RNA–Protein interactions for RNA: ENST00000334121.10

SREK1-202, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SREK1, Length 6,781 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-202ENST00000334121 KRTAP3-2Q9BYR7 98 aa4.8□□□□□ -1.64
SREK1-202ENST00000334121 KRTAP8-1Q8IUC2 63 aa4.8□□□□□ -1.64
SREK1-202ENST00000334121 ALMS1Q8TCU4 4167 aa4.71□□□□□ -1.66
SREK1-202ENST00000334121 KRTAP10-4P60372 401 aaPredicted RBP4.7□□□□□ -1.66
SREK1-202ENST00000334121 INE1O15225 51 aa4.63□□□□□ -1.67
SREK1-202ENST00000334121 DNAH9Q9NYC9 4486 aa4.59□□□□□ -1.68
SREK1-202ENST00000334121 DNAH1Q9P2D7 4330 aa4.56□□□□□ -1.68
SREK1-202ENST00000334121 KRTAP4-1Q9BYQ7 146 aa4.56□□□□□ -1.68
SREK1-202ENST00000334121 SPRR2FQ96RM1 72 aa4.54□□□□□ -1.68
SREK1-202ENST00000334121 DNAH10Q8IVF4 4471 aa4.53□□□□□ -1.68
SREK1-202ENST00000334121 DNAH2Q9P225 4427 aa4.52□□□□□ -1.69
SREK1-202ENST00000334121 MT1HP80294 61 aa4.51□□□□□ -1.69
SREK1-202ENST00000334121 FRAS1Q86XX4 4008 aa4.46□□□□□ -1.7
SREK1-202ENST00000334121 VPS13BQ7Z7G8 4022 aa4.45□□□□□ -1.7
SREK1-202ENST00000334121 KMT2AQ03164 3969 aa4.45□□□□□ -1.7
SREK1-202ENST00000334121 ANK2Q01484 3957 aa4.45□□□□□ -1.7
SREK1-202ENST00000334121 DNAH5Q8TE73 4624 aa4.42□□□□□ -1.7
SREK1-202ENST00000334121 KRTAP10-7P60409 375 aaPredicted RBP4.41□□□□□ -1.7
SREK1-202ENST00000334121 LYSTQ99698 3801 aa4.39□□□□□ -1.71
SREK1-202ENST00000334121 MT2AP02795 61 aa4.38□□□□□ -1.71
SREK1-202ENST00000334121 DNAH11Q96DT5 4516 aa4.37□□□□□ -1.71
SREK1-202ENST00000334121 PLECQ15149 4684 aaKnown RBP4.37□□□□□ -1.71
SREK1-202ENST00000334121 KRTAP19-5Q3LI72 72 aa4.37□□□□□ -1.71
SREK1-202ENST00000334121 MT1FP04733 61 aa4.33□□□□□ -1.72
SREK1-202ENST00000334121 FAT2Q9NYQ8 4349 aa4.32□□□□□ -1.72
SREK1-202ENST00000334121 DNAH3Q8TD57 4116 aa4.31□□□□□ -1.72
SREK1-202ENST00000334121 SPRR2EP22531 72 aa4.29□□□□□ -1.72
SREK1-202ENST00000334121 SPRR2BP35325 72 aa4.29□□□□□ -1.72
SREK1-202ENST00000334121 SPRR2AP35326 72 aa4.29□□□□□ -1.72
SREK1-202ENST00000334121 DNAH8Q96JB1 4490 aa4.29□□□□□ -1.72
SREK1-202ENST00000334121 KRTAP23-1A1A580 65 aa4.29□□□□□ -1.72
SREK1-202ENST00000334121 FAT1Q14517 4588 aa4.27□□□□□ -1.73
SREK1-202ENST00000334121 DNAH17Q9UFH2 4485 aa4.26□□□□□ -1.73
SREK1-202ENST00000334121 STARD9Q9P2P6 4700 aa4.26□□□□□ -1.73
SREK1-202ENST00000334121 LRP1BQ9NZR2 4599 aa4.25□□□□□ -1.73
SREK1-202ENST00000334121 PRKDCP78527 4128 aaKnown RBP4.24□□□□□ -1.73
SREK1-202ENST00000334121 CMYA5Q8N3K9 4069 aa4.22□□□□□ -1.73
SREK1-202ENST00000334121 LCE3BQ5TA77 95 aa4.21□□□□□ -1.74
SREK1-202ENST00000334121 SPRR2GQ9BYE4 73 aa4.18□□□□□ -1.74
SREK1-202ENST00000334121 DNAH6Q9C0G6 4158 aa4.18□□□□□ -1.74
SREK1-202ENST00000334121 VPS13DQ5THJ4 4388 aa4.17□□□□□ -1.74
SREK1-202ENST00000334121 LCE3CQ5T5A8 94 aa4.17□□□□□ -1.74
SREK1-202ENST00000334121 SACSQ9NZJ4 4579 aa4.15□□□□□ -1.75
SREK1-202ENST00000334121 DNHD1Q96M86 4753 aa4.14□□□□□ -1.75
SREK1-202ENST00000334121 DYNC2H1Q8NCM8 4307 aaKnown RBP4.14□□□□□ -1.75
SREK1-202ENST00000334121 DNAH7Q8WXX0 4024 aa4.13□□□□□ -1.75
SREK1-202ENST00000334121 SPRR2DP22532 72 aa4.12□□□□□ -1.75
SREK1-202ENST00000334121 MT1GP13640 62 aa4.1□□□□□ -1.75
SREK1-202ENST00000334121 DYNC1H1Q14204 4646 aaKnown RBP4.08□□□□□ -1.76
SREK1-202ENST00000334121 FAT3Q8TDW7 4589 aa4.07□□□□□ -1.76
SREK1-202ENST00000334121 APOBP04114 4563 aaKnown RBP4.07□□□□□ -1.76
SREK1-202ENST00000334121 RYR1P21817 5038 aa4.06□□□□□ -1.76
SREK1-202ENST00000334121 LCE2BO14633 110 aa4.03□□□□□ -1.76
SREK1-202ENST00000334121 KRTAP17-1Q9BYP8 105 aa4.03□□□□□ -1.76
SREK1-202ENST00000334121 KRTAP4-8A0A0G2JLE6 195 aa4.03□□□□□ -1.77
SREK1-202ENST00000334121 KRTAP4-8Q9BYQ9 185 aa4.03□□□□□ -1.77
SREK1-202ENST00000334121 MYCBP2O75592 4640 aa4□□□□□ -1.77
SREK1-202ENST00000334121 LPAP08519 4548 aa3.97□□□□□ -1.77
SREK1-202ENST00000334121 HECTD4Q9Y4D8 3996 aa3.95□□□□□ -1.78
SREK1-202ENST00000334121 LRP1Q07954 4544 aaKnown RBP3.91□□□□□ -1.78
SREK1-202ENST00000334121 KRTAP19-1Q8IUB9 90 aa3.9□□□□□ -1.78
SREK1-202ENST00000334121 KRTAP12-4P60329 112 aa3.9□□□□□ -1.78
SREK1-202ENST00000334121 MT1XP80297 61 aa3.88□□□□□ -1.79
SREK1-202ENST00000334121 MT4P47944 62 aa3.84□□□□□ -1.79
SREK1-202ENST00000334121 PKHD1P08F94 4074 aa3.83□□□□□ -1.8
SREK1-202ENST00000334121 KRTAP4-7Q9BYR0 210 aa3.82□□□□□ -1.8
SREK1-202ENST00000334121 LCE2CQ5TA81 110 aa3.82□□□□□ -1.8
SREK1-202ENST00000334121 HSPG2P98160 4391 aa3.81□□□□□ -1.8
SREK1-202ENST00000334121 LCE2DQ5TA82 110 aaPredicted RBP3.8□□□□□ -1.8
SREK1-202ENST00000334121 MT1BP07438 61 aa3.79□□□□□ -1.8
SREK1-202ENST00000334121 KRTAP9-8Q9BYQ0 159 aa3.79□□□□□ -1.8
SREK1-202ENST00000334121 PKD1P98161 4303 aa3.78□□□□□ -1.8
SREK1-202ENST00000334121 KRTAP19-8Q3LI54 63 aa3.77□□□□□ -1.81
SREK1-202ENST00000334121 RYR3Q15413 4870 aa3.77□□□□□ -1.81
SREK1-202ENST00000334121 SPRR5A0A1B0GTR4 108 aa3.75□□□□□ -1.81
SREK1-202ENST00000334121 LCE3DQ9BYE3 92 aa3.74□□□□□ -1.81
SREK1-202ENST00000334121 PKHD1L1Q86WI1 4243 aa3.69□□□□□ -1.82
SREK1-202ENST00000334121 KRTAP9-3Q9BYQ3 159 aa3.69□□□□□ -1.82
SREK1-202ENST00000334121 LRP2P98164 4655 aa3.66□□□□□ -1.82
SREK1-202ENST00000334121 LCE1BQ5T7P3 118 aa3.65□□□□□ -1.82
SREK1-202ENST00000334121 LOC100996750A0A140TA64 210 aa3.65□□□□□ -1.83
SREK1-202ENST00000334121 KRTAP9-2Q9BYQ4 174 aa3.61□□□□□ -1.83
SREK1-202ENST00000334121 LCE3EQ5T5B0 92 aa3.61□□□□□ -1.83
SREK1-202ENST00000334121 KRTAP4-3Q9BYR4 195 aa3.61□□□□□ -1.83
SREK1-202ENST00000334121 KRTAP19-3Q7Z4W3 81 aa3.6□□□□□ -1.83
SREK1-202ENST00000334121 LCE1DQ5T752 114 aa3.6□□□□□ -1.83
SREK1-202ENST00000334121 TNXBP22105 4242 aa3.56□□□□□ -1.84
SREK1-202ENST00000334121 HYDINQ4G0P3 5121 aa3.56□□□□□ -1.84
SREK1-202ENST00000334121 FLGP20930 4061 aaPredicted RBP3.54□□□□□ -1.84
SREK1-202ENST00000334121 MT1LQ93083 61 aa3.52□□□□□ -1.85
SREK1-202ENST00000334121 KRTAP19-4Q3LI73 84 aa3.52□□□□□ -1.85
SREK1-202ENST00000334121 SYNE2Q8WXH0 6885 aaKnown RBP3.49□□□□□ -1.85
SREK1-202ENST00000334121 MT1EP04732 61 aa3.49□□□□□ -1.85
SREK1-202ENST00000334121 PRM1P04553 51 aa3.48□□□□□ -1.85
SREK1-202ENST00000334121 KIAA1109Q2LD37 5005 aa3.47□□□□□ -1.85
SREK1-202ENST00000334121 FSIP2Q5CZC0 6907 aa3.45□□□□□ -1.86
SREK1-202ENST00000334121 KRTAP4-9Q9BYQ8 210 aa3.44□□□□□ -1.86
SREK1-202ENST00000334121 MT1MQ8N339 61 aa3.43□□□□□ -1.86
SREK1-202ENST00000334121 HERC2O95714 4834 aa3.42□□□□□ -1.86
SREK1-202ENST00000334121 LCE5AQ5TCM9 118 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms