RNA–Protein interactions for RNA: ENST00000341259.6

SH2B3-201, Transcript of SH2B adaptor protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2B3, Length 5,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2B3-201ENST00000341259 KRTAP15-1Q3LI76 137 aa8.62□□□□□ -1.03
SH2B3-201ENST00000341259 VPS13DQ5THJ4 4388 aa8.58□□□□□ -1.04
SH2B3-201ENST00000341259 DNAH17Q9UFH2 4485 aa8.56□□□□□ -1.04
SH2B3-201ENST00000341259 DNAH10Q8IVF4 4471 aa8.49□□□□□ -1.05
SH2B3-201ENST00000341259 DNAH11Q96DT5 4516 aa8.49□□□□□ -1.05
SH2B3-201ENST00000341259 LORP23490 312 aaPredicted RBP8.41□□□□□ -1.06
SH2B3-201ENST00000341259 KRTAP10-12P60413 245 aa8.41□□□□□ -1.06
SH2B3-201ENST00000341259 DNAH3Q8TD57 4116 aa8.41□□□□□ -1.06
SH2B3-201ENST00000341259 STARD9Q9P2P6 4700 aa8.36□□□□□ -1.07
SH2B3-201ENST00000341259 DNAH2Q9P225 4427 aa8.36□□□□□ -1.07
SH2B3-201ENST00000341259 DNHD1Q96M86 4753 aa8.34□□□□□ -1.07
SH2B3-201ENST00000341259 DYNC1H1Q14204 4646 aaKnown RBP8.33□□□□□ -1.08
SH2B3-201ENST00000341259 LRP1BQ9NZR2 4599 aa8.28□□□□□ -1.08
SH2B3-201ENST00000341259 INE1O15225 51 aa8.27□□□□□ -1.09
SH2B3-201ENST00000341259 DYNC2H1Q8NCM8 4307 aaKnown RBP8.23□□□□□ -1.09
SH2B3-201ENST00000341259 KRTAP4-1Q9BYQ7 146 aa8.22□□□□□ -1.09
SH2B3-201ENST00000341259 ANK2Q01484 3957 aa8.22□□□□□ -1.09
SH2B3-201ENST00000341259 SACSQ9NZJ4 4579 aa8.2□□□□□ -1.1
SH2B3-201ENST00000341259 KRTAP23-1A1A580 65 aa8.19□□□□□ -1.1
SH2B3-201ENST00000341259 FAT2Q9NYQ8 4349 aa8.19□□□□□ -1.1
SH2B3-201ENST00000341259 LCE3AQ5TA76 89 aa8.19□□□□□ -1.1
SH2B3-201ENST00000341259 KRTAP12-3P60328 96 aa8.17□□□□□ -1.1
SH2B3-201ENST00000341259 DNAH8Q96JB1 4490 aa8.16□□□□□ -1.1
SH2B3-201ENST00000341259 FAT1Q14517 4588 aa8.12□□□□□ -1.11
SH2B3-201ENST00000341259 PRKDCP78527 4128 aaKnown RBP8.12□□□□□ -1.11
SH2B3-201ENST00000341259 CMYA5Q8N3K9 4069 aa8.06□□□□□ -1.12
SH2B3-201ENST00000341259 KMT2AQ03164 3969 aa8.03□□□□□ -1.12
SH2B3-201ENST00000341259 MT1HP80294 61 aa8□□□□□ -1.13
SH2B3-201ENST00000341259 CRCT1Q9UGL9 99 aa7.99□□□□□ -1.13
SH2B3-201ENST00000341259 DNAH6Q9C0G6 4158 aa7.98□□□□□ -1.13
SH2B3-201ENST00000341259 RYR1P21817 5038 aa7.94□□□□□ -1.14
SH2B3-201ENST00000341259 VPS13BQ7Z7G8 4022 aa7.9□□□□□ -1.14
SH2B3-201ENST00000341259 APOBP04114 4563 aaKnown RBP7.86□□□□□ -1.15
SH2B3-201ENST00000341259 MT2AP02795 61 aa7.86□□□□□ -1.15
SH2B3-201ENST00000341259 SPRR2GQ9BYE4 73 aa7.81□□□□□ -1.16
SH2B3-201ENST00000341259 DNAH7Q8WXX0 4024 aa7.79□□□□□ -1.16
SH2B3-201ENST00000341259 FRAS1Q86XX4 4008 aa7.74□□□□□ -1.17
SH2B3-201ENST00000341259 KRTAP17-1Q9BYP8 105 aa7.74□□□□□ -1.17
SH2B3-201ENST00000341259 KRTAP8-1Q8IUC2 63 aa7.73□□□□□ -1.17
SH2B3-201ENST00000341259 MT1FP04733 61 aa7.72□□□□□ -1.17
SH2B3-201ENST00000341259 HECTD4Q9Y4D8 3996 aa7.71□□□□□ -1.17
SH2B3-201ENST00000341259 LYSTQ99698 3801 aa7.71□□□□□ -1.18
SH2B3-201ENST00000341259 RYR3Q15413 4870 aa7.7□□□□□ -1.18
SH2B3-201ENST00000341259 RYR2Q92736 4967 aa7.56□□□□□ -1.2
SH2B3-201ENST00000341259 FAT3Q8TDW7 4589 aa7.54□□□□□ -1.2
SH2B3-201ENST00000341259 KIAA1109Q2LD37 5005 aa7.51□□□□□ -1.21
SH2B3-201ENST00000341259 MYCBP2O75592 4640 aa7.49□□□□□ -1.21
SH2B3-201ENST00000341259 LRP1Q07954 4544 aaKnown RBP7.47□□□□□ -1.21
SH2B3-201ENST00000341259 HYDINQ4G0P3 5121 aa7.42□□□□□ -1.22
SH2B3-201ENST00000341259 KRTAP19-5Q3LI72 72 aa7.4□□□□□ -1.22
SH2B3-201ENST00000341259 KRTAP10-5P60370 271 aa7.38□□□□□ -1.23
SH2B3-201ENST00000341259 HSPG2P98160 4391 aa7.35□□□□□ -1.23
SH2B3-201ENST00000341259 KRTAP19-1Q8IUB9 90 aa7.34□□□□□ -1.24
SH2B3-201ENST00000341259 KRTAP19-8Q3LI54 63 aa7.3□□□□□ -1.24
SH2B3-201ENST00000341259 LCE3CQ5T5A8 94 aa7.24□□□□□ -1.25
SH2B3-201ENST00000341259 KRTAP10-7P60409 375 aaPredicted RBP7.21□□□□□ -1.25
SH2B3-201ENST00000341259 SPRR2FQ96RM1 72 aa7.2□□□□□ -1.26
SH2B3-201ENST00000341259 PKD1P98161 4303 aa7.19□□□□□ -1.26
SH2B3-201ENST00000341259 PKHD1P08F94 4074 aa7.18□□□□□ -1.26
SH2B3-201ENST00000341259 HERC1Q15751 4861 aa7.17□□□□□ -1.26
SH2B3-201ENST00000341259 HERC2O95714 4834 aa7.15□□□□□ -1.26
SH2B3-201ENST00000341259 BIRC6Q9NR09 4857 aa7.14□□□□□ -1.27
SH2B3-201ENST00000341259 MT1XP80297 61 aa7.13□□□□□ -1.27
SH2B3-201ENST00000341259 KRTAP9-8Q9BYQ0 159 aa7.12□□□□□ -1.27
SH2B3-201ENST00000341259 LCE2CQ5TA81 110 aa7.1□□□□□ -1.27
SH2B3-201ENST00000341259 MT1BP07438 61 aa7.09□□□□□ -1.27
SH2B3-201ENST00000341259 PKHD1L1Q86WI1 4243 aa7.07□□□□□ -1.28
SH2B3-201ENST00000341259 KRTAP19-4Q3LI73 84 aa7.03□□□□□ -1.28
SH2B3-201ENST00000341259 LRP2P98164 4655 aa7.03□□□□□ -1.28
SH2B3-201ENST00000341259 TNXBP22105 4242 aa7.02□□□□□ -1.29
SH2B3-201ENST00000341259 LPAP08519 4548 aa7□□□□□ -1.29
SH2B3-201ENST00000341259 KRTAP9-3Q9BYQ3 159 aa6.95□□□□□ -1.3
SH2B3-201ENST00000341259 KMT2CQ8NEZ4 4911 aaKnown RBP6.88□□□□□ -1.31
SH2B3-201ENST00000341259 KRTAP19-2Q3LHN2 52 aa6.85□□□□□ -1.31
SH2B3-201ENST00000341259 PCLOQ9Y6V0 5065 aa6.83□□□□□ -1.32
SH2B3-201ENST00000341259 KRTAP4-8A0A0G2JLE6 195 aa6.8□□□□□ -1.32
SH2B3-201ENST00000341259 KRTAP4-8Q9BYQ9 185 aa6.8□□□□□ -1.32
SH2B3-201ENST00000341259 SPRR2EP22531 72 aa6.75□□□□□ -1.33
SH2B3-201ENST00000341259 SPRR2BP35325 72 aa6.75□□□□□ -1.33
SH2B3-201ENST00000341259 SPRR2AP35326 72 aa6.75□□□□□ -1.33
SH2B3-201ENST00000341259 SPRR5A0A1B0GTR4 108 aa6.7□□□□□ -1.34
SH2B3-201ENST00000341259 MUC17Q685J3 4493 aa6.69□□□□□ -1.34
SH2B3-201ENST00000341259 MT1GP13640 62 aa6.68□□□□□ -1.34
SH2B3-201ENST00000341259 FLGP20930 4061 aaPredicted RBP6.65□□□□□ -1.35
SH2B3-201ENST00000341259 LCE2BO14633 110 aa6.62□□□□□ -1.35
SH2B3-201ENST00000341259 EPPK1P58107 5090 aaKnown RBP6.6□□□□□ -1.35
SH2B3-201ENST00000341259 LCE3BQ5TA77 95 aa6.59□□□□□ -1.36
SH2B3-201ENST00000341259 ABCA13Q86UQ4 5058 aa6.57□□□□□ -1.36
SH2B3-201ENST00000341259 SPRR2DP22532 72 aa6.53□□□□□ -1.36
SH2B3-201ENST00000341259 MT1LQ93083 61 aa6.41□□□□□ -1.38
SH2B3-201ENST00000341259 KRTAP19-3Q7Z4W3 81 aa6.4□□□□□ -1.39
SH2B3-201ENST00000341259 KRTAP4-7Q9BYR0 210 aa6.39□□□□□ -1.39
SH2B3-201ENST00000341259 MT1EP04732 61 aa6.38□□□□□ -1.39
SH2B3-201ENST00000341259 KRTAP12-4P60329 112 aa6.36□□□□□ -1.39
SH2B3-201ENST00000341259 KRTAP19-6Q3LI70 58 aa6.26□□□□□ -1.41
SH2B3-201ENST00000341259 FAT4Q6V0I7 4981 aa6.26□□□□□ -1.41
SH2B3-201ENST00000341259 RNF213Q63HN8 5207 aa6.22□□□□□ -1.41
SH2B3-201ENST00000341259 LCE3DQ9BYE3 92 aa6.18□□□□□ -1.42
SH2B3-201ENST00000341259 LCE2AQ5TA79 106 aaPredicted RBP6.18□□□□□ -1.42
SH2B3-201ENST00000341259 MT1MQ8N339 61 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 144.4 ms