RNA–Protein interactions for RNA: ENST00000338745.10

SATB1-201, Transcript of SATB homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SATB1, Length 7,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-201ENST00000338745 FRAS1Q86XX4 4008 aa7.08□□□□□ -1.28
SATB1-201ENST00000338745 KRTAP23-1A1A580 65 aa7.07□□□□□ -1.28
SATB1-201ENST00000338745 KRTAP10-5P60370 271 aa7.05□□□□□ -1.28
SATB1-201ENST00000338745 FBN1P35555 2871 aaKnown RBP7.03□□□□□ -1.28
SATB1-201ENST00000338745 COL7A1Q02388 2944 aa7□□□□□ -1.29
SATB1-201ENST00000338745 DNAH2Q9P225 4427 aa6.99□□□□□ -1.29
SATB1-201ENST00000338745 KRTAP10-4P60372 401 aaPredicted RBP6.98□□□□□ -1.29
SATB1-201ENST00000338745 CMYA5Q8N3K9 4069 aa6.96□□□□□ -1.29
SATB1-201ENST00000338745 DNAH1Q9P2D7 4330 aa6.96□□□□□ -1.3
SATB1-201ENST00000338745 OTOGQ6ZRI0 2925 aa6.92□□□□□ -1.3
SATB1-201ENST00000338745 ANK2Q01484 3957 aa6.91□□□□□ -1.3
SATB1-201ENST00000338745 DNAH9Q9NYC9 4486 aa6.86□□□□□ -1.31
SATB1-201ENST00000338745 DNAH10Q8IVF4 4471 aa6.85□□□□□ -1.31
SATB1-201ENST00000338745 KRTAP8-1Q8IUC2 63 aa6.84□□□□□ -1.31
SATB1-201ENST00000338745 DNAH7Q8WXX0 4024 aa6.82□□□□□ -1.32
SATB1-201ENST00000338745 KMT2AQ03164 3969 aa6.72□□□□□ -1.33
SATB1-201ENST00000338745 DNAH6Q9C0G6 4158 aa6.71□□□□□ -1.33
SATB1-201ENST00000338745 DNAH8Q96JB1 4490 aa6.71□□□□□ -1.34
SATB1-201ENST00000338745 VPS13BQ7Z7G8 4022 aa6.69□□□□□ -1.34
SATB1-201ENST00000338745 DNAH11Q96DT5 4516 aa6.62□□□□□ -1.35
SATB1-201ENST00000338745 LYSTQ99698 3801 aa6.62□□□□□ -1.35
SATB1-201ENST00000338745 FAT2Q9NYQ8 4349 aa6.56□□□□□ -1.36
SATB1-201ENST00000338745 KRTAP4-1Q9BYQ7 146 aa6.56□□□□□ -1.36
SATB1-201ENST00000338745 PRKDCP78527 4128 aaKnown RBP6.54□□□□□ -1.36
SATB1-201ENST00000338745 MT1HP80294 61 aa6.51□□□□□ -1.37
SATB1-201ENST00000338745 HECTD4Q9Y4D8 3996 aa6.49□□□□□ -1.37
SATB1-201ENST00000338745 KRTAP19-5Q3LI72 72 aa6.48□□□□□ -1.37
SATB1-201ENST00000338745 DYNC2H1Q8NCM8 4307 aaKnown RBP6.46□□□□□ -1.37
SATB1-201ENST00000338745 DNAH17Q9UFH2 4485 aa6.44□□□□□ -1.38
SATB1-201ENST00000338745 PLECQ15149 4684 aaKnown RBP6.43□□□□□ -1.38
SATB1-201ENST00000338745 VPS13DQ5THJ4 4388 aa6.43□□□□□ -1.38
SATB1-201ENST00000338745 LCE3CQ5T5A8 94 aa6.41□□□□□ -1.38
SATB1-201ENST00000338745 SPRR2GQ9BYE4 73 aa6.37□□□□□ -1.39
SATB1-201ENST00000338745 MT2AP02795 61 aa6.34□□□□□ -1.39
SATB1-201ENST00000338745 KRTAP10-7P60409 375 aaPredicted RBP6.34□□□□□ -1.39
SATB1-201ENST00000338745 STARD9Q9P2P6 4700 aa6.31□□□□□ -1.4
SATB1-201ENST00000338745 SPRR2FQ96RM1 72 aa6.31□□□□□ -1.4
SATB1-201ENST00000338745 MT1FP04733 61 aa6.25□□□□□ -1.41
SATB1-201ENST00000338745 DNAH5Q8TE73 4624 aa6.25□□□□□ -1.41
SATB1-201ENST00000338745 LRP1BQ9NZR2 4599 aa6.15□□□□□ -1.43
SATB1-201ENST00000338745 LCE3BQ5TA77 95 aa6.11□□□□□ -1.43
SATB1-201ENST00000338745 SACSQ9NZJ4 4579 aa6.02□□□□□ -1.45
SATB1-201ENST00000338745 SPRR2EP22531 72 aa5.97□□□□□ -1.45
SATB1-201ENST00000338745 SPRR2BP35325 72 aa5.97□□□□□ -1.45
SATB1-201ENST00000338745 SPRR2AP35326 72 aa5.97□□□□□ -1.45
SATB1-201ENST00000338745 MT1GP13640 62 aa5.93□□□□□ -1.46
SATB1-201ENST00000338745 FAT1Q14517 4588 aa5.92□□□□□ -1.46
SATB1-201ENST00000338745 PKD1P98161 4303 aa5.91□□□□□ -1.46
SATB1-201ENST00000338745 KRTAP12-4P60329 112 aa5.9□□□□□ -1.47
SATB1-201ENST00000338745 APOBP04114 4563 aaKnown RBP5.85□□□□□ -1.47
SATB1-201ENST00000338745 DYNC1H1Q14204 4646 aaKnown RBP5.82□□□□□ -1.48
SATB1-201ENST00000338745 MT1XP80297 61 aa5.82□□□□□ -1.48
SATB1-201ENST00000338745 PKHD1L1Q86WI1 4243 aa5.8□□□□□ -1.48
SATB1-201ENST00000338745 KRTAP19-4Q3LI73 84 aa5.8□□□□□ -1.48
SATB1-201ENST00000338745 FLGP20930 4061 aaPredicted RBP5.78□□□□□ -1.48
SATB1-201ENST00000338745 KRTAP19-1Q8IUB9 90 aa5.76□□□□□ -1.49
SATB1-201ENST00000338745 SPRR2DP22532 72 aa5.76□□□□□ -1.49
SATB1-201ENST00000338745 KRTAP19-8Q3LI54 63 aa5.74□□□□□ -1.49
SATB1-201ENST00000338745 TNXBP22105 4242 aa5.72□□□□□ -1.49
SATB1-201ENST00000338745 LCE2BO14633 110 aa5.71□□□□□ -1.5
SATB1-201ENST00000338745 KRTAP4-8A0A0G2JLE6 195 aa5.68□□□□□ -1.5
SATB1-201ENST00000338745 KRTAP4-8Q9BYQ9 185 aa5.68□□□□□ -1.5
SATB1-201ENST00000338745 FAT3Q8TDW7 4589 aa5.68□□□□□ -1.5
SATB1-201ENST00000338745 PKHD1P08F94 4074 aa5.67□□□□□ -1.5
SATB1-201ENST00000338745 LPAP08519 4548 aa5.65□□□□□ -1.51
SATB1-201ENST00000338745 LCE3DQ9BYE3 92 aa5.63□□□□□ -1.51
SATB1-201ENST00000338745 HSPG2P98160 4391 aa5.62□□□□□ -1.51
SATB1-201ENST00000338745 MT1BP07438 61 aa5.6□□□□□ -1.51
SATB1-201ENST00000338745 SPRR5A0A1B0GTR4 108 aa5.59□□□□□ -1.52
SATB1-201ENST00000338745 KRTAP17-1Q9BYP8 105 aa5.58□□□□□ -1.52
SATB1-201ENST00000338745 KRTAP9-8Q9BYQ0 159 aa5.54□□□□□ -1.52
SATB1-201ENST00000338745 LCE3EQ5T5B0 92 aa5.49□□□□□ -1.53
SATB1-201ENST00000338745 KRTAP4-7Q9BYR0 210 aa5.46□□□□□ -1.54
SATB1-201ENST00000338745 LRP1Q07954 4544 aaKnown RBP5.46□□□□□ -1.54
SATB1-201ENST00000338745 KRTAP9-3Q9BYQ3 159 aa5.4□□□□□ -1.55
SATB1-201ENST00000338745 MYCBP2O75592 4640 aa5.34□□□□□ -1.55
SATB1-201ENST00000338745 PRM1P04553 51 aa5.33□□□□□ -1.56
SATB1-201ENST00000338745 LCE2CQ5TA81 110 aa5.31□□□□□ -1.56
SATB1-201ENST00000338745 KRTAP19-3Q7Z4W3 81 aa5.31□□□□□ -1.56
SATB1-201ENST00000338745 MT1LQ93083 61 aa5.29□□□□□ -1.56
SATB1-201ENST00000338745 LOC100996750A0A140TA64 210 aa5.27□□□□□ -1.57
SATB1-201ENST00000338745 MUC17Q685J3 4493 aa5.26□□□□□ -1.57
SATB1-201ENST00000338745 LCE2DQ5TA82 110 aaPredicted RBP5.23□□□□□ -1.57
SATB1-201ENST00000338745 RYR1P21817 5038 aa5.22□□□□□ -1.57
SATB1-201ENST00000338745 MT1EP04732 61 aa5.21□□□□□ -1.57
SATB1-201ENST00000338745 MT4P47944 62 aa5.19□□□□□ -1.58
SATB1-201ENST00000338745 DNHD1Q96M86 4753 aa5.14□□□□□ -1.59
SATB1-201ENST00000338745 KRTAP4-3Q9BYR4 195 aa5.11□□□□□ -1.59
SATB1-201ENST00000338745 RYR3Q15413 4870 aa5.1□□□□□ -1.59
SATB1-201ENST00000338745 MT1MQ8N339 61 aa5.07□□□□□ -1.6
SATB1-201ENST00000338745 LCE1BQ5T7P3 118 aa5.05□□□□□ -1.6
SATB1-201ENST00000338745 MT3P25713 68 aa5.04□□□□□ -1.6
SATB1-201ENST00000338745 LRP2P98164 4655 aa5.02□□□□□ -1.61
SATB1-201ENST00000338745 HYDINQ4G0P3 5121 aa5.02□□□□□ -1.61
SATB1-201ENST00000338745 LCE1DQ5T752 114 aa5□□□□□ -1.61
SATB1-201ENST00000338745 KRTAP4-9Q9BYQ8 210 aa4.94□□□□□ -1.62
SATB1-201ENST00000338745 KRTAP19-2Q3LHN2 52 aa4.91□□□□□ -1.62
SATB1-201ENST00000338745 KRTAP19-6Q3LI70 58 aa4.77□□□□□ -1.65
SATB1-201ENST00000338745 KRTAP2-3P0C7H8 128 aa4.73□□□□□ -1.65
SATB1-201ENST00000338745 KRTAP2-4Q9BYR9 128 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms