RNA–Protein interactions for RNA: ENST00000332904.7

CDHR1-201, Transcript of cadherin related family member 1, humanhuman

TSL 1 (best) BASIC

Gene CDHR1, Length 2,694 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR1-201ENST00000332904 KRTAP3-3Q9BYR6 98 aa9.33□□□□□ -0.92
CDHR1-201ENST00000332904 KRTAP15-1Q3LI76 137 aa9.32□□□□□ -0.92
CDHR1-201ENST00000332904 PKHD1L1Q86WI1 4243 aa9.32□□□□□ -0.92
CDHR1-201ENST00000332904 KRTAP3-2Q9BYR7 98 aa9.31□□□□□ -0.92
CDHR1-201ENST00000332904 DNHD1Q96M86 4753 aa9.27□□□□□ -0.93
CDHR1-201ENST00000332904 DYNC1H1Q14204 4646 aaKnown RBP9.25□□□□□ -0.93
CDHR1-201ENST00000332904 HSPG2P98160 4391 aa9.23□□□□□ -0.93
CDHR1-201ENST00000332904 KRTAP12-2P59991 146 aa9.22□□□□□ -0.93
CDHR1-201ENST00000332904 S4R3F8 94 aa9.21□□□□□ -0.93
CDHR1-201ENST00000332904 MYCBP2O75592 4640 aa9.17□□□□□ -0.94
CDHR1-201ENST00000332904 APOBP04114 4563 aaKnown RBP9.17□□□□□ -0.94
CDHR1-201ENST00000332904 KRTAP10-8P60410 259 aa9.15□□□□□ -0.95
CDHR1-201ENST00000332904 FAT3Q8TDW7 4589 aa9.06□□□□□ -0.96
CDHR1-201ENST00000332904 KRTAP12-1P59990 96 aa9.05□□□□□ -0.96
CDHR1-201ENST00000332904 LRP1Q07954 4544 aaKnown RBP9.05□□□□□ -0.96
CDHR1-201ENST00000332904 KRTAP10-4P60372 401 aaPredicted RBP8.99□□□□□ -0.97
CDHR1-201ENST00000332904 XP32Q5T750 250 aa8.97□□□□□ -0.97
CDHR1-201ENST00000332904 LPAP08519 4548 aa8.92□□□□□ -0.98
CDHR1-201ENST00000332904 TNXBP22105 4242 aa8.9□□□□□ -0.98
CDHR1-201ENST00000332904 KMT2CQ8NEZ4 4911 aaKnown RBP8.74□□□□□ -1.01
CDHR1-201ENST00000332904 A0A0A0MQY5 61 aa8.73□□□□□ -1.01
CDHR1-201ENST00000332904 M0QZ58 72 aa8.71□□□□□ -1.01
CDHR1-201ENST00000332904 LRP2P98164 4655 aa8.68□□□□□ -1.02
CDHR1-201ENST00000332904 A0A1B0GVY2 172 aa8.66□□□□□ -1.02
CDHR1-201ENST00000332904 PLAC4Q8WY50 150 aa8.66□□□□□ -1.02
CDHR1-201ENST00000332904 LUZP6Q538Z0 58 aa8.6□□□□□ -1.03
CDHR1-201ENST00000332904 R4GN34 69 aa8.53□□□□□ -1.04
CDHR1-201ENST00000332904 LORP23490 312 aaPredicted RBP8.46□□□□□ -1.06
CDHR1-201ENST00000332904 RYR2Q92736 4967 aa8.46□□□□□ -1.06
CDHR1-201ENST00000332904 Q5VSD8 79 aa8.42□□□□□ -1.06
CDHR1-201ENST00000332904 RYR1P21817 5038 aa8.36□□□□□ -1.07
CDHR1-201ENST00000332904 KRTAP17-1Q9BYP8 105 aa8.34□□□□□ -1.07
CDHR1-201ENST00000332904 MT1HL1P0DM35 61 aa8.27□□□□□ -1.08
CDHR1-201ENST00000332904 KIAA1109Q2LD37 5005 aa8.23□□□□□ -1.09
CDHR1-201ENST00000332904 ABCA13Q86UQ4 5058 aa8.23□□□□□ -1.09
CDHR1-201ENST00000332904 CAMK2N1Q7Z7J9 78 aa8.19□□□□□ -1.1
CDHR1-201ENST00000332904 RYR3Q15413 4870 aa8.17□□□□□ -1.1
CDHR1-201ENST00000332904 PP632Q6XCG6 107 aa8.15□□□□□ -1.1
CDHR1-201ENST00000332904 MUC17Q685J3 4493 aa8.13□□□□□ -1.11
CDHR1-201ENST00000332904 KRTAP21-3Q3LHN1 58 aa8.01□□□□□ -1.13
CDHR1-201ENST00000332904 KRTAP4-1Q9BYQ7 146 aa7.98□□□□□ -1.13
CDHR1-201ENST00000332904 MUC2Q02817 5179 aa7.94□□□□□ -1.14
CDHR1-201ENST00000332904 SPRR5A0A1B0GTR4 108 aa7.87□□□□□ -1.15
CDHR1-201ENST00000332904 TNP1P09430 55 aa7.86□□□□□ -1.15
CDHR1-201ENST00000332904 SEC61BP60468 96 aaKnown RBP7.83□□□□□ -1.16
CDHR1-201ENST00000332904 KRTAP19-2Q3LHN2 52 aa7.79□□□□□ -1.16
CDHR1-201ENST00000332904 EPPK1P58107 5090 aaKnown RBP7.77□□□□□ -1.17
CDHR1-201ENST00000332904 KRTAP4-5Q9BYR2 181 aa7.71□□□□□ -1.17
CDHR1-201ENST00000332904 FLGP20930 4061 aaPredicted RBP7.7□□□□□ -1.18
CDHR1-201ENST00000332904 PCLOQ9Y6V0 5065 aa7.67□□□□□ -1.18
CDHR1-201ENST00000332904 KRTAP23-1A1A580 65 aa7.65□□□□□ -1.19
CDHR1-201ENST00000332904 PRO2289Q9P1D8 64 aa7.52□□□□□ -1.21
CDHR1-201ENST00000332904 FAT4Q6V0I7 4981 aa7.51□□□□□ -1.21
CDHR1-201ENST00000332904 HERC1Q15751 4861 aa7.5□□□□□ -1.21
CDHR1-201ENST00000332904 LCE3AQ5TA76 89 aa7.49□□□□□ -1.21
CDHR1-201ENST00000332904 HERC2O95714 4834 aa7.39□□□□□ -1.23
CDHR1-201ENST00000332904 J3QL48 77 aa7.37□□□□□ -1.23
CDHR1-201ENST00000332904 KRTAP19-1Q8IUB9 90 aa7.31□□□□□ -1.24
CDHR1-201ENST00000332904 BIRC6Q9NR09 4857 aa7.29□□□□□ -1.24
CDHR1-201ENST00000332904 INE1O15225 51 aa7.28□□□□□ -1.24
CDHR1-201ENST00000332904 SPRR2GQ9BYE4 73 aa7.27□□□□□ -1.25
CDHR1-201ENST00000332904 HMCN2Q8NDA2 5059 aa7.19□□□□□ -1.26
CDHR1-201ENST00000332904 KRTAP8-1Q8IUC2 63 aa7.16□□□□□ -1.26
CDHR1-201ENST00000332904 UBR4Q5T4S7 5183 aa7.15□□□□□ -1.27
CDHR1-201ENST00000332904 LCE2CQ5TA81 110 aa7.12□□□□□ -1.27
CDHR1-201ENST00000332904 M0R2T5 61 aa7.07□□□□□ -1.28
CDHR1-201ENST00000332904 KRTAP12-3P60328 96 aa7.05□□□□□ -1.28
CDHR1-201ENST00000332904 RNF213Q63HN8 5207 aa7.03□□□□□ -1.28
CDHR1-201ENST00000332904 KRTAP10-12P60413 245 aa7.01□□□□□ -1.29
CDHR1-201ENST00000332904 MT1FP04733 61 aa7□□□□□ -1.29
CDHR1-201ENST00000332904 KRTAP10-10P60014 251 aa7□□□□□ -1.29
CDHR1-201ENST00000332904 KRTAP10-5P60370 271 aa6.95□□□□□ -1.3
CDHR1-201ENST00000332904 MT2AP02795 61 aa6.93□□□□□ -1.3
CDHR1-201ENST00000332904 MT1XP80297 61 aa6.93□□□□□ -1.3
CDHR1-201ENST00000332904 MT1HP80294 61 aa6.88□□□□□ -1.31
CDHR1-201ENST00000332904 KRTAP10-7P60409 375 aaPredicted RBP6.87□□□□□ -1.31
CDHR1-201ENST00000332904 MT1BP07438 61 aa6.84□□□□□ -1.31
CDHR1-201ENST00000332904 KRTAP19-8Q3LI54 63 aa6.82□□□□□ -1.32
CDHR1-201ENST00000332904 KRTAP9-8Q9BYQ0 159 aa6.81□□□□□ -1.32
CDHR1-201ENST00000332904 KMT2DO14686 5537 aa6.74□□□□□ -1.33
CDHR1-201ENST00000332904 LCE3CQ5T5A8 94 aa6.65□□□□□ -1.35
CDHR1-201ENST00000332904 KRTAP19-5Q3LI72 72 aa6.63□□□□□ -1.35
CDHR1-201ENST00000332904 KRTAP9-6A8MVA2 160 aa6.6□□□□□ -1.35
CDHR1-201ENST00000332904 USH2AO75445 5202 aa6.55□□□□□ -1.36
CDHR1-201ENST00000332904 KRTAP9-3Q9BYQ3 159 aa6.47□□□□□ -1.37
CDHR1-201ENST00000332904 KRTAP4-7Q9BYR0 210 aa6.42□□□□□ -1.38
CDHR1-201ENST00000332904 KRTAP4-8A0A0G2JLE6 195 aa6.4□□□□□ -1.38
CDHR1-201ENST00000332904 KRTAP4-8Q9BYQ9 185 aa6.4□□□□□ -1.38
CDHR1-201ENST00000332904 KRTAP2-3P0C7H8 128 aa6.38□□□□□ -1.39
CDHR1-201ENST00000332904 KRTAP2-4Q9BYR9 128 aa6.38□□□□□ -1.39
CDHR1-201ENST00000332904 KRTAP2-1Q9BYU5 128 aa6.38□□□□□ -1.39
CDHR1-201ENST00000332904 LCE2BO14633 110 aa6.22□□□□□ -1.41
CDHR1-201ENST00000332904 KRTAP19-7Q3SYF9 63 aa6.17□□□□□ -1.42
CDHR1-201ENST00000332904 MT1LQ93083 61 aa6.01□□□□□ -1.45
CDHR1-201ENST00000332904 LOC100996750A0A140TA64 210 aa5.95□□□□□ -1.46
CDHR1-201ENST00000332904 MT1EP04732 61 aa5.92□□□□□ -1.46
CDHR1-201ENST00000332904 KRTAP12-4P60329 112 aa5.89□□□□□ -1.47
CDHR1-201ENST00000332904 KRTAP4-3Q9BYR4 195 aa5.86□□□□□ -1.47
CDHR1-201ENST00000332904 MT1GP13640 62 aa5.79□□□□□ -1.48
CDHR1-201ENST00000332904 CRCT1Q9UGL9 99 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms