RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 DYNC1H1Q14204 4646 aaKnown RBP8.83□□□□□ -1
CDC42EP4-201ENST00000335793 KRTAP3-1Q9BYR8 98 aa8.81□□□□□ -1
CDC42EP4-201ENST00000335793 A0A0D9SG42 100 aa8.79□□□□□ -1
CDC42EP4-201ENST00000335793 H1FX-AS1Q4G0G2 97 aa8.77□□□□□ -1.01
CDC42EP4-201ENST00000335793 TPRXLQ17RH7 258 aa8.75□□□□□ -1.01
CDC42EP4-201ENST00000335793 COX6B2Q6YFQ2 88 aa8.74□□□□□ -1.01
CDC42EP4-201ENST00000335793 A0A1B0GVY2 172 aa8.67□□□□□ -1.02
CDC42EP4-201ENST00000335793 APOBP04114 4563 aaKnown RBP8.66□□□□□ -1.02
CDC42EP4-201ENST00000335793 KRTAP10-4P60372 401 aaPredicted RBP8.65□□□□□ -1.02
CDC42EP4-201ENST00000335793 KRTAP15-1Q3LI76 137 aa8.61□□□□□ -1.03
CDC42EP4-201ENST00000335793 Q5VSD8 79 aa8.56□□□□□ -1.04
CDC42EP4-201ENST00000335793 LRP1Q07954 4544 aaKnown RBP8.56□□□□□ -1.04
CDC42EP4-201ENST00000335793 MYCBP2O75592 4640 aa8.56□□□□□ -1.04
CDC42EP4-201ENST00000335793 LUZP6Q538Z0 58 aa8.55□□□□□ -1.04
CDC42EP4-201ENST00000335793 LCE2DQ5TA82 110 aaPredicted RBP8.52□□□□□ -1.05
CDC42EP4-201ENST00000335793 RYR1P21817 5038 aa8.52□□□□□ -1.05
CDC42EP4-201ENST00000335793 RPL37P61927 97 aaKnown RBP8.51□□□□□ -1.05
CDC42EP4-201ENST00000335793 HSPG2P98160 4391 aa8.5□□□□□ -1.05
CDC42EP4-201ENST00000335793 KRTAP17-1Q9BYP8 105 aa8.5□□□□□ -1.05
CDC42EP4-201ENST00000335793 S4R3F8 94 aa8.5□□□□□ -1.05
CDC42EP4-201ENST00000335793 KRTAP3-3Q9BYR6 98 aa8.46□□□□□ -1.06
CDC42EP4-201ENST00000335793 KRTAP3-2Q9BYR7 98 aa8.46□□□□□ -1.06
CDC42EP4-201ENST00000335793 XP32Q5T750 250 aa8.46□□□□□ -1.06
CDC42EP4-201ENST00000335793 KRTAP10-8P60410 259 aa8.45□□□□□ -1.06
CDC42EP4-201ENST00000335793 J3QL48 77 aa8.44□□□□□ -1.06
CDC42EP4-201ENST00000335793 KRTAP4-5Q9BYR2 181 aa8.43□□□□□ -1.06
CDC42EP4-201ENST00000335793 KRTAP13-4Q3LI77 160 aa8.41□□□□□ -1.06
CDC42EP4-201ENST00000335793 BIRC6Q9NR09 4857 aa8.41□□□□□ -1.06
CDC42EP4-201ENST00000335793 PKHD1L1Q86WI1 4243 aa8.4□□□□□ -1.06
CDC42EP4-201ENST00000335793 KRTAP10-6P60371 365 aaPredicted RBP8.38□□□□□ -1.07
CDC42EP4-201ENST00000335793 ABCA13Q86UQ4 5058 aa8.38□□□□□ -1.07
CDC42EP4-201ENST00000335793 FAT3Q8TDW7 4589 aa8.37□□□□□ -1.07
CDC42EP4-201ENST00000335793 HERC2O95714 4834 aa8.35□□□□□ -1.07
CDC42EP4-201ENST00000335793 PCLOQ9Y6V0 5065 aa8.28□□□□□ -1.08
CDC42EP4-201ENST00000335793 KRTAP12-2P59991 146 aa8.22□□□□□ -1.09
CDC42EP4-201ENST00000335793 TNXBP22105 4242 aa8.22□□□□□ -1.09
CDC42EP4-201ENST00000335793 HERC1Q15751 4861 aa8.15□□□□□ -1.1
CDC42EP4-201ENST00000335793 MT1HL1P0DM35 61 aa8.14□□□□□ -1.11
CDC42EP4-201ENST00000335793 LRP2P98164 4655 aa8.13□□□□□ -1.11
CDC42EP4-201ENST00000335793 LPAP08519 4548 aa8.09□□□□□ -1.11
CDC42EP4-201ENST00000335793 M0QZ58 72 aa8.04□□□□□ -1.12
CDC42EP4-201ENST00000335793 KRTAP12-1P59990 96 aa8.04□□□□□ -1.12
CDC42EP4-201ENST00000335793 R4GN34 69 aa8.02□□□□□ -1.13
CDC42EP4-201ENST00000335793 PLAC4Q8WY50 150 aa8.01□□□□□ -1.13
CDC42EP4-201ENST00000335793 SEC61BP60468 96 aaKnown RBP7.88□□□□□ -1.15
CDC42EP4-201ENST00000335793 MUC2Q02817 5179 aa7.76□□□□□ -1.17
CDC42EP4-201ENST00000335793 UBR4Q5T4S7 5183 aa7.76□□□□□ -1.17
CDC42EP4-201ENST00000335793 RNF213Q63HN8 5207 aa7.76□□□□□ -1.17
CDC42EP4-201ENST00000335793 LORP23490 312 aaPredicted RBP7.73□□□□□ -1.17
CDC42EP4-201ENST00000335793 CAMK2N1Q7Z7J9 78 aa7.71□□□□□ -1.17
CDC42EP4-201ENST00000335793 KRTAP4-1Q9BYQ7 146 aa7.65□□□□□ -1.18
CDC42EP4-201ENST00000335793 HMCN2Q8NDA2 5059 aa7.64□□□□□ -1.19
CDC42EP4-201ENST00000335793 MUC17Q685J3 4493 aa7.47□□□□□ -1.21
CDC42EP4-201ENST00000335793 FAT4Q6V0I7 4981 aa7.42□□□□□ -1.22
CDC42EP4-201ENST00000335793 LCE2BO14633 110 aa7.41□□□□□ -1.22
CDC42EP4-201ENST00000335793 PP632Q6XCG6 107 aa7.31□□□□□ -1.24
CDC42EP4-201ENST00000335793 LCE2CQ5TA81 110 aa7.31□□□□□ -1.24
CDC42EP4-201ENST00000335793 M0R2T5 61 aa7.3□□□□□ -1.24
CDC42EP4-201ENST00000335793 KRTAP19-2Q3LHN2 52 aa7.3□□□□□ -1.24
CDC42EP4-201ENST00000335793 TNP1P09430 55 aa7.28□□□□□ -1.24
CDC42EP4-201ENST00000335793 LCE2AQ5TA79 106 aaPredicted RBP7.2□□□□□ -1.26
CDC42EP4-201ENST00000335793 PRO2289Q9P1D8 64 aa7.16□□□□□ -1.26
CDC42EP4-201ENST00000335793 FLGP20930 4061 aaPredicted RBP7.16□□□□□ -1.26
CDC42EP4-201ENST00000335793 KRTAP10-10P60014 251 aa7□□□□□ -1.29
CDC42EP4-201ENST00000335793 SPRR5A0A1B0GTR4 108 aa6.89□□□□□ -1.31
CDC42EP4-201ENST00000335793 KRTAP19-1Q8IUB9 90 aa6.88□□□□□ -1.31
CDC42EP4-201ENST00000335793 FSIP2Q5CZC0 6907 aa6.88□□□□□ -1.31
CDC42EP4-201ENST00000335793 SPRR2GQ9BYE4 73 aa6.88□□□□□ -1.31
CDC42EP4-201ENST00000335793 KRTAP23-1A1A580 65 aa6.84□□□□□ -1.32
CDC42EP4-201ENST00000335793 MT1HP80294 61 aa6.82□□□□□ -1.32
CDC42EP4-201ENST00000335793 LCE3AQ5TA76 89 aa6.82□□□□□ -1.32
CDC42EP4-201ENST00000335793 INE1O15225 51 aa6.78□□□□□ -1.32
CDC42EP4-201ENST00000335793 MT1FP04733 61 aa6.78□□□□□ -1.32
CDC42EP4-201ENST00000335793 MT2AP02795 61 aa6.75□□□□□ -1.33
CDC42EP4-201ENST00000335793 KRTAP9-8Q9BYQ0 159 aa6.63□□□□□ -1.35
CDC42EP4-201ENST00000335793 USH2AO75445 5202 aa6.62□□□□□ -1.35
CDC42EP4-201ENST00000335793 KRTAP10-12P60413 245 aa6.53□□□□□ -1.36
CDC42EP4-201ENST00000335793 KRTAP19-8Q3LI54 63 aa6.51□□□□□ -1.37
CDC42EP4-201ENST00000335793 MT1BP07438 61 aa6.5□□□□□ -1.37
CDC42EP4-201ENST00000335793 KRTAP12-3P60328 96 aa6.5□□□□□ -1.37
CDC42EP4-201ENST00000335793 KRTAP10-5P60370 271 aa6.49□□□□□ -1.37
CDC42EP4-201ENST00000335793 KRTAP8-1Q8IUC2 63 aa6.49□□□□□ -1.37
CDC42EP4-201ENST00000335793 MT1XP80297 61 aa6.49□□□□□ -1.37
CDC42EP4-201ENST00000335793 KRTAP10-7P60409 375 aaPredicted RBP6.41□□□□□ -1.38
CDC42EP4-201ENST00000335793 KRTAP9-3Q9BYQ3 159 aa6.33□□□□□ -1.4
CDC42EP4-201ENST00000335793 KMT2DO14686 5537 aa6.21□□□□□ -1.41
CDC42EP4-201ENST00000335793 KRTAP19-5Q3LI72 72 aa6.18□□□□□ -1.42
CDC42EP4-201ENST00000335793 SSPOA2VEC9 5147 aa6.16□□□□□ -1.42
CDC42EP4-201ENST00000335793 KRTAP4-8A0A0G2JLE6 195 aa6.09□□□□□ -1.43
CDC42EP4-201ENST00000335793 KRTAP4-8Q9BYQ9 185 aa6.09□□□□□ -1.43
CDC42EP4-201ENST00000335793 KRTAP9-2Q9BYQ4 174 aa6.07□□□□□ -1.44
CDC42EP4-201ENST00000335793 LCE3CQ5T5A8 94 aa6.04□□□□□ -1.44
CDC42EP4-201ENST00000335793 FCGBPQ9Y6R7 5405 aaPredicted RBP5.9□□□□□ -1.46
CDC42EP4-201ENST00000335793 KRTAP4-7Q9BYR0 210 aa5.88□□□□□ -1.47
CDC42EP4-201ENST00000335793 SYNE2Q8WXH0 6885 aaKnown RBP5.82□□□□□ -1.48
CDC42EP4-201ENST00000335793 MACF1Q9UPN3 7388 aaKnown RBP5.8□□□□□ -1.48
CDC42EP4-201ENST00000335793 KRTAP9-6A8MVA2 160 aa5.8□□□□□ -1.48
CDC42EP4-201ENST00000335793 CRCT1Q9UGL9 99 aa5.78□□□□□ -1.48
CDC42EP4-201ENST00000335793 KRTAP19-7Q3SYF9 63 aa5.76□□□□□ -1.49
CDC42EP4-201ENST00000335793 MT1LQ93083 61 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms