RNA–Protein interactions for RNA: ENST00000331728.8

LIMK2-201, Transcript of LIM domain kinase 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIMK2, Length 3,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-201ENST00000331728 KRTAP10-6P60371 365 aaPredicted RBP4.47□□□□□ -1.69
LIMK2-201ENST00000331728 XP32Q5T750 250 aa4.47□□□□□ -1.69
LIMK2-201ENST00000331728 P0C880 135 aa4.47□□□□□ -1.69
LIMK2-201ENST00000331728 KRTAP13-4Q3LI77 160 aa4.45□□□□□ -1.7
LIMK2-201ENST00000331728 TPRXLQ17RH7 258 aa4.43□□□□□ -1.7
LIMK2-201ENST00000331728 KRTAP3-3Q9BYR6 98 aa4.43□□□□□ -1.7
LIMK2-201ENST00000331728 PKHD1L1Q86WI1 4243 aa4.43□□□□□ -1.7
LIMK2-201ENST00000331728 KRTAP10-8P60410 259 aa4.42□□□□□ -1.7
LIMK2-201ENST00000331728 KRTAP3-2Q9BYR7 98 aa4.42□□□□□ -1.7
LIMK2-201ENST00000331728 C10orf95Q9H7T3 257 aa4.41□□□□□ -1.7
LIMK2-201ENST00000331728 PKHD1P08F94 4074 aa4.41□□□□□ -1.7
LIMK2-201ENST00000331728 APOBP04114 4563 aaKnown RBP4.39□□□□□ -1.71
LIMK2-201ENST00000331728 M0QZ58 72 aa4.35□□□□□ -1.71
LIMK2-201ENST00000331728 KRTAP12-2P59991 146 aa4.34□□□□□ -1.71
LIMK2-201ENST00000331728 R4GN34 69 aa4.33□□□□□ -1.72
LIMK2-201ENST00000331728 NDUFAF8A1L188 74 aa4.32□□□□□ -1.72
LIMK2-201ENST00000331728 KRTAP15-1Q3LI76 137 aa4.31□□□□□ -1.72
LIMK2-201ENST00000331728 FAT3Q8TDW7 4589 aa4.31□□□□□ -1.72
LIMK2-201ENST00000331728 KRTAP12-1P59990 96 aa4.3□□□□□ -1.72
LIMK2-201ENST00000331728 MYCBP2O75592 4640 aa4.27□□□□□ -1.73
LIMK2-201ENST00000331728 LRP1Q07954 4544 aaKnown RBP4.26□□□□□ -1.73
LIMK2-201ENST00000331728 HSPG2P98160 4391 aa4.25□□□□□ -1.73
LIMK2-201ENST00000331728 SEC61BP60468 96 aaKnown RBP4.24□□□□□ -1.73
LIMK2-201ENST00000331728 MT1HL1P0DM35 61 aa4.23□□□□□ -1.73
LIMK2-201ENST00000331728 J3QL48 77 aa4.2□□□□□ -1.74
LIMK2-201ENST00000331728 TNXBP22105 4242 aa4.2□□□□□ -1.74
LIMK2-201ENST00000331728 CAMK2N1Q7Z7J9 78 aa4.2□□□□□ -1.74
LIMK2-201ENST00000331728 RYR2Q92736 4967 aa4.17□□□□□ -1.74
LIMK2-201ENST00000331728 KMT2CQ8NEZ4 4911 aaKnown RBP4.15□□□□□ -1.75
LIMK2-201ENST00000331728 LUZP6Q538Z0 58 aa4.11□□□□□ -1.75
LIMK2-201ENST00000331728 RYR1P21817 5038 aa4.09□□□□□ -1.75
LIMK2-201ENST00000331728 PLAC4Q8WY50 150 aa4.09□□□□□ -1.75
LIMK2-201ENST00000331728 A0A0A0MQY5 61 aa4.09□□□□□ -1.76
LIMK2-201ENST00000331728 KIAA1109Q2LD37 5005 aa4.08□□□□□ -1.76
LIMK2-201ENST00000331728 KRTAP17-1Q9BYP8 105 aa4.08□□□□□ -1.76
LIMK2-201ENST00000331728 LRP2P98164 4655 aa4.05□□□□□ -1.76
LIMK2-201ENST00000331728 RYR3Q15413 4870 aa4.05□□□□□ -1.76
LIMK2-201ENST00000331728 PP632Q6XCG6 107 aa4.03□□□□□ -1.76
LIMK2-201ENST00000331728 LPAP08519 4548 aa4.02□□□□□ -1.77
LIMK2-201ENST00000331728 LORP23490 312 aaPredicted RBP4.02□□□□□ -1.77
LIMK2-201ENST00000331728 KRTAP4-5Q9BYR2 181 aa3.99□□□□□ -1.77
LIMK2-201ENST00000331728 TNP1P09430 55 aa3.96□□□□□ -1.78
LIMK2-201ENST00000331728 KRTAP4-1Q9BYQ7 146 aa3.94□□□□□ -1.78
LIMK2-201ENST00000331728 M0R2T5 61 aa3.9□□□□□ -1.79
LIMK2-201ENST00000331728 EPPK1P58107 5090 aaKnown RBP3.89□□□□□ -1.79
LIMK2-201ENST00000331728 MUC17Q685J3 4493 aa3.84□□□□□ -1.8
LIMK2-201ENST00000331728 ABCA13Q86UQ4 5058 aa3.81□□□□□ -1.8
LIMK2-201ENST00000331728 HERC2O95714 4834 aa3.77□□□□□ -1.81
LIMK2-201ENST00000331728 KRTAP23-1A1A580 65 aa3.77□□□□□ -1.81
LIMK2-201ENST00000331728 KRTAP19-2Q3LHN2 52 aa3.77□□□□□ -1.81
LIMK2-201ENST00000331728 SPRR5A0A1B0GTR4 108 aa3.72□□□□□ -1.81
LIMK2-201ENST00000331728 KRTAP10-10P60014 251 aa3.71□□□□□ -1.82
LIMK2-201ENST00000331728 BIRC6Q9NR09 4857 aa3.68□□□□□ -1.82
LIMK2-201ENST00000331728 FLGP20930 4061 aaPredicted RBP3.68□□□□□ -1.82
LIMK2-201ENST00000331728 HERC1Q15751 4861 aa3.66□□□□□ -1.82
LIMK2-201ENST00000331728 LCE3AQ5TA76 89 aa3.63□□□□□ -1.83
LIMK2-201ENST00000331728 SPRR2GQ9BYE4 73 aa3.62□□□□□ -1.83
LIMK2-201ENST00000331728 MUC2Q02817 5179 aa3.58□□□□□ -1.84
LIMK2-201ENST00000331728 KRTAP19-1Q8IUB9 90 aa3.58□□□□□ -1.84
LIMK2-201ENST00000331728 LCE2CQ5TA81 110 aa3.55□□□□□ -1.84
LIMK2-201ENST00000331728 MT1HP80294 61 aa3.54□□□□□ -1.84
LIMK2-201ENST00000331728 MT2AP02795 61 aa3.53□□□□□ -1.84
LIMK2-201ENST00000331728 MT1FP04733 61 aa3.52□□□□□ -1.85
LIMK2-201ENST00000331728 PRO2289Q9P1D8 64 aa3.51□□□□□ -1.85
LIMK2-201ENST00000331728 PCLOQ9Y6V0 5065 aa3.51□□□□□ -1.85
LIMK2-201ENST00000331728 KRTAP10-12P60413 245 aa3.5□□□□□ -1.85
LIMK2-201ENST00000331728 KRTAP12-3P60328 96 aa3.48□□□□□ -1.85
LIMK2-201ENST00000331728 INE1O15225 51 aa3.47□□□□□ -1.85
LIMK2-201ENST00000331728 FAT4Q6V0I7 4981 aa3.47□□□□□ -1.85
LIMK2-201ENST00000331728 KRTAP8-1Q8IUC2 63 aa3.47□□□□□ -1.85
LIMK2-201ENST00000331728 HMCN2Q8NDA2 5059 aa3.45□□□□□ -1.86
LIMK2-201ENST00000331728 KRTAP19-8Q3LI54 63 aa3.43□□□□□ -1.86
LIMK2-201ENST00000331728 KRTAP9-8Q9BYQ0 159 aa3.41□□□□□ -1.86
LIMK2-201ENST00000331728 MT1XP80297 61 aa3.39□□□□□ -1.87
LIMK2-201ENST00000331728 MT1BP07438 61 aa3.39□□□□□ -1.87
LIMK2-201ENST00000331728 RNF213Q63HN8 5207 aa3.39□□□□□ -1.87
LIMK2-201ENST00000331728 KRTAP10-5P60370 271 aa3.39□□□□□ -1.87
LIMK2-201ENST00000331728 UBR4Q5T4S7 5183 aa3.38□□□□□ -1.87
LIMK2-201ENST00000331728 KRTAP10-7P60409 375 aaPredicted RBP3.34□□□□□ -1.87
LIMK2-201ENST00000331728 KRTAP9-3Q9BYQ3 159 aa3.27□□□□□ -1.89
LIMK2-201ENST00000331728 KRTAP19-5Q3LI72 72 aa3.26□□□□□ -1.89
LIMK2-201ENST00000331728 LCE3CQ5T5A8 94 aa3.22□□□□□ -1.89
LIMK2-201ENST00000331728 LCE2BO14633 110 aa3.14□□□□□ -1.91
LIMK2-201ENST00000331728 KRTAP4-8A0A0G2JLE6 195 aa3.13□□□□□ -1.91
LIMK2-201ENST00000331728 KRTAP4-8Q9BYQ9 185 aa3.13□□□□□ -1.91
LIMK2-201ENST00000331728 KRTAP9-6A8MVA2 160 aa3.06□□□□□ -1.92
LIMK2-201ENST00000331728 OBSCNQ5VST9 7968 aa3.03□□□□□ -1.92
LIMK2-201ENST00000331728 KRTAP4-7Q9BYR0 210 aa3.03□□□□□ -1.92
LIMK2-201ENST00000331728 KRTAP2-3P0C7H8 128 aa3.03□□□□□ -1.92
LIMK2-201ENST00000331728 KRTAP2-4Q9BYR9 128 aa3.03□□□□□ -1.92
LIMK2-201ENST00000331728 KRTAP2-1Q9BYU5 128 aa3.03□□□□□ -1.92
LIMK2-201ENST00000331728 LCE2AQ5TA79 106 aaPredicted RBP3.01□□□□□ -1.93
LIMK2-201ENST00000331728 CRCT1Q9UGL9 99 aa3□□□□□ -1.93
LIMK2-201ENST00000331728 KMT2DO14686 5537 aa3□□□□□ -1.93
LIMK2-201ENST00000331728 USH2AO75445 5202 aa3□□□□□ -1.93
LIMK2-201ENST00000331728 SYNE1Q8NF91 8797 aaKnown RBP3□□□□□ -1.93
LIMK2-201ENST00000331728 KRTAP19-7Q3SYF9 63 aa3□□□□□ -1.93
LIMK2-201ENST00000331728 KRTAP19-4Q3LI73 84 aa2.99□□□□□ -1.93
LIMK2-201ENST00000331728 MT1LQ93083 61 aa2.97□□□□□ -1.93
LIMK2-201ENST00000331728 FSIP2Q5CZC0 6907 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 123.4 ms