RNA–Protein interactions for RNA: ENST00000344749.9

TCF3-202, Transcript of transcription factor 3, humanhuman

TSL 5 BASIC

Gene TCF3, Length 4,289 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-202ENST00000344749 TNP1P09430 55 aa6.36□□□□□ -1.39
TCF3-202ENST00000344749 KRTAP10-6P60371 365 aaPredicted RBP6.36□□□□□ -1.39
TCF3-202ENST00000344749 KRTAP4-5Q9BYR2 181 aa6.36□□□□□ -1.39
TCF3-202ENST00000344749 DNAH8Q96JB1 4490 aa6.34□□□□□ -1.4
TCF3-202ENST00000344749 DNAH17Q9UFH2 4485 aa6.33□□□□□ -1.4
TCF3-202ENST00000344749 LYSTQ99698 3801 aa6.32□□□□□ -1.4
TCF3-202ENST00000344749 KRTAP12-1P59990 96 aa6.3□□□□□ -1.4
TCF3-202ENST00000344749 DYNC1H1Q14204 4646 aaKnown RBP6.29□□□□□ -1.4
TCF3-202ENST00000344749 KRTAP10-10P60014 251 aa6.28□□□□□ -1.4
TCF3-202ENST00000344749 DNAH2Q9P225 4427 aa6.28□□□□□ -1.4
TCF3-202ENST00000344749 KRTAP3-3Q9BYR6 98 aa6.27□□□□□ -1.41
TCF3-202ENST00000344749 KRTAP3-2Q9BYR7 98 aa6.21□□□□□ -1.42
TCF3-202ENST00000344749 MYCBP2O75592 4640 aa6.19□□□□□ -1.42
TCF3-202ENST00000344749 ALMS1Q8TCU4 4167 aa6.18□□□□□ -1.42
TCF3-202ENST00000344749 RYR1P21817 5038 aa6.16□□□□□ -1.42
TCF3-202ENST00000344749 CMYA5Q8N3K9 4069 aa6.16□□□□□ -1.42
TCF3-202ENST00000344749 DNAH3Q8TD57 4116 aa6.16□□□□□ -1.42
TCF3-202ENST00000344749 KIAA1109Q2LD37 5005 aa6.14□□□□□ -1.43
TCF3-202ENST00000344749 DNAH7Q8WXX0 4024 aa6.14□□□□□ -1.43
TCF3-202ENST00000344749 PP632Q6XCG6 107 aa6.14□□□□□ -1.43
TCF3-202ENST00000344749 FRAS1Q86XX4 4008 aa6.11□□□□□ -1.43
TCF3-202ENST00000344749 VPS13BQ7Z7G8 4022 aa6.1□□□□□ -1.43
TCF3-202ENST00000344749 DNAH6Q9C0G6 4158 aa6.1□□□□□ -1.43
TCF3-202ENST00000344749 KRTAP15-1Q3LI76 137 aa6.1□□□□□ -1.43
TCF3-202ENST00000344749 DYNC2H1Q8NCM8 4307 aaKnown RBP6.09□□□□□ -1.43
TCF3-202ENST00000344749 SACSQ9NZJ4 4579 aa6.09□□□□□ -1.44
TCF3-202ENST00000344749 LRP1Q07954 4544 aaKnown RBP6.02□□□□□ -1.45
TCF3-202ENST00000344749 FAT3Q8TDW7 4589 aa6.01□□□□□ -1.45
TCF3-202ENST00000344749 FAT2Q9NYQ8 4349 aa6□□□□□ -1.45
TCF3-202ENST00000344749 RYR3Q15413 4870 aa5.99□□□□□ -1.45
TCF3-202ENST00000344749 HYDINQ4G0P3 5121 aa5.98□□□□□ -1.45
TCF3-202ENST00000344749 HECTD4Q9Y4D8 3996 aa5.97□□□□□ -1.45
TCF3-202ENST00000344749 APOBP04114 4563 aaKnown RBP5.97□□□□□ -1.45
TCF3-202ENST00000344749 LORP23490 312 aaPredicted RBP5.96□□□□□ -1.46
TCF3-202ENST00000344749 PKHD1P08F94 4074 aa5.91□□□□□ -1.46
TCF3-202ENST00000344749 KRTAP17-1Q9BYP8 105 aa5.9□□□□□ -1.47
TCF3-202ENST00000344749 KRTAP4-1Q9BYQ7 146 aa5.87□□□□□ -1.47
TCF3-202ENST00000344749 PRO2289Q9P1D8 64 aa5.85□□□□□ -1.47
TCF3-202ENST00000344749 RYR2Q92736 4967 aa5.76□□□□□ -1.49
TCF3-202ENST00000344749 KMT2CQ8NEZ4 4911 aaKnown RBP5.75□□□□□ -1.49
TCF3-202ENST00000344749 LRP2P98164 4655 aa5.75□□□□□ -1.49
TCF3-202ENST00000344749 HERC2O95714 4834 aa5.64□□□□□ -1.51
TCF3-202ENST00000344749 PKD1P98161 4303 aa5.61□□□□□ -1.51
TCF3-202ENST00000344749 HSPG2P98160 4391 aa5.58□□□□□ -1.52
TCF3-202ENST00000344749 KRTAP10-12P60413 245 aa5.51□□□□□ -1.53
TCF3-202ENST00000344749 LCE3AQ5TA76 89 aa5.5□□□□□ -1.53
TCF3-202ENST00000344749 LPAP08519 4548 aa5.49□□□□□ -1.53
TCF3-202ENST00000344749 MT1HP80294 61 aa5.46□□□□□ -1.53
TCF3-202ENST00000344749 INE1O15225 51 aa5.44□□□□□ -1.54
TCF3-202ENST00000344749 EPPK1P58107 5090 aaKnown RBP5.42□□□□□ -1.54
TCF3-202ENST00000344749 MT2AP02795 61 aa5.41□□□□□ -1.54
TCF3-202ENST00000344749 KRTAP12-3P60328 96 aa5.4□□□□□ -1.54
TCF3-202ENST00000344749 MT1FP04733 61 aa5.37□□□□□ -1.55
TCF3-202ENST00000344749 SPRR2GQ9BYE4 73 aa5.33□□□□□ -1.56
TCF3-202ENST00000344749 ABCA13Q86UQ4 5058 aa5.31□□□□□ -1.56
TCF3-202ENST00000344749 PKHD1L1Q86WI1 4243 aa5.3□□□□□ -1.56
TCF3-202ENST00000344749 BIRC6Q9NR09 4857 aa5.29□□□□□ -1.56
TCF3-202ENST00000344749 KRTAP23-1A1A580 65 aa5.28□□□□□ -1.56
TCF3-202ENST00000344749 TNXBP22105 4242 aa5.27□□□□□ -1.57
TCF3-202ENST00000344749 PCLOQ9Y6V0 5065 aa5.27□□□□□ -1.57
TCF3-202ENST00000344749 KRTAP19-1Q8IUB9 90 aa5.23□□□□□ -1.57
TCF3-202ENST00000344749 CRCT1Q9UGL9 99 aa5.22□□□□□ -1.57
TCF3-202ENST00000344749 HERC1Q15751 4861 aa5.2□□□□□ -1.58
TCF3-202ENST00000344749 LCE2CQ5TA81 110 aa5.14□□□□□ -1.59
TCF3-202ENST00000344749 MUC2Q02817 5179 aa5.13□□□□□ -1.59
TCF3-202ENST00000344749 RNF213Q63HN8 5207 aa5.08□□□□□ -1.6
TCF3-202ENST00000344749 KRTAP19-2Q3LHN2 52 aa5.08□□□□□ -1.6
TCF3-202ENST00000344749 MUC17Q685J3 4493 aa5.06□□□□□ -1.6
TCF3-202ENST00000344749 KRTAP9-8Q9BYQ0 159 aa5.06□□□□□ -1.6
TCF3-202ENST00000344749 KRTAP10-7P60409 375 aaPredicted RBP5.02□□□□□ -1.61
TCF3-202ENST00000344749 FAT4Q6V0I7 4981 aa5.02□□□□□ -1.61
TCF3-202ENST00000344749 KRTAP8-1Q8IUC2 63 aa5□□□□□ -1.61
TCF3-202ENST00000344749 KRTAP19-8Q3LI54 63 aa5□□□□□ -1.61
TCF3-202ENST00000344749 KRTAP19-5Q3LI72 72 aa4.99□□□□□ -1.61
TCF3-202ENST00000344749 MT1BP07438 61 aa4.99□□□□□ -1.61
TCF3-202ENST00000344749 FSIP2Q5CZC0 6907 aa4.98□□□□□ -1.61
TCF3-202ENST00000344749 UBR4Q5T4S7 5183 aa4.98□□□□□ -1.61
TCF3-202ENST00000344749 MT1XP80297 61 aa4.97□□□□□ -1.61
TCF3-202ENST00000344749 FLGP20930 4061 aaPredicted RBP4.96□□□□□ -1.62
TCF3-202ENST00000344749 KRTAP10-5P60370 271 aa4.93□□□□□ -1.62
TCF3-202ENST00000344749 KRTAP9-3Q9BYQ3 159 aa4.87□□□□□ -1.63
TCF3-202ENST00000344749 KRTAP4-8A0A0G2JLE6 195 aa4.85□□□□□ -1.63
TCF3-202ENST00000344749 KRTAP4-8Q9BYQ9 185 aa4.85□□□□□ -1.63
TCF3-202ENST00000344749 LCE3CQ5T5A8 94 aa4.81□□□□□ -1.64
TCF3-202ENST00000344749 HMCN2Q8NDA2 5059 aa4.81□□□□□ -1.64
TCF3-202ENST00000344749 LCE2BO14633 110 aa4.75□□□□□ -1.65
TCF3-202ENST00000344749 SPRR2FQ96RM1 72 aa4.74□□□□□ -1.65
TCF3-202ENST00000344749 SPRR5A0A1B0GTR4 108 aa4.68□□□□□ -1.66
TCF3-202ENST00000344749 SYNE1Q8NF91 8797 aaKnown RBP4.61□□□□□ -1.67
TCF3-202ENST00000344749 KRTAP4-7Q9BYR0 210 aa4.59□□□□□ -1.67
TCF3-202ENST00000344749 MT1GP13640 62 aa4.52□□□□□ -1.69
TCF3-202ENST00000344749 OBSCNQ5VST9 7968 aa4.49□□□□□ -1.69
TCF3-202ENST00000344749 USH2AO75445 5202 aa4.48□□□□□ -1.69
TCF3-202ENST00000344749 LCE2AQ5TA79 106 aaPredicted RBP4.45□□□□□ -1.7
TCF3-202ENST00000344749 MT1LQ93083 61 aa4.4□□□□□ -1.71
TCF3-202ENST00000344749 MT1EP04732 61 aa4.39□□□□□ -1.71
TCF3-202ENST00000344749 KRTAP19-4Q3LI73 84 aa4.39□□□□□ -1.71
TCF3-202ENST00000344749 LCE3BQ5TA77 95 aa4.38□□□□□ -1.71
TCF3-202ENST00000344749 DSTQ03001 7570 aaKnown RBP4.34□□□□□ -1.71
TCF3-202ENST00000344749 KMT2DO14686 5537 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms