RNA–Protein interactions for RNA: ENST00000340001.8

ABCA9-201, Transcript of ATP binding cassette subfamily A member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA9, Length 6,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA9-201ENST00000340001 KRTAP10-12P60413 245 aa3.31□□□□□ -1.88
ABCA9-201ENST00000340001 ALMS1Q8TCU4 4167 aa3.31□□□□□ -1.88
ABCA9-201ENST00000340001 DNAH1Q9P2D7 4330 aa3.31□□□□□ -1.88
ABCA9-201ENST00000340001 KRTAP8-1Q8IUC2 63 aa3.28□□□□□ -1.88
ABCA9-201ENST00000340001 MT1HL1P0DM35 61 aa3.28□□□□□ -1.88
ABCA9-201ENST00000340001 KRTAP3-3Q9BYR6 98 aa3.28□□□□□ -1.88
ABCA9-201ENST00000340001 ANK2Q01484 3957 aa3.27□□□□□ -1.89
ABCA9-201ENST00000340001 KMT2AQ03164 3969 aa3.26□□□□□ -1.89
ABCA9-201ENST00000340001 CMYA5Q8N3K9 4069 aa3.25□□□□□ -1.89
ABCA9-201ENST00000340001 PLECQ15149 4684 aaKnown RBP3.25□□□□□ -1.89
ABCA9-201ENST00000340001 KRTAP3-2Q9BYR7 98 aa3.24□□□□□ -1.89
ABCA9-201ENST00000340001 DNAH3Q8TD57 4116 aa3.24□□□□□ -1.89
ABCA9-201ENST00000340001 DNAH2Q9P225 4427 aa3.21□□□□□ -1.9
ABCA9-201ENST00000340001 KRTAP10-4P60372 401 aaPredicted RBP3.19□□□□□ -1.9
ABCA9-201ENST00000340001 STARD9Q9P2P6 4700 aa3.18□□□□□ -1.9
ABCA9-201ENST00000340001 LCE3AQ5TA76 89 aa3.16□□□□□ -1.9
ABCA9-201ENST00000340001 DNAH11Q96DT5 4516 aa3.15□□□□□ -1.9
ABCA9-201ENST00000340001 DNAH7Q8WXX0 4024 aa3.15□□□□□ -1.9
ABCA9-201ENST00000340001 SPRR2FQ96RM1 72 aa3.15□□□□□ -1.91
ABCA9-201ENST00000340001 KRTAP12-3P60328 96 aa3.15□□□□□ -1.91
ABCA9-201ENST00000340001 DNAH8Q96JB1 4490 aa3.13□□□□□ -1.91
ABCA9-201ENST00000340001 VPS13BQ7Z7G8 4022 aa3.13□□□□□ -1.91
ABCA9-201ENST00000340001 DNAH5Q8TE73 4624 aa3.12□□□□□ -1.91
ABCA9-201ENST00000340001 PRKDCP78527 4128 aaKnown RBP3.1□□□□□ -1.91
ABCA9-201ENST00000340001 VPS13DQ5THJ4 4388 aa3.1□□□□□ -1.91
ABCA9-201ENST00000340001 DNAH17Q9UFH2 4485 aa3.09□□□□□ -1.92
ABCA9-201ENST00000340001 DNAH6Q9C0G6 4158 aa3.09□□□□□ -1.92
ABCA9-201ENST00000340001 FAT2Q9NYQ8 4349 aa3.06□□□□□ -1.92
ABCA9-201ENST00000340001 LRP1BQ9NZR2 4599 aa3.04□□□□□ -1.92
ABCA9-201ENST00000340001 KRTAP4-1Q9BYQ7 146 aa3.04□□□□□ -1.92
ABCA9-201ENST00000340001 HECTD4Q9Y4D8 3996 aa3.03□□□□□ -1.92
ABCA9-201ENST00000340001 DYNC2H1Q8NCM8 4307 aaKnown RBP3.02□□□□□ -1.93
ABCA9-201ENST00000340001 FAT1Q14517 4588 aa3.01□□□□□ -1.93
ABCA9-201ENST00000340001 SPRR2EP22531 72 aa3□□□□□ -1.93
ABCA9-201ENST00000340001 SPRR2BP35325 72 aa3□□□□□ -1.93
ABCA9-201ENST00000340001 SPRR2AP35326 72 aa3□□□□□ -1.93
ABCA9-201ENST00000340001 INE1O15225 51 aa2.98□□□□□ -1.93
ABCA9-201ENST00000340001 SPRR5A0A1B0GTR4 108 aa2.97□□□□□ -1.93
ABCA9-201ENST00000340001 SACSQ9NZJ4 4579 aa2.96□□□□□ -1.93
ABCA9-201ENST00000340001 DYNC1H1Q14204 4646 aaKnown RBP2.94□□□□□ -1.94
ABCA9-201ENST00000340001 DNHD1Q96M86 4753 aa2.93□□□□□ -1.94
ABCA9-201ENST00000340001 MT1HP80294 61 aa2.92□□□□□ -1.94
ABCA9-201ENST00000340001 APOBP04114 4563 aaKnown RBP2.89□□□□□ -1.95
ABCA9-201ENST00000340001 SPRR2DP22532 72 aa2.88□□□□□ -1.95
ABCA9-201ENST00000340001 LPAP08519 4548 aa2.87□□□□□ -1.95
ABCA9-201ENST00000340001 LCE3BQ5TA77 95 aa2.85□□□□□ -1.95
ABCA9-201ENST00000340001 KRTAP17-1Q9BYP8 105 aa2.85□□□□□ -1.95
ABCA9-201ENST00000340001 FAT3Q8TDW7 4589 aa2.85□□□□□ -1.95
ABCA9-201ENST00000340001 PKHD1P08F94 4074 aa2.85□□□□□ -1.95
ABCA9-201ENST00000340001 KRTAP19-5Q3LI72 72 aa2.84□□□□□ -1.95
ABCA9-201ENST00000340001 MT2AP02795 61 aa2.83□□□□□ -1.96
ABCA9-201ENST00000340001 MYCBP2O75592 4640 aa2.83□□□□□ -1.96
ABCA9-201ENST00000340001 LRP1Q07954 4544 aaKnown RBP2.83□□□□□ -1.96
ABCA9-201ENST00000340001 MT1FP04733 61 aa2.83□□□□□ -1.96
ABCA9-201ENST00000340001 HYDINQ4G0P3 5121 aa2.8□□□□□ -1.96
ABCA9-201ENST00000340001 RYR1P21817 5038 aa2.8□□□□□ -1.96
ABCA9-201ENST00000340001 KRTAP23-1A1A580 65 aa2.8□□□□□ -1.96
ABCA9-201ENST00000340001 HSPG2P98160 4391 aa2.77□□□□□ -1.97
ABCA9-201ENST00000340001 LCE2BO14633 110 aa2.76□□□□□ -1.97
ABCA9-201ENST00000340001 SPRR2GQ9BYE4 73 aa2.74□□□□□ -1.97
ABCA9-201ENST00000340001 MT1GP13640 62 aa2.74□□□□□ -1.97
ABCA9-201ENST00000340001 MT4P47944 62 aa2.74□□□□□ -1.97
ABCA9-201ENST00000340001 PKD1P98161 4303 aa2.73□□□□□ -1.97
ABCA9-201ENST00000340001 PKHD1L1Q86WI1 4243 aa2.7□□□□□ -1.98
ABCA9-201ENST00000340001 TNXBP22105 4242 aa2.7□□□□□ -1.98
ABCA9-201ENST00000340001 LCE3CQ5T5A8 94 aa2.68□□□□□ -1.98
ABCA9-201ENST00000340001 LCE2CQ5TA81 110 aa2.68□□□□□ -1.98
ABCA9-201ENST00000340001 LCE2DQ5TA82 110 aaPredicted RBP2.68□□□□□ -1.98
ABCA9-201ENST00000340001 KRTAP12-4P60329 112 aa2.67□□□□□ -1.98
ABCA9-201ENST00000340001 RYR3Q15413 4870 aa2.67□□□□□ -1.98
ABCA9-201ENST00000340001 PCLOQ9Y6V0 5065 aa2.67□□□□□ -1.98
ABCA9-201ENST00000340001 KRTAP4-8A0A0G2JLE6 195 aa2.64□□□□□ -1.99
ABCA9-201ENST00000340001 KRTAP4-8Q9BYQ9 185 aa2.64□□□□□ -1.99
ABCA9-201ENST00000340001 LRP2P98164 4655 aa2.63□□□□□ -1.99
ABCA9-201ENST00000340001 KRTAP19-1Q8IUB9 90 aa2.62□□□□□ -1.99
ABCA9-201ENST00000340001 LCE1BQ5T7P3 118 aa2.59□□□□□ -1.99
ABCA9-201ENST00000340001 MT1XP80297 61 aa2.59□□□□□ -2
ABCA9-201ENST00000340001 KMT2CQ8NEZ4 4911 aaKnown RBP2.55□□□□□ -2
ABCA9-201ENST00000340001 MT1BP07438 61 aa2.53□□□□□ -2
ABCA9-201ENST00000340001 LCE1DQ5T752 114 aa2.53□□□□□ -2
ABCA9-201ENST00000340001 KRTAP9-8Q9BYQ0 159 aa2.53□□□□□ -2
ABCA9-201ENST00000340001 KRTAP9-2Q9BYQ4 174 aa2.53□□□□□ -2
ABCA9-201ENST00000340001 KRTAP4-7Q9BYR0 210 aa2.52□□□□□ -2.01
ABCA9-201ENST00000340001 RYR2Q92736 4967 aa2.52□□□□□ -2.01
ABCA9-201ENST00000340001 KIAA1109Q2LD37 5005 aa2.5□□□□□ -2.01
ABCA9-201ENST00000340001 LCE3EQ5T5B0 92 aa2.5□□□□□ -2.01
ABCA9-201ENST00000340001 KRTAP19-8Q3LI54 63 aa2.5□□□□□ -2.01
ABCA9-201ENST00000340001 FLGP20930 4061 aaPredicted RBP2.5□□□□□ -2.01
ABCA9-201ENST00000340001 KRTAP19-4Q3LI73 84 aa2.48□□□□□ -2.01
ABCA9-201ENST00000340001 LCE4AQ5TA78 99 aa2.48□□□□□ -2.01
ABCA9-201ENST00000340001 LCE5AQ5TCM9 118 aa2.45□□□□□ -2.02
ABCA9-201ENST00000340001 LCE3DQ9BYE3 92 aa2.45□□□□□ -2.02
ABCA9-201ENST00000340001 KRTAP9-3Q9BYQ3 159 aa2.45□□□□□ -2.02
ABCA9-201ENST00000340001 HERC1Q15751 4861 aa2.45□□□□□ -2.02
ABCA9-201ENST00000340001 SYNE2Q8WXH0 6885 aaKnown RBP2.43□□□□□ -2.02
ABCA9-201ENST00000340001 KRTAP9-6A0A140TA67 174 aa2.42□□□□□ -2.02
ABCA9-201ENST00000340001 HERC2O95714 4834 aa2.41□□□□□ -2.02
ABCA9-201ENST00000340001 FSIP2Q5CZC0 6907 aa2.41□□□□□ -2.02
ABCA9-201ENST00000340001 LOC100996750A0A140TA64 210 aa2.41□□□□□ -2.02
ABCA9-201ENST00000340001 LCE1CQ5T751 118 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms