RNA–Protein interactions for RNA: ENST00000341165.10

NBR1-201, Transcript of NBR1, autophagy cargo receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NBR1, Length 4,656 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBR1-201ENST00000341165 COX6B2Q6YFQ2 88 aa4.28□□□□□ -1.72
NBR1-201ENST00000341165 VPS13BQ7Z7G8 4022 aa4.27□□□□□ -1.73
NBR1-201ENST00000341165 H0YAA0 97 aa4.26□□□□□ -1.73
NBR1-201ENST00000341165 SACSQ9NZJ4 4579 aa4.26□□□□□ -1.73
NBR1-201ENST00000341165 KRTAP10-8P60410 259 aa4.25□□□□□ -1.73
NBR1-201ENST00000341165 DYNC1H1Q14204 4646 aaKnown RBP4.25□□□□□ -1.73
NBR1-201ENST00000341165 HYDINQ4G0P3 5121 aa4.24□□□□□ -1.73
NBR1-201ENST00000341165 R4GN34 69 aa4.22□□□□□ -1.73
NBR1-201ENST00000341165 S4R3F8 94 aa4.2□□□□□ -1.74
NBR1-201ENST00000341165 M0QZ58 72 aa4.18□□□□□ -1.74
NBR1-201ENST00000341165 XP32Q5T750 250 aa4.17□□□□□ -1.74
NBR1-201ENST00000341165 KRTAP3-1Q9BYR8 98 aa4.17□□□□□ -1.74
NBR1-201ENST00000341165 APOBP04114 4563 aaKnown RBP4.15□□□□□ -1.74
NBR1-201ENST00000341165 PKHD1L1Q86WI1 4243 aa4.13□□□□□ -1.75
NBR1-201ENST00000341165 PKHD1P08F94 4074 aa4.12□□□□□ -1.75
NBR1-201ENST00000341165 FAT1Q14517 4588 aa4.12□□□□□ -1.75
NBR1-201ENST00000341165 TPRXLQ17RH7 258 aa4.11□□□□□ -1.75
NBR1-201ENST00000341165 RYR2Q92736 4967 aa4.1□□□□□ -1.75
NBR1-201ENST00000341165 M0R2T5 61 aa4.07□□□□□ -1.76
NBR1-201ENST00000341165 MT1HL1P0DM35 61 aa4.06□□□□□ -1.76
NBR1-201ENST00000341165 KRTAP15-1Q3LI76 137 aa4.03□□□□□ -1.76
NBR1-201ENST00000341165 PP632Q6XCG6 107 aa4.02□□□□□ -1.77
NBR1-201ENST00000341165 FAT3Q8TDW7 4589 aa4.01□□□□□ -1.77
NBR1-201ENST00000341165 KRTAP3-3Q9BYR6 98 aa4□□□□□ -1.77
NBR1-201ENST00000341165 KRTAP10-6P60371 365 aaPredicted RBP3.97□□□□□ -1.77
NBR1-201ENST00000341165 TNXBP22105 4242 aa3.97□□□□□ -1.77
NBR1-201ENST00000341165 HSPG2P98160 4391 aa3.97□□□□□ -1.77
NBR1-201ENST00000341165 RYR1P21817 5038 aa3.96□□□□□ -1.78
NBR1-201ENST00000341165 KRTAP3-2Q9BYR7 98 aa3.94□□□□□ -1.78
NBR1-201ENST00000341165 KMT2CQ8NEZ4 4911 aaKnown RBP3.93□□□□□ -1.78
NBR1-201ENST00000341165 LRP1Q07954 4544 aaKnown RBP3.92□□□□□ -1.78
NBR1-201ENST00000341165 TNP1P09430 55 aa3.9□□□□□ -1.79
NBR1-201ENST00000341165 KRTAP17-1Q9BYP8 105 aa3.9□□□□□ -1.79
NBR1-201ENST00000341165 KRTAP13-4Q3LI77 160 aa3.89□□□□□ -1.79
NBR1-201ENST00000341165 PRO2289Q9P1D8 64 aa3.88□□□□□ -1.79
NBR1-201ENST00000341165 RYR3Q15413 4870 aa3.87□□□□□ -1.79
NBR1-201ENST00000341165 KRTAP12-2P59991 146 aa3.86□□□□□ -1.79
NBR1-201ENST00000341165 KRTAP4-5Q9BYR2 181 aa3.84□□□□□ -1.8
NBR1-201ENST00000341165 KIAA1109Q2LD37 5005 aa3.83□□□□□ -1.8
NBR1-201ENST00000341165 KRTAP12-1P59990 96 aa3.81□□□□□ -1.8
NBR1-201ENST00000341165 MYCBP2O75592 4640 aa3.81□□□□□ -1.8
NBR1-201ENST00000341165 INE1O15225 51 aa3.76□□□□□ -1.81
NBR1-201ENST00000341165 LRP2P98164 4655 aa3.69□□□□□ -1.82
NBR1-201ENST00000341165 KRTAP4-1Q9BYQ7 146 aa3.69□□□□□ -1.82
NBR1-201ENST00000341165 EPPK1P58107 5090 aaKnown RBP3.68□□□□□ -1.82
NBR1-201ENST00000341165 KRTAP23-1A1A580 65 aa3.67□□□□□ -1.82
NBR1-201ENST00000341165 LPAP08519 4548 aa3.63□□□□□ -1.83
NBR1-201ENST00000341165 MUC17Q685J3 4493 aa3.62□□□□□ -1.83
NBR1-201ENST00000341165 LORP23490 312 aaPredicted RBP3.61□□□□□ -1.83
NBR1-201ENST00000341165 HERC2O95714 4834 aa3.6□□□□□ -1.83
NBR1-201ENST00000341165 KRTAP19-2Q3LHN2 52 aa3.58□□□□□ -1.84
NBR1-201ENST00000341165 BIRC6Q9NR09 4857 aa3.57□□□□□ -1.84
NBR1-201ENST00000341165 ABCA13Q86UQ4 5058 aa3.56□□□□□ -1.84
NBR1-201ENST00000341165 FLGP20930 4061 aaPredicted RBP3.48□□□□□ -1.85
NBR1-201ENST00000341165 KRTAP10-10P60014 251 aa3.46□□□□□ -1.85
NBR1-201ENST00000341165 HERC1Q15751 4861 aa3.44□□□□□ -1.86
NBR1-201ENST00000341165 SPRR2GQ9BYE4 73 aa3.44□□□□□ -1.86
NBR1-201ENST00000341165 LCE2CQ5TA81 110 aa3.42□□□□□ -1.86
NBR1-201ENST00000341165 MT1HP80294 61 aa3.41□□□□□ -1.86
NBR1-201ENST00000341165 HMCN2Q8NDA2 5059 aa3.37□□□□□ -1.87
NBR1-201ENST00000341165 PCLOQ9Y6V0 5065 aa3.35□□□□□ -1.87
NBR1-201ENST00000341165 MT2AP02795 61 aa3.35□□□□□ -1.87
NBR1-201ENST00000341165 KRTAP19-1Q8IUB9 90 aa3.34□□□□□ -1.87
NBR1-201ENST00000341165 MT1FP04733 61 aa3.32□□□□□ -1.88
NBR1-201ENST00000341165 KRTAP19-8Q3LI54 63 aa3.29□□□□□ -1.88
NBR1-201ENST00000341165 KRTAP9-8Q9BYQ0 159 aa3.28□□□□□ -1.88
NBR1-201ENST00000341165 MUC2Q02817 5179 aa3.26□□□□□ -1.89
NBR1-201ENST00000341165 LCE3AQ5TA76 89 aa3.24□□□□□ -1.89
NBR1-201ENST00000341165 RNF213Q63HN8 5207 aa3.22□□□□□ -1.89
NBR1-201ENST00000341165 KRTAP10-12P60413 245 aa3.2□□□□□ -1.9
NBR1-201ENST00000341165 MT1BP07438 61 aa3.19□□□□□ -1.9
NBR1-201ENST00000341165 KRTAP9-6A0A140TA67 174 aa3.17□□□□□ -1.9
NBR1-201ENST00000341165 KRTAP8-1Q8IUC2 63 aa3.17□□□□□ -1.9
NBR1-201ENST00000341165 FAT4Q6V0I7 4981 aa3.17□□□□□ -1.9
NBR1-201ENST00000341165 KRTAP9-3Q9BYQ3 159 aa3.17□□□□□ -1.9
NBR1-201ENST00000341165 SPRR5A0A1B0GTR4 108 aa3.16□□□□□ -1.9
NBR1-201ENST00000341165 KRTAP10-5P60370 271 aa3.16□□□□□ -1.9
NBR1-201ENST00000341165 MT1XP80297 61 aa3.16□□□□□ -1.9
NBR1-201ENST00000341165 KRTAP9-2Q9BYQ4 174 aa3.15□□□□□ -1.91
NBR1-201ENST00000341165 KRTAP12-3P60328 96 aa3.14□□□□□ -1.91
NBR1-201ENST00000341165 CRCT1Q9UGL9 99 aa3.12□□□□□ -1.91
NBR1-201ENST00000341165 UBR4Q5T4S7 5183 aa3.11□□□□□ -1.91
NBR1-201ENST00000341165 KRTAP10-7P60409 375 aaPredicted RBP3.06□□□□□ -1.92
NBR1-201ENST00000341165 LCE2BO14633 110 aa3.01□□□□□ -1.93
NBR1-201ENST00000341165 LCE2AQ5TA79 106 aaPredicted RBP3.01□□□□□ -1.93
NBR1-201ENST00000341165 KRTAP19-4Q3LI73 84 aa3□□□□□ -1.93
NBR1-201ENST00000341165 KRTAP19-5Q3LI72 72 aa2.97□□□□□ -1.93
NBR1-201ENST00000341165 LCE3CQ5T5A8 94 aa2.93□□□□□ -1.94
NBR1-201ENST00000341165 LCE2DQ5TA82 110 aaPredicted RBP2.9□□□□□ -1.95
NBR1-201ENST00000341165 KRTAP9-7A8MTY7 169 aa2.89□□□□□ -1.95
NBR1-201ENST00000341165 SYNE1Q8NF91 8797 aaKnown RBP2.89□□□□□ -1.95
NBR1-201ENST00000341165 KRTAP4-8A0A0G2JLE6 195 aa2.84□□□□□ -1.95
NBR1-201ENST00000341165 KRTAP4-8Q9BYQ9 185 aa2.84□□□□□ -1.95
NBR1-201ENST00000341165 KRTAP12-4P60329 112 aa2.82□□□□□ -1.96
NBR1-201ENST00000341165 KRTAP19-6Q3LI70 58 aa2.81□□□□□ -1.96
NBR1-201ENST00000341165 KRTAP19-7Q3SYF9 63 aa2.79□□□□□ -1.96
NBR1-201ENST00000341165 SPRR2FQ96RM1 72 aa2.77□□□□□ -1.97
NBR1-201ENST00000341165 MT1EP04732 61 aa2.77□□□□□ -1.97
NBR1-201ENST00000341165 MT1LQ93083 61 aa2.76□□□□□ -1.97
NBR1-201ENST00000341165 USH2AO75445 5202 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 126.7 ms