RNA–Protein interactions for RNA: ENST00000338074.6

EPB41L1-202, Transcript of erythrocyte membrane protein band 4.1 like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene EPB41L1, Length 6,266 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L1-202ENST00000338074 KRTAP10-4P60372 401 aaPredicted RBP5.91□□□□□ -1.46
EPB41L1-202ENST00000338074 ZNF469Q96JG9 3925 aaPredicted RBP5.88□□□□□ -1.47
EPB41L1-202ENST00000338074 INE1O15225 51 aa5.82□□□□□ -1.48
EPB41L1-202ENST00000338074 KRTAP10-5P60370 271 aa5.79□□□□□ -1.48
EPB41L1-202ENST00000338074 DNAH9Q9NYC9 4486 aa5.78□□□□□ -1.48
EPB41L1-202ENST00000338074 DNAH1Q9P2D7 4330 aa5.73□□□□□ -1.49
EPB41L1-202ENST00000338074 KRTAP8-1Q8IUC2 63 aa5.71□□□□□ -1.5
EPB41L1-202ENST00000338074 DNAH10Q8IVF4 4471 aa5.7□□□□□ -1.5
EPB41L1-202ENST00000338074 KRTAP4-1Q9BYQ7 146 aa5.65□□□□□ -1.5
EPB41L1-202ENST00000338074 DNAH5Q8TE73 4624 aa5.64□□□□□ -1.51
EPB41L1-202ENST00000338074 PLECQ15149 4684 aaKnown RBP5.59□□□□□ -1.51
EPB41L1-202ENST00000338074 DNAH2Q9P225 4427 aa5.58□□□□□ -1.52
EPB41L1-202ENST00000338074 DNAH11Q96DT5 4516 aa5.54□□□□□ -1.52
EPB41L1-202ENST00000338074 MT1HP80294 61 aa5.51□□□□□ -1.53
EPB41L1-202ENST00000338074 ANK2Q01484 3957 aa5.49□□□□□ -1.53
EPB41L1-202ENST00000338074 FRAS1Q86XX4 4008 aa5.42□□□□□ -1.54
EPB41L1-202ENST00000338074 DNAH3Q8TD57 4116 aa5.42□□□□□ -1.54
EPB41L1-202ENST00000338074 DNAH8Q96JB1 4490 aa5.41□□□□□ -1.54
EPB41L1-202ENST00000338074 KRTAP23-1A1A580 65 aa5.4□□□□□ -1.55
EPB41L1-202ENST00000338074 MT2AP02795 61 aa5.39□□□□□ -1.55
EPB41L1-202ENST00000338074 KMT2AQ03164 3969 aa5.39□□□□□ -1.55
EPB41L1-202ENST00000338074 STARD9Q9P2P6 4700 aa5.39□□□□□ -1.55
EPB41L1-202ENST00000338074 SPRR2FQ96RM1 72 aa5.38□□□□□ -1.55
EPB41L1-202ENST00000338074 DNAH17Q9UFH2 4485 aa5.37□□□□□ -1.55
EPB41L1-202ENST00000338074 LRP1BQ9NZR2 4599 aa5.37□□□□□ -1.55
EPB41L1-202ENST00000338074 VPS13BQ7Z7G8 4022 aa5.36□□□□□ -1.55
EPB41L1-202ENST00000338074 KRTAP19-5Q3LI72 72 aa5.35□□□□□ -1.55
EPB41L1-202ENST00000338074 FAT2Q9NYQ8 4349 aa5.35□□□□□ -1.55
EPB41L1-202ENST00000338074 VPS13DQ5THJ4 4388 aa5.35□□□□□ -1.55
EPB41L1-202ENST00000338074 FAT1Q14517 4588 aa5.34□□□□□ -1.55
EPB41L1-202ENST00000338074 MT1FP04733 61 aa5.34□□□□□ -1.55
EPB41L1-202ENST00000338074 DYNC1H1Q14204 4646 aaKnown RBP5.29□□□□□ -1.56
EPB41L1-202ENST00000338074 LYSTQ99698 3801 aa5.28□□□□□ -1.56
EPB41L1-202ENST00000338074 DNHD1Q96M86 4753 aa5.27□□□□□ -1.57
EPB41L1-202ENST00000338074 SACSQ9NZJ4 4579 aa5.27□□□□□ -1.57
EPB41L1-202ENST00000338074 KRTAP10-7P60409 375 aaPredicted RBP5.22□□□□□ -1.57
EPB41L1-202ENST00000338074 DYNC2H1Q8NCM8 4307 aaKnown RBP5.21□□□□□ -1.58
EPB41L1-202ENST00000338074 PRKDCP78527 4128 aaKnown RBP5.2□□□□□ -1.58
EPB41L1-202ENST00000338074 SPRR2GQ9BYE4 73 aa5.19□□□□□ -1.58
EPB41L1-202ENST00000338074 RYR1P21817 5038 aa5.18□□□□□ -1.58
EPB41L1-202ENST00000338074 CMYA5Q8N3K9 4069 aa5.17□□□□□ -1.58
EPB41L1-202ENST00000338074 LCE3CQ5T5A8 94 aa5.14□□□□□ -1.59
EPB41L1-202ENST00000338074 APOBP04114 4563 aaKnown RBP5.13□□□□□ -1.59
EPB41L1-202ENST00000338074 DNAH7Q8WXX0 4024 aa5.09□□□□□ -1.59
EPB41L1-202ENST00000338074 KRTAP17-1Q9BYP8 105 aa5.08□□□□□ -1.6
EPB41L1-202ENST00000338074 DNAH6Q9C0G6 4158 aa5.07□□□□□ -1.6
EPB41L1-202ENST00000338074 LCE3BQ5TA77 95 aa5.07□□□□□ -1.6
EPB41L1-202ENST00000338074 SPRR2EP22531 72 aa5.05□□□□□ -1.6
EPB41L1-202ENST00000338074 SPRR2BP35325 72 aa5.05□□□□□ -1.6
EPB41L1-202ENST00000338074 SPRR2AP35326 72 aa5.05□□□□□ -1.6
EPB41L1-202ENST00000338074 MYCBP2O75592 4640 aa5□□□□□ -1.61
EPB41L1-202ENST00000338074 MT1GP13640 62 aa4.98□□□□□ -1.61
EPB41L1-202ENST00000338074 FAT3Q8TDW7 4589 aa4.94□□□□□ -1.62
EPB41L1-202ENST00000338074 HECTD4Q9Y4D8 3996 aa4.94□□□□□ -1.62
EPB41L1-202ENST00000338074 KRTAP4-8A0A0G2JLE6 195 aa4.92□□□□□ -1.62
EPB41L1-202ENST00000338074 KRTAP4-8Q9BYQ9 185 aa4.92□□□□□ -1.62
EPB41L1-202ENST00000338074 RYR3Q15413 4870 aa4.9□□□□□ -1.62
EPB41L1-202ENST00000338074 LRP1Q07954 4544 aaKnown RBP4.9□□□□□ -1.62
EPB41L1-202ENST00000338074 LPAP08519 4548 aa4.89□□□□□ -1.63
EPB41L1-202ENST00000338074 KRTAP19-1Q8IUB9 90 aa4.86□□□□□ -1.63
EPB41L1-202ENST00000338074 SPRR2DP22532 72 aa4.86□□□□□ -1.63
EPB41L1-202ENST00000338074 MT1XP80297 61 aa4.84□□□□□ -1.63
EPB41L1-202ENST00000338074 LCE2BO14633 110 aa4.76□□□□□ -1.65
EPB41L1-202ENST00000338074 KRTAP12-4P60329 112 aa4.76□□□□□ -1.65
EPB41L1-202ENST00000338074 HSPG2P98160 4391 aa4.74□□□□□ -1.65
EPB41L1-202ENST00000338074 MT1BP07438 61 aa4.74□□□□□ -1.65
EPB41L1-202ENST00000338074 KRTAP19-8Q3LI54 63 aa4.72□□□□□ -1.65
EPB41L1-202ENST00000338074 KRTAP4-7Q9BYR0 210 aa4.72□□□□□ -1.65
EPB41L1-202ENST00000338074 KRTAP9-8Q9BYQ0 159 aa4.7□□□□□ -1.66
EPB41L1-202ENST00000338074 HYDINQ4G0P3 5121 aa4.67□□□□□ -1.66
EPB41L1-202ENST00000338074 PKHD1P08F94 4074 aa4.66□□□□□ -1.66
EPB41L1-202ENST00000338074 PKD1P98161 4303 aa4.65□□□□□ -1.66
EPB41L1-202ENST00000338074 LRP2P98164 4655 aa4.59□□□□□ -1.67
EPB41L1-202ENST00000338074 KRTAP9-3Q9BYQ3 159 aa4.58□□□□□ -1.68
EPB41L1-202ENST00000338074 KIAA1109Q2LD37 5005 aa4.57□□□□□ -1.68
EPB41L1-202ENST00000338074 LCE2CQ5TA81 110 aa4.56□□□□□ -1.68
EPB41L1-202ENST00000338074 LCE3DQ9BYE3 92 aa4.55□□□□□ -1.68
EPB41L1-202ENST00000338074 PKHD1L1Q86WI1 4243 aa4.54□□□□□ -1.68
EPB41L1-202ENST00000338074 TNXBP22105 4242 aa4.49□□□□□ -1.69
EPB41L1-202ENST00000338074 MT4P47944 62 aa4.49□□□□□ -1.69
EPB41L1-202ENST00000338074 LOC100996750A0A140TA64 210 aa4.49□□□□□ -1.69
EPB41L1-202ENST00000338074 RYR2Q92736 4967 aa4.48□□□□□ -1.69
EPB41L1-202ENST00000338074 SPRR5A0A1B0GTR4 108 aa4.47□□□□□ -1.69
EPB41L1-202ENST00000338074 LCE2DQ5TA82 110 aaPredicted RBP4.44□□□□□ -1.7
EPB41L1-202ENST00000338074 KRTAP4-3Q9BYR4 195 aa4.43□□□□□ -1.7
EPB41L1-202ENST00000338074 LCE3EQ5T5B0 92 aa4.42□□□□□ -1.7
EPB41L1-202ENST00000338074 HERC2O95714 4834 aa4.41□□□□□ -1.7
EPB41L1-202ENST00000338074 KRTAP19-3Q7Z4W3 81 aa4.41□□□□□ -1.7
EPB41L1-202ENST00000338074 KRTAP19-4Q3LI73 84 aa4.39□□□□□ -1.71
EPB41L1-202ENST00000338074 MT1LQ93083 61 aa4.38□□□□□ -1.71
EPB41L1-202ENST00000338074 KMT2CQ8NEZ4 4911 aaKnown RBP4.37□□□□□ -1.71
EPB41L1-202ENST00000338074 MT1EP04732 61 aa4.33□□□□□ -1.72
EPB41L1-202ENST00000338074 PCLOQ9Y6V0 5065 aa4.32□□□□□ -1.72
EPB41L1-202ENST00000338074 HERC1Q15751 4861 aa4.3□□□□□ -1.72
EPB41L1-202ENST00000338074 LCE1BQ5T7P3 118 aa4.29□□□□□ -1.72
EPB41L1-202ENST00000338074 PRM1P04553 51 aa4.28□□□□□ -1.73
EPB41L1-202ENST00000338074 LCE1DQ5T752 114 aa4.24□□□□□ -1.73
EPB41L1-202ENST00000338074 KRTAP19-2Q3LHN2 52 aa4.24□□□□□ -1.73
EPB41L1-202ENST00000338074 MT1MQ8N339 61 aa4.23□□□□□ -1.73
EPB41L1-202ENST00000338074 BIRC6Q9NR09 4857 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms