RNA–Protein interactions for RNA: ENST00000339490.7

PHKA1-201, Transcript of phosphorylase kinase regulatory subunit alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PHKA1, Length 6,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHKA1-201ENST00000339490 KRTAP23-1A1A580 65 aa7.33□□□□□ -1.24
PHKA1-201ENST00000339490 CSMD3Q7Z407 3707 aa7.29□□□□□ -1.24
PHKA1-201ENST00000339490 DNAH9Q9NYC9 4486 aa7.16□□□□□ -1.26
PHKA1-201ENST00000339490 DNAH5Q8TE73 4624 aa7.12□□□□□ -1.27
PHKA1-201ENST00000339490 KRTAP8-1Q8IUC2 63 aa7.11□□□□□ -1.27
PHKA1-201ENST00000339490 KRTAP10-5P60370 271 aa7.11□□□□□ -1.27
PHKA1-201ENST00000339490 DNAH1Q9P2D7 4330 aa7.07□□□□□ -1.28
PHKA1-201ENST00000339490 KRTAP4-1Q9BYQ7 146 aa7.07□□□□□ -1.28
PHKA1-201ENST00000339490 DNAH10Q8IVF4 4471 aa7.02□□□□□ -1.29
PHKA1-201ENST00000339490 AKAP9Q99996 3911 aa6.98□□□□□ -1.29
PHKA1-201ENST00000339490 MT1HP80294 61 aa6.95□□□□□ -1.3
PHKA1-201ENST00000339490 ZNF469Q96JG9 3925 aaPredicted RBP6.92□□□□□ -1.3
PHKA1-201ENST00000339490 PLECQ15149 4684 aaKnown RBP6.92□□□□□ -1.3
PHKA1-201ENST00000339490 DNAH11Q96DT5 4516 aa6.9□□□□□ -1.3
PHKA1-201ENST00000339490 DNAH2Q9P225 4427 aa6.86□□□□□ -1.31
PHKA1-201ENST00000339490 MT2AP02795 61 aa6.85□□□□□ -1.31
PHKA1-201ENST00000339490 DNAH17Q9UFH2 4485 aa6.81□□□□□ -1.32
PHKA1-201ENST00000339490 SPRR2GQ9BYE4 73 aa6.79□□□□□ -1.32
PHKA1-201ENST00000339490 VPS13DQ5THJ4 4388 aa6.77□□□□□ -1.33
PHKA1-201ENST00000339490 FAT1Q14517 4588 aa6.76□□□□□ -1.33
PHKA1-201ENST00000339490 MT1FP04733 61 aa6.73□□□□□ -1.33
PHKA1-201ENST00000339490 DYNC1H1Q14204 4646 aaKnown RBP6.7□□□□□ -1.34
PHKA1-201ENST00000339490 LRP1BQ9NZR2 4599 aa6.69□□□□□ -1.34
PHKA1-201ENST00000339490 KRTAP19-5Q3LI72 72 aa6.69□□□□□ -1.34
PHKA1-201ENST00000339490 DNAH8Q96JB1 4490 aa6.66□□□□□ -1.34
PHKA1-201ENST00000339490 DNAH3Q8TD57 4116 aa6.63□□□□□ -1.35
PHKA1-201ENST00000339490 FAT2Q9NYQ8 4349 aa6.62□□□□□ -1.35
PHKA1-201ENST00000339490 SPRR2FQ96RM1 72 aa6.61□□□□□ -1.35
PHKA1-201ENST00000339490 DNHD1Q96M86 4753 aa6.61□□□□□ -1.35
PHKA1-201ENST00000339490 SACSQ9NZJ4 4579 aa6.6□□□□□ -1.35
PHKA1-201ENST00000339490 STARD9Q9P2P6 4700 aa6.59□□□□□ -1.36
PHKA1-201ENST00000339490 LCE3CQ5T5A8 94 aa6.57□□□□□ -1.36
PHKA1-201ENST00000339490 DYNC2H1Q8NCM8 4307 aaKnown RBP6.56□□□□□ -1.36
PHKA1-201ENST00000339490 KRTAP10-7P60409 375 aaPredicted RBP6.55□□□□□ -1.36
PHKA1-201ENST00000339490 RYR1P21817 5038 aa6.54□□□□□ -1.36
PHKA1-201ENST00000339490 ANK2Q01484 3957 aa6.53□□□□□ -1.36
PHKA1-201ENST00000339490 APOBP04114 4563 aaKnown RBP6.45□□□□□ -1.38
PHKA1-201ENST00000339490 VPS13BQ7Z7G8 4022 aa6.42□□□□□ -1.38
PHKA1-201ENST00000339490 KMT2AQ03164 3969 aa6.39□□□□□ -1.39
PHKA1-201ENST00000339490 PRKDCP78527 4128 aaKnown RBP6.31□□□□□ -1.4
PHKA1-201ENST00000339490 KRTAP19-1Q8IUB9 90 aa6.29□□□□□ -1.4
PHKA1-201ENST00000339490 LYSTQ99698 3801 aa6.27□□□□□ -1.41
PHKA1-201ENST00000339490 KRTAP17-1Q9BYP8 105 aa6.26□□□□□ -1.41
PHKA1-201ENST00000339490 KRTAP19-8Q3LI54 63 aa6.25□□□□□ -1.41
PHKA1-201ENST00000339490 FRAS1Q86XX4 4008 aa6.24□□□□□ -1.41
PHKA1-201ENST00000339490 KRTAP19-4Q3LI73 84 aa6.21□□□□□ -1.42
PHKA1-201ENST00000339490 RYR3Q15413 4870 aa6.21□□□□□ -1.42
PHKA1-201ENST00000339490 DNAH7Q8WXX0 4024 aa6.2□□□□□ -1.42
PHKA1-201ENST00000339490 MYCBP2O75592 4640 aa6.19□□□□□ -1.42
PHKA1-201ENST00000339490 MT1XP80297 61 aa6.19□□□□□ -1.42
PHKA1-201ENST00000339490 SPRR2EP22531 72 aa6.18□□□□□ -1.42
PHKA1-201ENST00000339490 SPRR2BP35325 72 aa6.18□□□□□ -1.42
PHKA1-201ENST00000339490 SPRR2AP35326 72 aa6.18□□□□□ -1.42
PHKA1-201ENST00000339490 LCE3BQ5TA77 95 aa6.18□□□□□ -1.42
PHKA1-201ENST00000339490 FAT3Q8TDW7 4589 aa6.17□□□□□ -1.42
PHKA1-201ENST00000339490 MT1GP13640 62 aa6.12□□□□□ -1.43
PHKA1-201ENST00000339490 DNAH6Q9C0G6 4158 aa6.09□□□□□ -1.43
PHKA1-201ENST00000339490 MT1BP07438 61 aa6.09□□□□□ -1.43
PHKA1-201ENST00000339490 CMYA5Q8N3K9 4069 aa6.09□□□□□ -1.43
PHKA1-201ENST00000339490 LRP1Q07954 4544 aaKnown RBP6.07□□□□□ -1.44
PHKA1-201ENST00000339490 KRTAP4-8A0A0G2JLE6 195 aa6.04□□□□□ -1.44
PHKA1-201ENST00000339490 KRTAP4-8Q9BYQ9 185 aa6.04□□□□□ -1.44
PHKA1-201ENST00000339490 KRTAP9-8Q9BYQ0 159 aa6.03□□□□□ -1.44
PHKA1-201ENST00000339490 KRTAP12-4P60329 112 aa6.01□□□□□ -1.45
PHKA1-201ENST00000339490 HECTD4Q9Y4D8 3996 aa5.98□□□□□ -1.45
PHKA1-201ENST00000339490 SPRR2DP22532 72 aa5.97□□□□□ -1.45
PHKA1-201ENST00000339490 KIAA1109Q2LD37 5005 aa5.95□□□□□ -1.46
PHKA1-201ENST00000339490 LCE2BO14633 110 aa5.93□□□□□ -1.46
PHKA1-201ENST00000339490 RYR2Q92736 4967 aa5.92□□□□□ -1.46
PHKA1-201ENST00000339490 KRTAP9-3Q9BYQ3 159 aa5.9□□□□□ -1.47
PHKA1-201ENST00000339490 LCE2CQ5TA81 110 aa5.88□□□□□ -1.47
PHKA1-201ENST00000339490 SPRR5A0A1B0GTR4 108 aa5.85□□□□□ -1.47
PHKA1-201ENST00000339490 PKD1P98161 4303 aa5.79□□□□□ -1.48
PHKA1-201ENST00000339490 HERC1Q15751 4861 aa5.79□□□□□ -1.48
PHKA1-201ENST00000339490 HSPG2P98160 4391 aa5.78□□□□□ -1.48
PHKA1-201ENST00000339490 LCE3DQ9BYE3 92 aa5.78□□□□□ -1.48
PHKA1-201ENST00000339490 KRTAP4-7Q9BYR0 210 aa5.74□□□□□ -1.49
PHKA1-201ENST00000339490 LRP2P98164 4655 aa5.74□□□□□ -1.49
PHKA1-201ENST00000339490 LPAP08519 4548 aa5.72□□□□□ -1.49
PHKA1-201ENST00000339490 HERC2O95714 4834 aa5.67□□□□□ -1.5
PHKA1-201ENST00000339490 LCE3EQ5T5B0 92 aa5.67□□□□□ -1.5
PHKA1-201ENST00000339490 KRTAP19-3Q7Z4W3 81 aa5.66□□□□□ -1.5
PHKA1-201ENST00000339490 PKHD1L1Q86WI1 4243 aa5.66□□□□□ -1.5
PHKA1-201ENST00000339490 HYDINQ4G0P3 5121 aa5.65□□□□□ -1.51
PHKA1-201ENST00000339490 MT1LQ93083 61 aa5.63□□□□□ -1.51
PHKA1-201ENST00000339490 PKHD1P08F94 4074 aa5.57□□□□□ -1.52
PHKA1-201ENST00000339490 PCLOQ9Y6V0 5065 aa5.57□□□□□ -1.52
PHKA1-201ENST00000339490 MT1EP04732 61 aa5.57□□□□□ -1.52
PHKA1-201ENST00000339490 KRTAP19-2Q3LHN2 52 aa5.55□□□□□ -1.52
PHKA1-201ENST00000339490 BIRC6Q9NR09 4857 aa5.51□□□□□ -1.53
PHKA1-201ENST00000339490 TNXBP22105 4242 aa5.46□□□□□ -1.54
PHKA1-201ENST00000339490 LCE2DQ5TA82 110 aaPredicted RBP5.46□□□□□ -1.54
PHKA1-201ENST00000339490 KMT2CQ8NEZ4 4911 aaKnown RBP5.46□□□□□ -1.54
PHKA1-201ENST00000339490 LOC100996750A0A140TA64 210 aa5.42□□□□□ -1.54
PHKA1-201ENST00000339490 MT1MQ8N339 61 aa5.41□□□□□ -1.54
PHKA1-201ENST00000339490 FLGP20930 4061 aaPredicted RBP5.38□□□□□ -1.55
PHKA1-201ENST00000339490 KRTAP4-3Q9BYR4 195 aa5.36□□□□□ -1.55
PHKA1-201ENST00000339490 MT4P47944 62 aa5.34□□□□□ -1.55
PHKA1-201ENST00000339490 MUC17Q685J3 4493 aa5.33□□□□□ -1.56
PHKA1-201ENST00000339490 MT3P25713 68 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms