RNA–Protein interactions for RNA: ENST00000330636.8

LYRM4-201, Transcript of LYR motif containing 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LYRM4, Length 7,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM4-201ENST00000330636 KRTAP12-3P60328 96 aa3.85□□□□□ -1.79
LYRM4-201ENST00000330636 PRKDCP78527 4128 aaKnown RBP3.83□□□□□ -1.8
LYRM4-201ENST00000330636 KRTAP3-2Q9BYR7 98 aa3.82□□□□□ -1.8
LYRM4-201ENST00000330636 PLECQ15149 4684 aaKnown RBP3.77□□□□□ -1.81
LYRM4-201ENST00000330636 KRTAP3-3Q9BYR6 98 aa3.76□□□□□ -1.81
LYRM4-201ENST00000330636 ANK2Q01484 3957 aa3.76□□□□□ -1.81
LYRM4-201ENST00000330636 DNAH10Q8IVF4 4471 aa3.74□□□□□ -1.81
LYRM4-201ENST00000330636 KMT2AQ03164 3969 aa3.73□□□□□ -1.81
LYRM4-201ENST00000330636 STARD9Q9P2P6 4700 aa3.71□□□□□ -1.81
LYRM4-201ENST00000330636 DNAH1Q9P2D7 4330 aa3.7□□□□□ -1.82
LYRM4-201ENST00000330636 CMYA5Q8N3K9 4069 aa3.7□□□□□ -1.82
LYRM4-201ENST00000330636 LYSTQ99698 3801 aa3.69□□□□□ -1.82
LYRM4-201ENST00000330636 MT1HL1P0DM35 61 aa3.67□□□□□ -1.82
LYRM4-201ENST00000330636 ALMS1Q8TCU4 4167 aa3.67□□□□□ -1.82
LYRM4-201ENST00000330636 DNAH11Q96DT5 4516 aa3.66□□□□□ -1.82
LYRM4-201ENST00000330636 DNAH5Q8TE73 4624 aa3.65□□□□□ -1.83
LYRM4-201ENST00000330636 KRTAP10-4P60372 401 aaPredicted RBP3.61□□□□□ -1.83
LYRM4-201ENST00000330636 FAT1Q14517 4588 aa3.61□□□□□ -1.83
LYRM4-201ENST00000330636 KRTAP10-7P60409 375 aaPredicted RBP3.61□□□□□ -1.83
LYRM4-201ENST00000330636 VPS13DQ5THJ4 4388 aa3.59□□□□□ -1.83
LYRM4-201ENST00000330636 LORP23490 312 aaPredicted RBP3.58□□□□□ -1.84
LYRM4-201ENST00000330636 DNAH7Q8WXX0 4024 aa3.57□□□□□ -1.84
LYRM4-201ENST00000330636 LRP1BQ9NZR2 4599 aa3.57□□□□□ -1.84
LYRM4-201ENST00000330636 DYNC1H1Q14204 4646 aaKnown RBP3.53□□□□□ -1.84
LYRM4-201ENST00000330636 DNAH3Q8TD57 4116 aa3.53□□□□□ -1.85
LYRM4-201ENST00000330636 VPS13BQ7Z7G8 4022 aa3.52□□□□□ -1.85
LYRM4-201ENST00000330636 DNAH17Q9UFH2 4485 aa3.51□□□□□ -1.85
LYRM4-201ENST00000330636 FRAS1Q86XX4 4008 aa3.5□□□□□ -1.85
LYRM4-201ENST00000330636 DYNC2H1Q8NCM8 4307 aaKnown RBP3.5□□□□□ -1.85
LYRM4-201ENST00000330636 DNAH6Q9C0G6 4158 aa3.49□□□□□ -1.85
LYRM4-201ENST00000330636 FAT2Q9NYQ8 4349 aa3.49□□□□□ -1.85
LYRM4-201ENST00000330636 DNAH8Q96JB1 4490 aa3.49□□□□□ -1.85
LYRM4-201ENST00000330636 DNAH2Q9P225 4427 aa3.49□□□□□ -1.85
LYRM4-201ENST00000330636 RYR1P21817 5038 aa3.48□□□□□ -1.85
LYRM4-201ENST00000330636 SACSQ9NZJ4 4579 aa3.48□□□□□ -1.85
LYRM4-201ENST00000330636 KRTAP17-1Q9BYP8 105 aa3.47□□□□□ -1.85
LYRM4-201ENST00000330636 RYR3Q15413 4870 aa3.44□□□□□ -1.86
LYRM4-201ENST00000330636 HYDINQ4G0P3 5121 aa3.43□□□□□ -1.86
LYRM4-201ENST00000330636 PKHD1P08F94 4074 aa3.43□□□□□ -1.86
LYRM4-201ENST00000330636 KRTAP8-1Q8IUC2 63 aa3.43□□□□□ -1.86
LYRM4-201ENST00000330636 FAT3Q8TDW7 4589 aa3.42□□□□□ -1.86
LYRM4-201ENST00000330636 KIAA1109Q2LD37 5005 aa3.4□□□□□ -1.87
LYRM4-201ENST00000330636 LRP1Q07954 4544 aaKnown RBP3.39□□□□□ -1.87
LYRM4-201ENST00000330636 KMT2CQ8NEZ4 4911 aaKnown RBP3.37□□□□□ -1.87
LYRM4-201ENST00000330636 MYCBP2O75592 4640 aa3.37□□□□□ -1.87
LYRM4-201ENST00000330636 APOBP04114 4563 aaKnown RBP3.36□□□□□ -1.87
LYRM4-201ENST00000330636 HECTD4Q9Y4D8 3996 aa3.35□□□□□ -1.87
LYRM4-201ENST00000330636 LCE3CQ5T5A8 94 aa3.35□□□□□ -1.87
LYRM4-201ENST00000330636 KRTAP4-1Q9BYQ7 146 aa3.34□□□□□ -1.87
LYRM4-201ENST00000330636 KRTAP12-4P60329 112 aa3.32□□□□□ -1.88
LYRM4-201ENST00000330636 HSPG2P98160 4391 aa3.32□□□□□ -1.88
LYRM4-201ENST00000330636 KRTAP19-5Q3LI72 72 aa3.3□□□□□ -1.88
LYRM4-201ENST00000330636 RYR2Q92736 4967 aa3.29□□□□□ -1.88
LYRM4-201ENST00000330636 LCE3BQ5TA77 95 aa3.28□□□□□ -1.88
LYRM4-201ENST00000330636 HERC2O95714 4834 aa3.24□□□□□ -1.89
LYRM4-201ENST00000330636 LPAP08519 4548 aa3.24□□□□□ -1.89
LYRM4-201ENST00000330636 PKD1P98161 4303 aa3.22□□□□□ -1.89
LYRM4-201ENST00000330636 MT1HP80294 61 aa3.19□□□□□ -1.9
LYRM4-201ENST00000330636 EPPK1P58107 5090 aaKnown RBP3.19□□□□□ -1.9
LYRM4-201ENST00000330636 LRP2P98164 4655 aa3.18□□□□□ -1.9
LYRM4-201ENST00000330636 BIRC6Q9NR09 4857 aa3.16□□□□□ -1.9
LYRM4-201ENST00000330636 MT3P25713 68 aa3.14□□□□□ -1.91
LYRM4-201ENST00000330636 HERC1Q15751 4861 aa3.14□□□□□ -1.91
LYRM4-201ENST00000330636 SPRR2FQ96RM1 72 aa3.11□□□□□ -1.91
LYRM4-201ENST00000330636 KRTAP19-4Q3LI73 84 aa3.09□□□□□ -1.92
LYRM4-201ENST00000330636 MT2AP02795 61 aa3.08□□□□□ -1.92
LYRM4-201ENST00000330636 MT1GP13640 62 aa3.06□□□□□ -1.92
LYRM4-201ENST00000330636 LCE3DQ9BYE3 92 aa3.06□□□□□ -1.92
LYRM4-201ENST00000330636 MT1FP04733 61 aa3.06□□□□□ -1.92
LYRM4-201ENST00000330636 PKHD1L1Q86WI1 4243 aa3.06□□□□□ -1.92
LYRM4-201ENST00000330636 TNXBP22105 4242 aa3.04□□□□□ -1.92
LYRM4-201ENST00000330636 PRM1P04553 51 aa3.03□□□□□ -1.92
LYRM4-201ENST00000330636 SPRR2GQ9BYE4 73 aa3.03□□□□□ -1.92
LYRM4-201ENST00000330636 ABCA13Q86UQ4 5058 aa3.02□□□□□ -1.93
LYRM4-201ENST00000330636 PCLOQ9Y6V0 5065 aa3.02□□□□□ -1.93
LYRM4-201ENST00000330636 LCE3EQ5T5B0 92 aa3□□□□□ -1.93
LYRM4-201ENST00000330636 SPRR5A0A1B0GTR4 108 aa2.97□□□□□ -1.93
LYRM4-201ENST00000330636 FSIP2Q5CZC0 6907 aa2.92□□□□□ -1.94
LYRM4-201ENST00000330636 LCE2CQ5TA81 110 aa2.91□□□□□ -1.94
LYRM4-201ENST00000330636 SPRR2EP22531 72 aa2.89□□□□□ -1.95
LYRM4-201ENST00000330636 SPRR2BP35325 72 aa2.89□□□□□ -1.95
LYRM4-201ENST00000330636 SPRR2AP35326 72 aa2.89□□□□□ -1.95
LYRM4-201ENST00000330636 UBR4Q5T4S7 5183 aa2.88□□□□□ -1.95
LYRM4-201ENST00000330636 KRTAP9-8Q9BYQ0 159 aa2.87□□□□□ -1.95
LYRM4-201ENST00000330636 MUC2Q02817 5179 aa2.87□□□□□ -1.95
LYRM4-201ENST00000330636 RNF213Q63HN8 5207 aa2.84□□□□□ -1.95
LYRM4-201ENST00000330636 KRTAP19-1Q8IUB9 90 aa2.84□□□□□ -1.96
LYRM4-201ENST00000330636 KRTAP19-2Q3LHN2 52 aa2.79□□□□□ -1.96
LYRM4-201ENST00000330636 KRTAP9-2Q9BYQ4 174 aa2.78□□□□□ -1.96
LYRM4-201ENST00000330636 KRTAP4-7Q9BYR0 210 aa2.78□□□□□ -1.96
LYRM4-201ENST00000330636 SPRR2DP22532 72 aa2.77□□□□□ -1.97
LYRM4-201ENST00000330636 KRTAP9-3Q9BYQ3 159 aa2.77□□□□□ -1.97
LYRM4-201ENST00000330636 KRTAP4-8A0A0G2JLE6 195 aa2.77□□□□□ -1.97
LYRM4-201ENST00000330636 LCE2BO14633 110 aa2.77□□□□□ -1.97
LYRM4-201ENST00000330636 KRTAP4-8Q9BYQ9 185 aa2.77□□□□□ -1.97
LYRM4-201ENST00000330636 MT1XP80297 61 aa2.77□□□□□ -1.97
LYRM4-201ENST00000330636 FAT4Q6V0I7 4981 aa2.76□□□□□ -1.97
LYRM4-201ENST00000330636 MT1BP07438 61 aa2.75□□□□□ -1.97
LYRM4-201ENST00000330636 FLGP20930 4061 aaPredicted RBP2.73□□□□□ -1.97
LYRM4-201ENST00000330636 KRTAP19-8Q3LI54 63 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms