
NCOA1-202ENST00000348332 BICRAQ9NZM4 1560 aa6.75□□□□□ -1.33
NCOA1-202ENST00000348332 CECR2Q9BXF3 1484 aa6.75□□□□□ -1.33
NCOA1-202ENST00000348332 EIF4G1Q04637 1599 aaKnown RBP6.74□□□□□ -1.33
NCOA1-202ENST00000348332 BAZ1BQ9UIG0 1483 aaKnown RBP6.73□□□□□ -1.33
NCOA1-202ENST00000348332 NCAPD3P42695 1498 aa6.68□□□□□ -1.34
NCOA1-202ENST00000348332 SMARCA4P51532 1647 aa6.68□□□□□ -1.34
NCOA1-202ENST00000348332 CC2D2AQ9P2K1 1620 aa6.68□□□□□ -1.34
NCOA1-202ENST00000348332 SUPT5HO00267 1087 aaKnown RBP6.67□□□□□ -1.34
NCOA1-202ENST00000348332 HMGXB3Q12766 1538 aa6.66□□□□□ -1.34
NCOA1-202ENST00000348332 ATAD2BQ9ULI0 1458 aa6.64□□□□□ -1.35
NCOA1-202ENST00000348332 PDS5BQ9NTI5 1447 aa6.64□□□□□ -1.35
NCOA1-202ENST00000348332 ERCC6Q03468 1493 aa6.64□□□□□ -1.35
NCOA1-202ENST00000348332 MYT1LQ9UL68 1186 aa6.62□□□□□ -1.35
NCOA1-202ENST00000348332 ATP1B4Q9UN42 357 aaPredicted RBP6.59□□□□□ -1.35
NCOA1-202ENST00000348332 PEG3Q9GZU2 1588 aa6.58□□□□□ -1.36
NCOA1-202ENST00000348332 RSF1Q96T23 1441 aaPredicted RBP6.58□□□□□ -1.36
NCOA1-202ENST00000348332 CHIC1Q5VXU3 224 aa6.58□□□□□ -1.36
NCOA1-202ENST00000348332 TOP2AP11388 1531 aaKnown RBP6.58□□□□□ -1.36
NCOA1-202ENST00000348332 APLP2Q06481 763 aa6.57□□□□□ -1.36
NCOA1-202ENST00000348332 ABCC8Q09428 1581 aa6.56□□□□□ -1.36
NCOA1-202ENST00000348332 MROH2BQ7Z745 1585 aa6.56□□□□□ -1.36
NCOA1-202ENST00000348332 RANGAP1P46060 587 aaPredicted RBP6.55□□□□□ -1.36
NCOA1-202ENST00000348332 CADPSQ9ULU8 1353 aa6.55□□□□□ -1.36
NCOA1-202ENST00000348332 LAMC3Q9Y6N6 1575 aa6.54□□□□□ -1.36
NCOA1-202ENST00000348332 TTBK1Q5TCY1 1321 aaPredicted RBP6.51□□□□□ -1.37
NCOA1-202ENST00000348332 DNAJC5BQ9UF47 199 aa6.5□□□□□ -1.37
NCOA1-202ENST00000348332 CEP164Q9UPV0 1460 aa6.5□□□□□ -1.37
NCOA1-202ENST00000348332 WIZO95785 1651 aa6.47□□□□□ -1.37
NCOA1-202ENST00000348332 CUX2O14529 1486 aa6.47□□□□□ -1.37
NCOA1-202ENST00000348332 MRC2Q9UBG0 1479 aa6.45□□□□□ -1.38
NCOA1-202ENST00000348332 PELP1Q8IZL8 1130 aaKnown RBP6.44□□□□□ -1.38
NCOA1-202ENST00000348332 FANCD2Q9BXW9 1451 aa6.44□□□□□ -1.38
NCOA1-202ENST00000348332 CFTRP13569 1480 aa6.43□□□□□ -1.38
NCOA1-202ENST00000348332 CCDC88BA6NC98 1476 aa6.43□□□□□ -1.38
NCOA1-202ENST00000348332 TRIM41Q8WV44 630 aa6.42□□□□□ -1.38
NCOA1-202ENST00000348332 WRNQ14191 1432 aaPredicted RBP eCLIP6.38□□□□□ -1.39
NCOA1-202ENST00000348332 IFT140Q96RY7 1462 aa6.38□□□□□ -1.39
NCOA1-202ENST00000348332 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.37□□□□□ -1.39
NCOA1-202ENST00000348332 HNRNPUL2Q1KMD3 747 aaKnown RBP6.37□□□□□ -1.39
NCOA1-202ENST00000348332 SLC4A1APQ9BWU0 796 aaKnown RBP6.37□□□□□ -1.39
NCOA1-202ENST00000348332 PRDM2Q13029 1718 aa6.36□□□□□ -1.39
NCOA1-202ENST00000348332 CHMP7Q8WUX9 453 aaPredicted RBP6.34□□□□□ -1.39
NCOA1-202ENST00000348332 DNMBPQ6XZF7 1577 aa6.34□□□□□ -1.39
NCOA1-202ENST00000348332 SOGA1O94964 1423 aa6.34□□□□□ -1.4
NCOA1-202ENST00000348332 EEA1Q15075 1411 aa6.34□□□□□ -1.4
NCOA1-202ENST00000348332 WDR97A6NE52 1622 aa6.33□□□□□ -1.4
NCOA1-202ENST00000348332 KIF27Q86VH2 1401 aa6.33□□□□□ -1.4
NCOA1-202ENST00000348332 FBLN2P98095 1184 aa6.32□□□□□ -1.4
NCOA1-202ENST00000348332 NESP48681 1621 aa6.32□□□□□ -1.4
NCOA1-202ENST00000348332 WDR62O43379 1518 aa6.31□□□□□ -1.4
NCOA1-202ENST00000348332 ERICH6Q7L0X2 663 aa6.31□□□□□ -1.4
NCOA1-202ENST00000348332 OSCARQ8IYS5 282 aa6.3□□□□□ -1.4
NCOA1-202ENST00000348332 PLPPR3Q6T4P5 718 aa6.3□□□□□ -1.4
NCOA1-202ENST00000348332 NPM1P06748 294 aaKnown RBP eCLIP6.3□□□□□ -1.4
NCOA1-202ENST00000348332 TOPBP1Q92547 1522 aa6.29□□□□□ -1.4
NCOA1-202ENST00000348332 POLR3GLQ9BT43 218 aa6.28□□□□□ -1.4
NCOA1-202ENST00000348332 GRIN2BQ13224 1484 aa6.27□□□□□ -1.41
NCOA1-202ENST00000348332 SLC24A1O60721 1099 aa6.27□□□□□ -1.41
NCOA1-202ENST00000348332 KIF21AQ7Z4S6 1674 aa6.26□□□□□ -1.41
NCOA1-202ENST00000348332 FGD5Q6ZNL6 1462 aa6.25□□□□□ -1.41
NCOA1-202ENST00000348332 BCANQ96GW7 911 aa6.25□□□□□ -1.41
NCOA1-202ENST00000348332 MAGI1Q96QZ7 1491 aaPredicted RBP6.24□□□□□ -1.41
NCOA1-202ENST00000348332 GAPVD1Q14C86 1478 aa6.24□□□□□ -1.41
NCOA1-202ENST00000348332 CNGB1Q14028 1251 aaPredicted RBP6.24□□□□□ -1.41
NCOA1-202ENST00000348332 UBTFP17480 764 aaKnown RBP6.24□□□□□ -1.41
NCOA1-202ENST00000348332 CARMIL2Q6F5E8 1435 aa6.23□□□□□ -1.41
NCOA1-202ENST00000348332 THOC2Q8NI27 1593 aaKnown RBP6.23□□□□□ -1.41
NCOA1-202ENST00000348332 TOP2BQ02880 1626 aa6.22□□□□□ -1.41
NCOA1-202ENST00000348332 URB2Q14146 1524 aaKnown RBP6.22□□□□□ -1.41
NCOA1-202ENST00000348332 FHAD1B1AJZ9 1412 aa6.22□□□□□ -1.41
NCOA1-202ENST00000348332 POLA1P09884 1462 aaPredicted RBP6.22□□□□□ -1.41
NCOA1-202ENST00000348332 CSRNP3Q8WYN3 585 aa6.22□□□□□ -1.41
NCOA1-202ENST00000348332 ABCA10Q8WWZ4 1543 aa6.21□□□□□ -1.42
NCOA1-202ENST00000348332 SYNJ1O43426 1573 aa6.21□□□□□ -1.42
NCOA1-202ENST00000348332 CDK11AQ9UQ88 783 aaPredicted RBP6.2□□□□□ -1.42
NCOA1-202ENST00000348332 TDRD9Q8NDG6 1382 aaKnown RBP6.2□□□□□ -1.42
NCOA1-202ENST00000348332 GOLGA3Q08378 1498 aa6.19□□□□□ -1.42
NCOA1-202ENST00000348332 BIVM-ERCC5R4GMW8 1640 aa6.19□□□□□ -1.42
NCOA1-202ENST00000348332 ERICH3Q5RHP9 1530 aa6.19□□□□□ -1.42
NCOA1-202ENST00000348332 CARMIL1Q5VZK9 1371 aa6.19□□□□□ -1.42
NCOA1-202ENST00000348332 CCER1Q8TC90 406 aaPredicted RBP6.18□□□□□ -1.42
NCOA1-202ENST00000348332 SYNJ2O15056 1496 aa6.18□□□□□ -1.42
NCOA1-202ENST00000348332 CUX1P39880 1505 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms