RNA–Protein interactions for RNA: ENST00000333007.5

TNFAIP2-201, Transcript of TNF alpha induced protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP2, Length 4,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-201ENST00000333007 FRAS1Q86XX4 4008 aa9.08□□□□□ -0.96
TNFAIP2-201ENST00000333007 DNAH2Q9P225 4427 aa9.07□□□□□ -0.96
TNFAIP2-201ENST00000333007 KRTAP13-4Q3LI77 160 aa9.07□□□□□ -0.96
TNFAIP2-201ENST00000333007 KRTAP10-6P60371 365 aaPredicted RBP9.06□□□□□ -0.96
TNFAIP2-201ENST00000333007 TPRXLQ17RH7 258 aa9.05□□□□□ -0.96
TNFAIP2-201ENST00000333007 KRTAP12-2P59991 146 aa9.01□□□□□ -0.97
TNFAIP2-201ENST00000333007 FAT1Q14517 4588 aa8.99□□□□□ -0.97
TNFAIP2-201ENST00000333007 KRTAP3-3Q9BYR6 98 aa8.94□□□□□ -0.98
TNFAIP2-201ENST00000333007 PLAC4Q8WY50 150 aa8.93□□□□□ -0.98
TNFAIP2-201ENST00000333007 DNAH6Q9C0G6 4158 aa8.9□□□□□ -0.98
TNFAIP2-201ENST00000333007 HECTD4Q9Y4D8 3996 aa8.9□□□□□ -0.99
TNFAIP2-201ENST00000333007 KRTAP12-1P59990 96 aa8.88□□□□□ -0.99
TNFAIP2-201ENST00000333007 KRTAP3-2Q9BYR7 98 aa8.87□□□□□ -0.99
TNFAIP2-201ENST00000333007 DYNC1H1Q14204 4646 aaKnown RBP8.85□□□□□ -0.99
TNFAIP2-201ENST00000333007 DYNC2H1Q8NCM8 4307 aaKnown RBP8.85□□□□□ -0.99
TNFAIP2-201ENST00000333007 VPS13BQ7Z7G8 4022 aa8.84□□□□□ -0.99
TNFAIP2-201ENST00000333007 MT1HL1P0DM35 61 aa8.81□□□□□ -1
TNFAIP2-201ENST00000333007 ALMS1Q8TCU4 4167 aa8.8□□□□□ -1
TNFAIP2-201ENST00000333007 TNP1P09430 55 aa8.71□□□□□ -1.01
TNFAIP2-201ENST00000333007 KRTAP4-5Q9BYR2 181 aa8.64□□□□□ -1.03
TNFAIP2-201ENST00000333007 HYDINQ4G0P3 5121 aa8.64□□□□□ -1.03
TNFAIP2-201ENST00000333007 MYCBP2O75592 4640 aa8.64□□□□□ -1.03
TNFAIP2-201ENST00000333007 SACSQ9NZJ4 4579 aa8.63□□□□□ -1.03
TNFAIP2-201ENST00000333007 FAT2Q9NYQ8 4349 aa8.53□□□□□ -1.04
TNFAIP2-201ENST00000333007 PP632Q6XCG6 107 aa8.52□□□□□ -1.04
TNFAIP2-201ENST00000333007 PKHD1P08F94 4074 aa8.51□□□□□ -1.05
TNFAIP2-201ENST00000333007 LRP1Q07954 4544 aaKnown RBP8.5□□□□□ -1.05
TNFAIP2-201ENST00000333007 APOBP04114 4563 aaKnown RBP8.45□□□□□ -1.06
TNFAIP2-201ENST00000333007 KIAA1109Q2LD37 5005 aa8.42□□□□□ -1.06
TNFAIP2-201ENST00000333007 KRTAP15-1Q3LI76 137 aa8.42□□□□□ -1.06
TNFAIP2-201ENST00000333007 RYR1P21817 5038 aa8.4□□□□□ -1.06
TNFAIP2-201ENST00000333007 KRTAP10-10P60014 251 aa8.35□□□□□ -1.07
TNFAIP2-201ENST00000333007 LORP23490 312 aaPredicted RBP8.34□□□□□ -1.07
TNFAIP2-201ENST00000333007 FAT3Q8TDW7 4589 aa8.33□□□□□ -1.08
TNFAIP2-201ENST00000333007 PKD1P98161 4303 aa8.29□□□□□ -1.08
TNFAIP2-201ENST00000333007 KRTAP17-1Q9BYP8 105 aa8.26□□□□□ -1.09
TNFAIP2-201ENST00000333007 RYR3Q15413 4870 aa8.24□□□□□ -1.09
TNFAIP2-201ENST00000333007 RYR2Q92736 4967 aa8.17□□□□□ -1.1
TNFAIP2-201ENST00000333007 KRTAP4-1Q9BYQ7 146 aa8.14□□□□□ -1.11
TNFAIP2-201ENST00000333007 LRP2P98164 4655 aa8.11□□□□□ -1.11
TNFAIP2-201ENST00000333007 KMT2CQ8NEZ4 4911 aaKnown RBP8.09□□□□□ -1.11
TNFAIP2-201ENST00000333007 HSPG2P98160 4391 aa7.95□□□□□ -1.14
TNFAIP2-201ENST00000333007 PKHD1L1Q86WI1 4243 aa7.83□□□□□ -1.16
TNFAIP2-201ENST00000333007 LPAP08519 4548 aa7.8□□□□□ -1.16
TNFAIP2-201ENST00000333007 HERC2O95714 4834 aa7.77□□□□□ -1.16
TNFAIP2-201ENST00000333007 PRO2289Q9P1D8 64 aa7.77□□□□□ -1.17
TNFAIP2-201ENST00000333007 TNXBP22105 4242 aa7.76□□□□□ -1.17
TNFAIP2-201ENST00000333007 LCE3AQ5TA76 89 aa7.63□□□□□ -1.19
TNFAIP2-201ENST00000333007 EPPK1P58107 5090 aaKnown RBP7.57□□□□□ -1.2
TNFAIP2-201ENST00000333007 KRTAP23-1A1A580 65 aa7.56□□□□□ -1.2
TNFAIP2-201ENST00000333007 KRTAP10-12P60413 245 aa7.5□□□□□ -1.21
TNFAIP2-201ENST00000333007 PCLOQ9Y6V0 5065 aa7.48□□□□□ -1.21
TNFAIP2-201ENST00000333007 ABCA13Q86UQ4 5058 aa7.46□□□□□ -1.22
TNFAIP2-201ENST00000333007 MT1HP80294 61 aa7.45□□□□□ -1.22
TNFAIP2-201ENST00000333007 SPRR2GQ9BYE4 73 aa7.45□□□□□ -1.22
TNFAIP2-201ENST00000333007 KRTAP12-3P60328 96 aa7.42□□□□□ -1.22
TNFAIP2-201ENST00000333007 MT2AP02795 61 aa7.41□□□□□ -1.22
TNFAIP2-201ENST00000333007 BIRC6Q9NR09 4857 aa7.39□□□□□ -1.23
TNFAIP2-201ENST00000333007 MT1FP04733 61 aa7.38□□□□□ -1.23
TNFAIP2-201ENST00000333007 KRTAP19-2Q3LHN2 52 aa7.34□□□□□ -1.23
TNFAIP2-201ENST00000333007 KRTAP19-1Q8IUB9 90 aa7.34□□□□□ -1.24
TNFAIP2-201ENST00000333007 CRCT1Q9UGL9 99 aa7.27□□□□□ -1.25
TNFAIP2-201ENST00000333007 MUC2Q02817 5179 aa7.26□□□□□ -1.25
TNFAIP2-201ENST00000333007 INE1O15225 51 aa7.23□□□□□ -1.25
TNFAIP2-201ENST00000333007 LCE2CQ5TA81 110 aa7.2□□□□□ -1.26
TNFAIP2-201ENST00000333007 MUC17Q685J3 4493 aa7.2□□□□□ -1.26
TNFAIP2-201ENST00000333007 FSIP2Q5CZC0 6907 aa7.17□□□□□ -1.26
TNFAIP2-201ENST00000333007 HERC1Q15751 4861 aa7.17□□□□□ -1.26
TNFAIP2-201ENST00000333007 FLGP20930 4061 aaPredicted RBP7.1□□□□□ -1.27
TNFAIP2-201ENST00000333007 KRTAP8-1Q8IUC2 63 aa7.09□□□□□ -1.28
TNFAIP2-201ENST00000333007 FAT4Q6V0I7 4981 aa7.03□□□□□ -1.28
TNFAIP2-201ENST00000333007 KRTAP9-8Q9BYQ0 159 aa7.02□□□□□ -1.29
TNFAIP2-201ENST00000333007 KRTAP19-8Q3LI54 63 aa7.01□□□□□ -1.29
TNFAIP2-201ENST00000333007 RNF213Q63HN8 5207 aa6.98□□□□□ -1.29
TNFAIP2-201ENST00000333007 KRTAP10-7P60409 375 aaPredicted RBP6.97□□□□□ -1.29
TNFAIP2-201ENST00000333007 MT1XP80297 61 aa6.97□□□□□ -1.29
TNFAIP2-201ENST00000333007 MT1BP07438 61 aa6.96□□□□□ -1.3
TNFAIP2-201ENST00000333007 SPRR5A0A1B0GTR4 108 aa6.95□□□□□ -1.3
TNFAIP2-201ENST00000333007 KRTAP10-5P60370 271 aa6.94□□□□□ -1.3
TNFAIP2-201ENST00000333007 KRTAP19-5Q3LI72 72 aa6.88□□□□□ -1.31
TNFAIP2-201ENST00000333007 UBR4Q5T4S7 5183 aa6.86□□□□□ -1.31
TNFAIP2-201ENST00000333007 HMCN2Q8NDA2 5059 aa6.78□□□□□ -1.32
TNFAIP2-201ENST00000333007 KRTAP9-3Q9BYQ3 159 aa6.75□□□□□ -1.33
TNFAIP2-201ENST00000333007 LCE3CQ5T5A8 94 aa6.73□□□□□ -1.33
TNFAIP2-201ENST00000333007 OBSCNQ5VST9 7968 aa6.67□□□□□ -1.34
TNFAIP2-201ENST00000333007 KRTAP4-8A0A0G2JLE6 195 aa6.64□□□□□ -1.35
TNFAIP2-201ENST00000333007 KRTAP4-8Q9BYQ9 185 aa6.64□□□□□ -1.35
TNFAIP2-201ENST00000333007 SYNE1Q8NF91 8797 aaKnown RBP6.63□□□□□ -1.35
TNFAIP2-201ENST00000333007 LCE2BO14633 110 aa6.53□□□□□ -1.36
TNFAIP2-201ENST00000333007 KRTAP4-7Q9BYR0 210 aa6.38□□□□□ -1.39
TNFAIP2-201ENST00000333007 SPRR2FQ96RM1 72 aa6.36□□□□□ -1.39
TNFAIP2-201ENST00000333007 USH2AO75445 5202 aa6.21□□□□□ -1.41
TNFAIP2-201ENST00000333007 KRTAP19-4Q3LI73 84 aa6.15□□□□□ -1.43
TNFAIP2-201ENST00000333007 MT1GP13640 62 aa6.14□□□□□ -1.43
TNFAIP2-201ENST00000333007 MT1LQ93083 61 aa6.14□□□□□ -1.43
TNFAIP2-201ENST00000333007 LCE2AQ5TA79 106 aaPredicted RBP6.13□□□□□ -1.43
TNFAIP2-201ENST00000333007 KMT2DO14686 5537 aa6.12□□□□□ -1.43
TNFAIP2-201ENST00000333007 DSTQ03001 7570 aaKnown RBP6.1□□□□□ -1.43
TNFAIP2-201ENST00000333007 MT1EP04732 61 aa6.1□□□□□ -1.43
TNFAIP2-201ENST00000333007 KRTAP12-4P60329 112 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms